BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,075,220	(T)_5→6	coding (256/357 nt)	yggP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,075,215	1	.	T	99.0%	774.3 / ‑1.3	208	coding (261/357 nt)	yggP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/0); new base T (121/85); total (123/85)
Fisher's exact test for biased strand distribution p-value = 5.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 246 total aligned reads displayed.

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGcc                                                                                          >  2:1164300/1‑93 (MQ=255)

ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGcc                                                                                          <  1:2055738/93‑1 (MQ=255)

ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCAGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGcc                                                                                          <  2:3566049/93‑1 (MQ=255)

 taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑t                                                                                        <  2:4217132/93‑1 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tt                                                                                       >  2:3476112/1‑93 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCAGCTGAATATCCGCTTGGTAAACCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tt                                                                                       >  2:5223809/1‑93 (MQ=255)

   aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttt                                                                                      >  2:3054289/1‑93 (MQ=255)

   aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttt                                                                                      >  1:2402155/1‑93 (MQ=255)

   aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttt                                                                                      >  1:5169982/1‑93 (MQ=255)

   aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttt                                                                                      >  1:5221059/1‑93 (MQ=255)

    gTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tttt                                                                                     >  1:5895867/1‑93 (MQ=255)

    gTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tttt                                                                                     <  2:5687412/93‑1 (MQ=255)

     tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttttt                                                                                    <  1:6067502/93‑1 (MQ=255)

     tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttttt                                                                                    >  1:3361072/1‑93 (MQ=255)

       gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tttttta                                                                                  <  1:4761686/93‑3 (MQ=255)

       gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑tttttta                                                                                  <  1:4905030/93‑3 (MQ=255)

         aTTGCCGCCAAAATATTCGTAGCTGTAGCTCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttttttata                                                                                >  2:1019404/1‑89 (MQ=255)

         aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑ttttttata                                                                                >  2:6611583/1‑89 (MQ=255)

           tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATAtt                                                                               <  2:386477/93‑1 (MQ=255)

            gccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATAttt                                                                              >  1:4814512/1‑93 (MQ=255)

             ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTg                                                                             <  1:2160299/93‑1 (MQ=255)

              cgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGc                                                                            <  2:3657051/93‑1 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGcc                                                                           >  2:5380177/1‑93 (MQ=255)

                ccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCa                                                                          <  2:5207282/93‑1 (MQ=255)

                 cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAg                                                                         >  2:648589/1‑93 (MQ=255)

                 cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAg                                                                         >  2:3965648/1‑93 (MQ=255)

                    aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGGCT‑TTTTTATATTTGCCAGTga                                                                      >  1:352198/1‑93 (MQ=255)

                    aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTga                                                                      >  1:5772482/1‑93 (MQ=255)

                    aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCAGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTga                                                                      >  2:3815061/1‑93 (MQ=255)

                      tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTgaga                                                                    <  2:4567723/93‑1 (MQ=255)

                       atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGAt                                                                   >  2:2402782/1‑93 (MQ=255)

                       atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGAt                                                                   <  1:2716085/93‑1 (MQ=255)

                        ttCGTAGCTGTAGCGCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGAtt                                                                  <  1:4625830/93‑1 (MQ=255)

                           gtggCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGAttttt                                                               >  2:3168407/4‑93 (MQ=255)

                           gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGAttttt                                                               >  1:6402025/1‑93 (MQ=255)

                             aGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTAc                                                             >  2:5469141/1‑93 (MQ=255)

                             aGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTAc                                                             >  2:2806858/1‑93 (MQ=255)

                              gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTAcc                                                            >  1:5033629/1‑93 (MQ=255)

                              gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTAcc                                                            >  1:2612293/1‑93 (MQ=255)

                                tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTAccaa                                                          >  2:2775928/1‑91 (MQ=255)

                                  tAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACt                                                        <  2:5992703/93‑1 (MQ=255)

                                   aGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACtt                                                       >  1:942682/1‑93 (MQ=255)

                                   aGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACtt                                                       <  1:1391126/93‑1 (MQ=255)

                                   aGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACtt                                                       >  1:4679269/1‑93 (MQ=255)

                                    gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTc                                                      >  1:3021784/1‑93 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                   >  1:3132227/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  <  1:4372290/93‑1 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  >  1:4977023/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  <  2:485202/93‑1 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  >  2:471785/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  >  2:1858338/1‑93 (MQ=255)

                                         cTGAATATCCGCTTTGTACCCCCACCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTCAGATTTTTACCCACTTCGACaa                                                 <  1:5300106/93‑1 (MQ=255)

                                          tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt                                                >  2:4595320/1‑93 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              <  1:6080901/93‑1 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              <  1:1744131/93‑1 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              <  1:1801660/93‑1 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              >  1:5128912/1‑93 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              >  2:6124842/1‑93 (MQ=255)

                                                tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                          <  2:4824123/93‑1 (MQ=255)

                                                    cTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGca                                      >  2:1614901/1‑93 (MQ=255)

                                                     ttGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTTGACAATAACCCCGGcac                                     <  1:142605/93‑1 (MQ=255)

                                                     ttGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGcac                                     >  2:6175337/1‑93 (MQ=255)

                                                       ggTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAt                                   <  2:447844/93‑1 (MQ=255)

                                                         tAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTc                                 <  1:3649894/93‑1 (MQ=255)

                                                          aaCCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                >  2:795516/1‑93 (MQ=255)

                                                          aaCCCCAGCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                <  1:1225372/93‑1 (MQ=255)

                                                           aCCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               <  2:1771622/93‑1 (MQ=255)

                                                           aCCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               >  2:1395814/1‑93 (MQ=255)

                                                           aCCCCATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               >  1:3115105/1‑93 (MQ=255)

                                                            ccccATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATg                              <  1:129567/93‑1 (MQ=255)

                                                            ccccATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATg                              >  1:6528317/1‑93 (MQ=255)

                                                             cccATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc                             >  1:5354260/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            >  2:4039458/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            <  2:980564/93‑1 (MQ=255)

                                                                aTCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          >  1:5550065/1‑93 (MQ=255)

                                                                aTCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          >  2:2148158/1‑93 (MQ=255)

                                                                 tCGCCGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACACCGGCACATTCATGCCCgg                         >  1:1329246/1‑93 (MQ=255)

                                                                    ccGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa                      <  2:1085737/93‑1 (MQ=255)

                                                                    ccGGTTCCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGCGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa                      <  2:2978263/93‑1 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     >  1:3483518/1‑93 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     <  2:4259340/93‑1 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAACCCGGCACATTCATGCCCGGTAAt                     >  2:2519311/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                   <  1:722683/93‑1 (MQ=255)

                                                                       gTTGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                   >  1:3746791/1‑93 (MQ=255)

                                                                        ttGCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                  <  1:4652740/93‑1 (MQ=255)

                                                                          gCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                >  2:2318896/1‑93 (MQ=255)

                                                                          gCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                <  2:683479/93‑1 (MQ=255)

                                                                          gCAATACAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                >  1:4541033/1‑93 (MQ=255)

                                                                            aaTACAAAACGAT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga              >  1:5444117/1‑93 (MQ=255)

                                                                                cAAAACGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatgat          >  2:3295629/1‑93 (MQ=255)

                                                                                 aaaaCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCGCGGTAATGACCGGATGAtt         >  1:4171027/1‑93 (MQ=255)

                                                                                 aaaaCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt         >  1:690858/1‑93 (MQ=255)

                                                                                  aaaCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATTCCCGGTAATGACCTGATGAttt        >  1:3285760/1‑93 (MQ=255)

                                                                                  aaaCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt        >  2:862571/1‑93 (MQ=255)

                                                                                   aaCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt       >  1:4010937/1‑93 (MQ=255)

                                                                                    aCGCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc      >  2:2033666/1‑93 (MQ=255)

                                                                                      gCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa    >  2:6017092/1‑93 (MQ=255)

                                                                                      gCT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa    >  1:2270085/1‑93 (MQ=255)

                                                                                       cT‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa   >  1:3782010/1‑93 (MQ=255)

                                                                                        t‑GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa  >  1:896737/1‑93 (MQ=255)

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCT‑GGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`