BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,729,373	+C	intergenic (‑195/+247)	rrsG ← / ← clpB	16S ribosomal RNA/ClpB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,729,371	1	.	C	98.0%	453.8 / 2.1	153	intergenic (‑193/+249)	rrsG/clpB	16S ribosomal RNA/ClpB
Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (67/83); total (68/85)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 154 total aligned reads displayed.

AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTT  >  NC_000913/2729307‑2729458

aaaTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGc                                                              <  2:2485202/93‑1 (MQ=0)

 aaTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCt                                                             <  2:6281979/93‑1 (MQ=0)

  aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt                                                            >  2:6486576/1‑93 (MQ=9)

  aTTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCtt                                                            <  2:1418509/93‑1 (MQ=12)

   ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt                                                           <  2:1054991/93‑1 (MQ=12)

   ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt                                                           <  2:3842323/93‑1 (MQ=12)

   ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt                                                           <  1:171485/93‑1 (MQ=16)

   ttGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCttt                                                           <  1:5382069/93‑1 (MQ=16)

    tGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑CACGCTACAGAGTCAAGCATTTCTTTGCtttt                                                          >  2:3764227/1‑93 (MQ=255)

     gTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtc                                                         >  1:1443912/1‑93 (MQ=255)

     gTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtc                                                         >  1:1806729/1‑93 (MQ=255)

      ttAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtct                                                        <  2:3363904/93‑1 (MQ=255)

      ttAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtct                                                        <  2:2313768/93‑1 (MQ=255)

       tAAAGAGCTGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACCGAGTCAAGCATTTCTTTGCTTTtctc                                                       >  1:6520958/1‑93 (MQ=11)

       tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc                                                       <  2:2873378/93‑1 (MQ=255)

       tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc                                                       >  2:4779651/1‑93 (MQ=255)

       tAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTtctc                                                       <  2:6564823/93‑1 (MQ=255)

        aaaGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTctct                                                      <  1:1626014/93‑1 (MQ=255)

         aaGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTg                                                     >  1:478617/1‑93 (MQ=255)

          agagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGt                                                    >  2:2531863/1‑93 (MQ=255)

          agagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGt                                                    <  1:4452456/93‑1 (MQ=255)

           gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt                                                   >  2:874382/1‑93 (MQ=255)

           gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGtt                                                   >  2:3118265/1‑93 (MQ=255)

           gagCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGGGTGCATAATACGCCT‑TCC‑CGCTACAGAGGCAAGCATTTCTTTGCTTTTCTCTGtt                                                   >  1:5752441/1‑93 (MQ=14)

            agCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTg                                                  <  2:568722/93‑1 (MQ=255)

             gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga                                                 <  1:1018616/93‑1 (MQ=255)

             gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTga                                                 <  1:3779251/93‑1 (MQ=255)

             gCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCGGTTga                                                 <  1:595951/93‑1 (MQ=255)

              cAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag                                                <  2:2747823/93‑1 (MQ=255)

              cAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgag                                                >  1:5155983/1‑93 (MQ=255)

               aGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga                                               <  1:3351085/93‑1 (MQ=255)

               aGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTgaga                                               <  1:270314/93‑1 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              <  2:681227/93‑1 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              <  1:5558760/93‑1 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              <  2:518835/93‑1 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              <  1:2615284/93‑1 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              >  1:3051118/1‑93 (MQ=255)

                gTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAt                                              <  2:2765182/93‑1 (MQ=255)

                 tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt                                             <  1:4800809/93‑1 (MQ=255)

                 tGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAtt                                             <  1:915638/93‑1 (MQ=255)

                  gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGAttt                                            >  1:4911845/1‑92 (MQ=255)

                  gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc                                            <  1:927253/93‑1 (MQ=255)

                  gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc                                            <  2:5314155/93‑1 (MQ=255)

                  gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc                                            <  2:5905973/93‑1 (MQ=255)

                  gCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtc                                            <  1:5845799/93‑1 (MQ=255)

                   ccGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtct                                           >  2:287844/1‑93 (MQ=255)

                    cgcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATtctc                                          >  2:4035063/1‑93 (MQ=255)

                     gcttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCa                                         <  2:2170675/93‑1 (MQ=255)

                      cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg                                        >  2:2446600/1‑93 (MQ=255)

                      cttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAg                                        >  1:105216/1‑93 (MQ=255)

                       ttcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAgg                                       <  2:581031/93‑1 (MQ=255)

                        tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga                                      >  1:3277417/1‑93 (MQ=255)

                        tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga                                      >  1:4163373/1‑93 (MQ=255)

                        tcgcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGga                                      <  1:5663140/93‑1 (MQ=255)

                          gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga                                    >  1:2310098/1‑93 (MQ=255)

                          gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga                                    >  2:4352199/1‑93 (MQ=255)

                          gcttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGgaga                                    >  2:1215872/1‑93 (MQ=255)

                           cttTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGaa                                   <  1:1212680/93‑1 (MQ=255)

                            tttttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAc                                  >  2:1967578/1‑93 (MQ=255)

                             ttttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcc                                 >  2:5526932/1‑93 (MQ=255)

                              tttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAccc                                <  1:6643309/93‑1 (MQ=255)

                               ttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc                               <  1:4993478/93‑1 (MQ=255)

                               ttCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAAcccc                               >  1:395639/1‑93 (MQ=255)

                                tctcAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccg                              >  1:1883265/1‑93 (MQ=255)

                                 ctcAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgc                             <  1:2974898/93‑1 (MQ=255)

                                 ctcAGCGGCGCGGGGTGTACATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgc                             <  1:5544435/93‑1 (MQ=255)

                                  tcAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgcc                            >  2:3586921/1‑93 (MQ=255)

                                  tcAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgcc                            >  1:5844368/1‑93 (MQ=255)

                                   cAGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCccgccg                           >  2:2072349/1‑93 (MQ=255)

                                    aGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGa                          >  2:1021778/1‑93 (MQ=255)

                                    aGCGGCGCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGa                          <  1:2929406/93‑1 (MQ=255)

                                       ggcgCGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGAccc                       <  1:3508629/93‑1 (MQ=255)

                                        gcgcGGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcg                      >  2:6626076/1‑93 (MQ=255)

                                         cgcgGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg                     <  2:5773176/93‑1 (MQ=255)

                                         cgcgGGGTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcgg                     <  2:5462922/93‑1 (MQ=255)

                                            ggggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCcggcgg                  <  1:6040113/93‑1 (MQ=255)

                                             gggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCggcggc                 >  1:1687044/1‑93 (MQ=255)

                                              ggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGgcggcg                <  2:188447/93‑1 (MQ=255)

                                              ggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGgcggcg                <  1:3362885/93‑1 (MQ=255)

                                              ggTGTGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGgcggcg                <  1:4705337/93‑1 (MQ=255)

                                               gtgtGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt               <  2:2277747/93‑1 (MQ=255)

                                               gtgtGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt               >  1:4896803/1‑93 (MQ=255)

                                               gtgtGCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgt               >  1:3038076/1‑93 (MQ=255)

                                                tgtgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCgtg              <  1:6558029/93‑1 (MQ=255)

                                                  tgCATAATACGCCTCC‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt            <  2:4713824/93‑1 (MQ=255)

                                                  tgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt            <  1:6219408/93‑1 (MQ=255)

                                                  tgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt            <  2:5984987/93‑1 (MQ=255)

                                                  tgCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGtt            <  2:3880265/93‑1 (MQ=255)

                                                   gCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCCGGCGGCGTGttt           <  1:321772/93‑1 (MQ=255)

                                                   gCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGttt           >  2:3402028/1‑93 (MQ=255)

                                                   gCATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGttt           >  1:1445169/1‑93 (MQ=255)

                                                    cATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTg          <  1:1569140/93‑1 (MQ=255)

                                                    cATAATACGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGCGTTTg          >  1:4225947/1‑93 (MQ=255)

                                                       aataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCg       >  1:1775937/1‑93 (MQ=255)

                                                        ataCGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgt      >  2:6731527/1‑93 (MQ=255)

                                                           cGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGACCCCCGCCGACCCGGCGGCGTGTTTGCCgttgt   <  2:3483250/93‑1 (MQ=255)

                                                           cGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttgt   <  1:2281824/93‑1 (MQ=255)

                                                           cGCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttgt   >  1:5941814/1‑93 (MQ=255)

                                                            gCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttgtt  >  2:3234066/1‑93 (MQ=255)

                                                            gCCT‑TCC‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCgttgtt  <  1:1295807/93‑1 (MQ=255)

AAATTGTTAAAGAGCAGTGCCGCTTCGCTTTTTCTCAGCGGCGCGGGGTGTGCATAATACGCCT‑T‑C‑CGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTT  >  NC_000913/2729307‑2729458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`