| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,501,888 | +C | coding (618/2496 nt) | b2383 ← | putative PTS system enzyme IIA component, enzyme I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,501,884 | 1 | . | C | 98.6% | 690.9 / 1.2 | 216 | coding (622/2496 nt) | b2383 | putative PTS system enzyme IIA component, enzyme I |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (112/101); total (114/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑C‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 | aaTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGGGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAg > 1:583336/1‑93 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 1:1232220/1‑93 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c > 2:3583411/1‑93 (MQ=255) gTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cc > 2:6267662/1‑93 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccc < 1:201130/93‑2 (MQ=255) cTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctg > 1:2993591/1‑90 (MQ=255) cTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c‑cccctg < 1:4706617/93‑4 (MQ=255) cacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGc < 2:2090445/93‑1 (MQ=255) acGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCt > 1:171185/1‑93 (MQ=255) cGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTg > 2:1178313/1‑93 (MQ=255) gTTCGCGCAGAGAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCCCCCCCAGCC‑CCCTGATGCTGt < 2:3059040/93‑1 (MQ=255) ttCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGtt > 1:2468164/1‑93 (MQ=255) tCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTc < 2:4427810/93‑1 (MQ=255) cgcAAATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCTCCCCCAGCC‑CCCTGATGCTGTTCTGt < 1:603450/93‑1 (MQ=255) gcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtc < 2:3641011/93‑1 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatc < 1:4929847/93‑1 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatc > 1:5245073/1‑93 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatc > 2:1903372/1‑93 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGtcatc > 2:6065012/1‑93 (MQ=255) tAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAg < 1:5033787/93‑1 (MQ=255) tAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAg > 2:738255/1‑93 (MQ=255) aTCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCTCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGc > 2:3969549/1‑93 (MQ=255) aTCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGc > 1:2348023/1‑93 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCg > 1:2909661/1‑93 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCg > 2:1515947/1‑93 (MQ=255) cGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGa < 2:1395145/93‑1 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGAc > 1:2611884/1‑93 (MQ=255) cTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACg > 1:378134/1‑93 (MQ=255) cTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACg > 2:3841620/1‑93 (MQ=255) ggcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGa < 1:6647423/93‑1 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGat < 2:2495660/93‑1 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCCGTTCTGTCATCAGGCGACGGat < 2:4646556/93‑1 (MQ=255) gcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CATCCTGATGCTGTTCTGTCATCAGGCGACGGat > 1:4897378/1‑93 (MQ=255) agaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGatat > 2:6178111/1‑93 (MQ=255) gaggcagaGAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 2:2534635/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt < 2:6388955/93‑1 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt < 1:1108314/93‑1 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 1:5168640/1‑93 (MQ=255) aggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTg > 2:5067389/1‑93 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGc > 2:6198148/1‑93 (MQ=255) agaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTg > 1:2759571/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:534155/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:4181161/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:722029/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc > 1:6689756/1‑93 (MQ=255) aaaaTTTTTGCGCAAACCTGCTCCATATGGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc < 1:3590472/92‑1 (MQ=255) aaaGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCa > 2:1631359/1‑93 (MQ=255) gTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAt > 2:4567576/1‑93 (MQ=255) tttGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAtt > 1:3610493/1‑93 (MQ=255) tttGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAtt > 1:4360779/1‑93 (MQ=255) tGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtca < 2:5013182/93‑1 (MQ=255) tGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtca < 2:6620578/93‑1 (MQ=255) gcgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatc > 1:392831/1‑93 (MQ=255) gcgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatc > 2:1416253/1‑93 (MQ=255) gcgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatc > 1:4058188/1‑93 (MQ=255) cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatca < 2:3448976/93‑1 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat > 2:2051620/1‑93 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat > 1:4815472/1‑93 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc > 1:3852029/1‑93 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 2:302076/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 2:95117/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 1:5124508/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt < 1:3206216/93‑1 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 1:1794610/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 1:5941790/1‑93 (MQ=255) aCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTg > 2:3340789/1‑93 (MQ=255) ccTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGa > 2:1330940/1‑93 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa < 2:5530433/93‑1 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa < 2:4099245/93‑1 (MQ=255) tGCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAAt > 1:5411776/1‑93 (MQ=255) gCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATc < 1:1343593/93‑1 (MQ=255) gCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATc > 2:6409405/1‑93 (MQ=255) gCTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATc < 2:5321470/93‑1 (MQ=255) cTCCATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa < 2:5810363/93‑1 (MQ=255) cATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCg > 2:4118708/1‑93 (MQ=255) cATATTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCg > 2:5636975/1‑93 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 1:2233731/1‑93 (MQ=255) atTGCTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACa < 1:1563779/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 2:5783696/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCACCATCCTGAATCAGCGACAAATg > 1:302936/1‑93 (MQ=255) tgatgaTCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATgg < 2:2899901/93‑1 (MQ=255) tgatgaTCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATgg < 1:6336373/93‑1 (MQ=255) tgatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcg > 2:6580846/1‑93 (MQ=255) gatCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc > 2:6453138/1‑93 (MQ=255) atCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCt < 1:1147681/93‑1 (MQ=255) atCGCCGCCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCt < 2:2690501/93‑1 (MQ=255) cgccgcCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGa < 2:2233735/93‑1 (MQ=255) cgccgcCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGa > 2:1291879/1‑93 (MQ=255) cgccgcCCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGa < 2:670314/93‑1 (MQ=255) gccgccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAg < 1:88252/93‑1 (MQ=255) ccgccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAgg < 2:4784445/93‑1 (MQ=255) ccgccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAgg < 1:4629209/93‑1 (MQ=255) gccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt > 1:5904476/1‑93 (MQ=255) gccCCCAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt > 1:3707096/1‑93 (MQ=255) ccccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGAt < 2:1152406/92‑1 (MQ=255) cccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATa > 2:4456017/1‑93 (MQ=255) cccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATa < 2:3693830/93‑1 (MQ=255) cccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATa < 1:3995059/93‑1 (MQ=255) ccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg < 2:1753160/93‑1 (MQ=255) ccccAGCC‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg < 1:3727866/93‑1 (MQ=255) | AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑C‑CCCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |