| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,183,895 | (G)7→9 | intergenic (‑79/‑42) | yohL ← / → yohM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,183,888 | 1 | . | G | 96.6% | 373.3 / 4.9 | 117 | intergenic (‑72/‑49) | yohL/yohM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base G (99/14); total (99/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.13e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01 | |||||||||||
| * | NC_000913 | 2,183,888 | 2 | . | G | 91.4% | 340.1 / 25.9 | 116 | intergenic (‑72/‑49) | yohL/yohM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base G (94/12); total (98/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.84e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
ATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCT > NC_000913/2183796‑2183976 || aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑t > 1:1942034/1‑93 (MQ=255) tCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g < 1:834178/93‑1 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g < 1:5292075/93‑1 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g < 1:2058395/93‑1 (MQ=255) aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g < 2:4288890/93‑1 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g‑‑g‑‑g > 2:3124277/1‑93 (MQ=255) aTTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g‑‑g‑‑gg‑g > 2:3437100/1‑93 (MQ=255) ttGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g‑‑g‑‑gg‑gg > 2:2266121/1‑92 (MQ=255) gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g‑‑g‑‑gg‑ggga < 2:2165985/93‑4 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑g‑‑g‑‑g‑‑g‑‑gg‑ggagt > 1:507733/1‑89 (MQ=255) aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCa > 1:4594084/1‑93 (MQ=255) gCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TG‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGAtt > 2:6386185/1‑93 (MQ=255) aaCACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTg > 2:3050620/1‑93 (MQ=255) acacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGc > 2:5298773/1‑93 (MQ=255) acacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGc > 1:3963451/1‑93 (MQ=255) cacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGcc > 1:2466791/1‑93 (MQ=255) acCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCg > 2:2714797/1‑93 (MQ=255) acCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TG‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGa > 1:4872201/1‑93 (MQ=255) cTGTTTAAAAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATAGGGCAC‑‑T‑‑‑G‑‑G‑‑GGTG‑‑GG‑GAGTAGAATCAGATTGCCGaa < 2:2150306/93‑1 (MQ=255) cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGaa > 1:2403021/1‑93 (MQ=255) aaCAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGTTGAATTAAtt > 1:2567961/1‑92 (MQ=255) aaCAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATa > 2:3920252/1‑93 (MQ=255) aCAAGATTATAAAAAATCTGAGAGCTATTGGGCTAGG‑GGGGGGTAGTATCAGGTACGGG‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATAc < 2:3407381/93‑1 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATaa > 1:2196642/1‑92 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATAc > 1:1759316/1‑93 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGTGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACt < 1:1048982/93‑1 (MQ=255) aaGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGGGG‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACt > 2:5142636/1‑93 (MQ=255) aaGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTa > 1:5882606/1‑93 (MQ=255) aggatatGAAAAATCATCGCACGATTTAGCTCGC‑GGGGAGCAGTATCAGGTTC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTaa < 2:2964352/90‑1 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTaa > 2:4740363/1‑93 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTaa > 1:223964/1‑93 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTaa > 2:5180056/1‑93 (MQ=255) gAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGGCGAATTAATAATAAg > 1:597086/1‑93 (MQ=255) gAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAg > 1:4157754/1‑93 (MQ=255) gAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAg > 2:100670/1‑93 (MQ=255) atatGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GGGAAGAATCAGATTGCCGCATTAATACTAAgca > 1:5165531/1‑91 (MQ=255) atatGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGaa > 1:4953946/1‑93 (MQ=255) atatGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGaa > 1:1256595/1‑93 (MQ=255) tatGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAat > 1:6267719/1‑93 (MQ=255) aatGAAACATCATCGCACTCTTAATCGGCT‑GGGGGGTAGTATCACGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAat < 2:5121930/92‑1 (MQ=255) tGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 2:3228682/1‑93 (MQ=255) tGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 1:6693804/1‑93 (MQ=255) tGAAAAATAATAGTGCTATTAATCTTGT‑GGGGGGGAGTATCATGTAG‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAatta < 2:3751198/93‑1 (MQ=255) tGAAAAACCATAGCACTATTAAGCTGCG‑GTGGGGTAGTATAAGGTGCGGG‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAatta < 2:6641208/93‑1 (MQ=255) taaaacTCGTAGCAGTAGTGATCCCCT‑GGGGTGTAGTATCAGGTCC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAattat < 1:5224042/92‑1 (MQ=255) aaaaaaTAATAGCAGTATTAGTCGCGG‑GGGGGAGAGGATCAGGTAG‑‑TG‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAattatt < 1:4791576/92‑1 (MQ=255) aaaaaTCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 1:4517499/1‑93 (MQ=255) aaaaTCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAAttatta > 1:3887384/1‑93 (MQ=255) aaaaTCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAAttatta > 2:1609689/1‑93 (MQ=255) aTCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCa > 1:3022836/1‑93 (MQ=255) aTCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGCAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCa > 1:4735065/1‑93 (MQ=255) tCATAGCACTATTAATCTACT‑GGGGGTTAGTATCAGGTACGGG‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCAt < 2:372530/93‑1 (MQ=255) tCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCAt > 2:3080902/1‑93 (MQ=255) tCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCAt > 1:2049546/1‑93 (MQ=255) cATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg > 2:6566401/1‑93 (MQ=255) aTAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 1:4677101/1‑93 (MQ=255) aTAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 1:3405690/1‑93 (MQ=255) tAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGAc > 1:514045/1‑93 (MQ=255) gCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCg > 1:5794118/1‑93 (MQ=255) gCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCg > 2:3920023/1‑93 (MQ=255) gCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGGAGAATCAGCTTGCCGAATTAATACTAAGAATTATTATCATGAcgg > 2:817276/1‑91 (MQ=255) aCTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGGAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGaa > 1:3562425/1‑93 (MQ=255) aCTATTAATCTACT‑GGGGGGGAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATGATGACCGat > 1:4269512/1‑92 (MQ=255) cTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 1:694103/1‑93 (MQ=255) cTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 2:6296766/1‑93 (MQ=255) tATTAATCTACTGGGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GGGTAGAATCAGATTGCGGAATTAATACTAAGAATTATTATAATGACCGAAt > 2:2386565/1‑93 (MQ=255) tATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAtt > 2:2124002/1‑93 (MQ=255) tATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAtt > 1:6543517/1‑93 (MQ=255) tATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAtt > 1:6138220/1‑93 (MQ=255) aTTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 1:6310149/1‑93 (MQ=255) ttAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa > 1:2977813/1‑93 (MQ=255) tAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTAc > 2:2085469/1‑93 (MQ=255) aaTCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 2:5393239/1‑93 (MQ=255) aTCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACaa > 1:6396778/1‑93 (MQ=255) tCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GGGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc > 2:5763677/1‑93 (MQ=255) tCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GGGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTAAAAc > 1:1573080/1‑93 (MQ=255) tCTACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGGAGAATCAGATTGCCGGATTAATACCAAAGATTATTATGATGAACGAATTTACaaa > 2:3119210/1‑92 (MQ=255) gtgcT‑GGGGGCTAGTATCAGGTGG‑‑G‑‑‑G‑‑G‑‑G‑‑GGTGG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct < 2:2445091/90‑1 (MQ=255) tgcT‑GGCGGGGAGTATCAGGTGC‑‑G‑‑‑G‑‑GT‑G‑‑G‑‑GGTGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc < 2:3251456/91‑1 (MQ=255) tACT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc > 1:1875623/1‑93 (MQ=255) aCT‑AGGGAGTAGTACGAGGTAC‑‑T‑‑‑GGCG‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct < 1:5055800/93‑1 (MQ=255) tcgggggggTGGTATCAGGTAG‑‑T‑‑‑G‑‑G‑‑GGTG‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct < 2:1607755/90‑1 (MQ=255) tcaggggggGAGTATCAGGAAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct < 1:1008938/90‑1 (MQ=255) cT‑GGGGGTTAGTAGAAGGTAT‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtctt < 2:4882266/93‑1 (MQ=255) cT‑GGGGGGTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GGGTAGAATAAGATTCCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtctt > 1:752483/1‑93 (MQ=255) cT‑GGGGGGTAGTATCAGGTAC‑‑TG‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttc > 1:4124800/1‑93 (MQ=255) t‑GGGGGGCAGTATCAGGCAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGCATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACccttc > 1:1349353/1‑93 (MQ=255) gtggggtTGGTATAAGGTAC‑‑T‑‑‑G‑‑GGTG‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttc < 1:536008/91‑1 (MQ=255) ggggggTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct > 2:433275/1‑93 (MQ=255) ggggggTAGTATCAGGTAC‑‑TG‑‑G‑‑G‑‑G‑‑G‑‑GG‑GTGTAGAATCAAATTGCCGAATTTATACTAAGAATTATTATCATGACCGAAATTAAAACTcttctt > 2:4066216/1‑93 (MQ=255) ggggTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttc > 1:3126170/1‑93 (MQ=255) ggggTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttc > 2:1005918/1‑93 (MQ=255) ggTAGTATCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCCAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg > 2:3558906/1‑93 (MQ=255) gtagtaTCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGc > 1:5755516/1‑93 (MQ=255) tagtaTCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCa > 2:1217567/1‑93 (MQ=255) agtaTCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCaa > 1:2001987/1‑93 (MQ=255) gtaTCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTTTTCTTCAGCAAg > 2:2713713/1‑93 (MQ=255) gtaTCAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAg > 2:5462790/1‑93 (MQ=255) cAGGTAC‑‑TGG‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaaa > 2:4900136/1‑93 (MQ=255) aatgt‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt < 1:62311/89‑1 (MQ=255) || ATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACT‑GGGGGGTAGTATCAGGTAC‑‑T‑‑‑G‑‑G‑‑G‑‑G‑‑GG‑GAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCT > NC_000913/2183796‑2183976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |