| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 309,281 | (G)6→7 | intergenic (‑31/+27) | yagY ← / ← yagZ | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 309,275 | 1 | . | G | 92.9% | 682.3 / 43.6 | 225 | intergenic (‑25/+33) | yagY/yagZ | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (5/11); new base G (126/82); total (132/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 266 total aligned reads displayed.
ACATCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCT > NC_000913/309183‑309362 | aCATCCGGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCa < 2:2728745/93‑1 (MQ=255) cATCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g < 2:5301763/93‑1 (MQ=255) cATCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g > 2:2639193/1‑93 (MQ=255) aTCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑g < 2:4305664/93‑1 (MQ=255) tCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑gg < 2:3006583/93‑1 (MQ=255) tCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑gg < 1:5217758/93‑1 (MQ=255) ccAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg < 2:663990/93‑1 (MQ=255) ccAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg > 1:5745394/1‑93 (MQ=255) cAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑g < 1:118067/93‑1 (MQ=255) cAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑g < 1:6059173/93‑1 (MQ=255) gcgcCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑ggg > 2:3804614/1‑92 (MQ=255) gcgcCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGc > 1:961682/1‑93 (MQ=255) cgcCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑gggc < 1:4971991/93‑3 (MQ=255) gcCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑gggct > 1:2378582/1‑90 (MQ=255) gcCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑g‑ggg‑gggct > 2:93953/1‑90 (MQ=255) gggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAccc < 1:5461322/93‑1 (MQ=255) gggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAccc > 1:3879573/1‑93 (MQ=255) gggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAccc > 1:1505346/1‑93 (MQ=255) gggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTAcccc < 2:350771/93‑1 (MQ=255) ggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAcccc < 2:2365604/93‑1 (MQ=255) ggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAcccc < 1:3735049/93‑1 (MQ=255) ggCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTAcccc < 1:4431267/93‑1 (MQ=255) cGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCctgc > 1:4889481/1‑93 (MQ=255) ggAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCctgct > 1:1455595/1‑93 (MQ=255) ggAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCctgct > 2:5517674/1‑93 (MQ=255) gaTATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGt > 2:4526998/1‑93 (MQ=255) tatTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTAc < 2:867499/93‑1 (MQ=255) tatTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTAc > 2:759073/1‑93 (MQ=255) atTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACa > 1:2774944/1‑93 (MQ=255) atTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACa < 2:6338972/93‑1 (MQ=255) atTCCGGAAAACAGCAGAGAGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACa < 1:5584474/93‑1 (MQ=255) tCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATc < 1:1311977/93‑1 (MQ=255) cGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCaga < 1:4531719/93‑1 (MQ=255) ggAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCaga < 1:722012/93‑1 (MQ=255) aaaCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCagagag < 2:361255/93‑1 (MQ=255) aaaCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCagagag > 1:6665884/1‑93 (MQ=255) aaaCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAgagaga < 2:341203/93‑1 (MQ=255) aCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGAt > 1:189419/1‑93 (MQ=255) aCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGAt < 2:4735630/93‑1 (MQ=255) aCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGAt < 1:778710/93‑1 (MQ=255) aCAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGAt > 2:811509/1‑93 (MQ=255) agcagAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTa > 1:515563/1‑93 (MQ=255) agcagAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTa > 2:5006048/1‑93 (MQ=255) cagAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAAc < 1:3509787/93‑1 (MQ=255) agagCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACt < 1:1255888/93‑1 (MQ=255) agagCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACt > 2:4866454/1‑93 (MQ=255) gagCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTg > 2:2984261/1‑93 (MQ=255) gagCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTg > 1:1675192/1‑93 (MQ=255) gagCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTg > 2:5412352/1‑93 (MQ=255) agCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTgg < 1:3392797/93‑1 (MQ=255) cGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTACCTGGTc < 1:3315502/93‑1 (MQ=255) gagaGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTcc < 2:3922401/93‑1 (MQ=255) gagaGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTcc > 2:1679556/1‑93 (MQ=255) agagGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCa > 2:6184627/1‑93 (MQ=255) agagGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCa > 1:2668722/1‑93 (MQ=255) agGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAgg > 1:4092146/1‑93 (MQ=255) ggCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGt < 2:511928/93‑1 (MQ=255) ggCAGAAGATGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGt > 1:6547199/1‑93 (MQ=255) aGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTcgc < 1:4120032/93‑1 (MQ=255) aGAAGGCGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTcgc > 1:538121/1‑93 (MQ=255) gAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTcgcg > 2:1971744/1‑93 (MQ=255) gAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTcgcg > 1:2306764/1‑93 (MQ=255) gAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTcgcg > 1:3243671/1‑93 (MQ=255) aaGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGt > 1:3199632/1‑93 (MQ=255) aaGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGt > 1:4789223/1‑93 (MQ=255) aaGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTc > 2:2284563/1‑93 (MQ=255) aGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTc > 1:6190654/1‑93 (MQ=255) aGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTc > 1:2262069/1‑93 (MQ=255) aGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCg > 1:3695762/1‑93 (MQ=255) tGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGaa > 2:2869386/1‑93 (MQ=255) gCTTTTTCATAATATTTCCGGCCAGGAATAAAGCA‑G‑GGGATTCTCCCCCTCCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAAc < 1:1984787/93‑1 (MQ=255) ttttCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGt > 2:1347651/1‑93 (MQ=255) ttttCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGt > 2:4666866/1‑93 (MQ=255) ttttCATAACAATTCCGTCCAGGAATAAAGCA‑GTGGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAGCTGGTCCAGGTCGCGTCGAACTGt < 1:504598/93‑1 (MQ=255) ttCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTAc > 1:1550221/1‑93 (MQ=255) tCATAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACg > 2:3216247/1‑93 (MQ=255) tCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGc < 2:3838995/93‑1 (MQ=255) aTAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCt > 1:5429601/1‑93 (MQ=255) aTAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCt > 2:5144648/1‑93 (MQ=255) tAACAATTGCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGGCGCGTCGAACTGTACGCTa > 1:6529274/1‑93 (MQ=255) tAACAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTa < 1:2944127/93‑1 (MQ=255) aCAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAAc < 1:6352550/93‑1 (MQ=255) aCAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAAc > 2:6051035/1‑93 (MQ=255) cAATTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTAAATCAGAGAGATTACTTGGCCAAGGGCGGGTCGATCTTTACGCTACCg > 2:1446200/1‑93 (MQ=255) aaTTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGt > 2:4659611/1‑93 (MQ=255) aaTTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGt > 2:1066860/1‑93 (MQ=255) aaTTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGt < 1:1038730/93‑1 (MQ=255) aTTCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTc > 2:5741236/1‑93 (MQ=255) ttCCGTCCAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTcg > 2:1562019/1‑93 (MQ=255) cAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTcc > 2:1646598/1‑93 (MQ=255) cAGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTcc > 1:5569204/1‑93 (MQ=255) aGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCa > 2:5655415/1‑93 (MQ=255) aGGAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCa > 2:6216481/1‑93 (MQ=255) ggAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAg > 2:6575850/1‑93 (MQ=255) ggAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGACGCTCCAg > 1:927195/1‑93 (MQ=255) gAATAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGa < 2:4598468/93‑1 (MQ=255) aaTAAAGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGAt > 2:249801/1‑93 (MQ=255) tAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGcc < 2:4813149/93‑1 (MQ=255) aaaGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGcc < 2:589355/93‑1 (MQ=255) aaaGCAGG‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGcc < 1:1848571/93‑1 (MQ=255) | ACATCCAGCGCCTGGGCCGGAGATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCA‑G‑GGG‑GGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCT > NC_000913/309183‑309362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |