| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,537,405 | +GC | intergenic (+61/‑394) | b3407 → / → feoA | hypothetical protein/ferrous iron transport protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,537,404 | 1 | . | C | 99.6% | 825.8 / ‑5.9 | 258 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base C (133/122); minor base T (0/1); total (133/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 3,537,404 | 2 | . | G | 99.6% | 830.7 / ‑4.8 | 258 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base G (132/124); minor base T (1/0); total (133/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 283 total aligned reads displayed.
GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑C‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCAT > NC_000913/3537312‑3537486 || cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑c > 2:1781796/1‑93 (MQ=255) cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑c > 2:3890975/1‑93 (MQ=255) gcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cg > 1:941493/1‑92 (MQ=255) cTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgc < 1:4195117/93‑3 (MQ=255) ggcggcggcAGTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgccg < 1:3900514/93‑5 (MQ=255) ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgccg < 1:5840236/93‑5 (MQ=255) ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgccg > 2:4620130/1‑89 (MQ=255) ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgccg > 1:1900724/1‑89 (MQ=255) ggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTg > 1:3990944/1‑93 (MQ=38) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCa > 1:2777413/1‑93 (MQ=37) aaTGGGAAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCa < 1:5762673/93‑1 (MQ=37) aTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaa > 2:4003725/1‑93 (MQ=37) tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaac > 1:2941682/1‑93 (MQ=37) ggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaacga < 2:2880458/93‑1 (MQ=38) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaacgaa < 2:6594218/93‑1 (MQ=38) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaacgaac < 2:1107330/93‑1 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCaacgaacg > 2:4791266/1‑93 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGc > 1:53248/1‑93 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGc > 1:5157604/1‑93 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGc > 1:3206863/1‑93 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGc > 1:338996/1‑93 (MQ=37) aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCCACGAACGcc > 1:6249906/1‑93 (MQ=37) aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGcc > 1:5705026/1‑93 (MQ=37) aaaCGTTAACCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCt < 1:3170630/93‑1 (MQ=37) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCATGC‑C‑GCATCTGGAAACGAACGCCt < 2:193431/93‑1 (MQ=38) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCt < 2:785351/93‑1 (MQ=37) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCt < 2:559653/93‑1 (MQ=37) aaaCGTTAAACGCCCGTACTGGCCTACGGCTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCt < 2:4290483/93‑1 (MQ=37) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCtt > 2:3544080/1‑93 (MQ=37) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCtt < 2:6356491/93‑1 (MQ=37) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTg > 1:2310889/1‑93 (MQ=37) cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGc > 2:3161679/1‑93 (MQ=37) cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGc > 2:5413114/1‑93 (MQ=37) gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGcc < 2:6262046/93‑1 (MQ=37) ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCt > 2:6053175/1‑93 (MQ=38) aagcGCCCGTACTGCCGTACGGTTCAATTTAGCACGAATTCGGAGGGCAGATAGGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGa < 2:2304466/90‑1 (MQ=16) aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGAc > 2:4228074/1‑93 (MQ=37) aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGAc > 2:503491/1‑93 (MQ=38) aaCGCCCAGACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGAc > 1:6609044/1‑93 (MQ=37) aCGCCGTTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACa < 2:2799470/93‑1 (MQ=25) aCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACa < 1:4627918/93‑1 (MQ=37) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTCACAtta > 1:489853/1‑91 (MQ=37) ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATaaa > 2:6520883/1‑93 (MQ=38) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAg > 1:5993073/1‑93 (MQ=37) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAg < 2:4476671/93‑1 (MQ=37) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGt < 1:537905/93‑1 (MQ=37) aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg < 2:3655830/93‑1 (MQ=37) aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg > 2:2215938/1‑93 (MQ=37) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc > 1:6343286/1‑93 (MQ=38) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc > 2:554081/1‑93 (MQ=38) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc < 1:2434961/93‑1 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGTCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 1:2531837/93‑1 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 1:2080163/93‑1 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc > 2:1691501/1‑93 (MQ=38) ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg > 2:5322414/1‑93 (MQ=37) tACGGTTCTAATTTGCACGAAATCGTGGGGCAAATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga < 1:1552265/93‑1 (MQ=37) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGggga > 2:1297606/1‑93 (MQ=37) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 2:2232581/1‑93 (MQ=38) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 2:2633005/1‑93 (MQ=37) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 2:4855727/1‑93 (MQ=38) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga < 1:1075096/93‑1 (MQ=37) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 1:1726411/1‑93 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa < 2:2992182/93‑1 (MQ=37) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa < 2:310240/93‑1 (MQ=37) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGGGAatat > 2:32916/1‑93 (MQ=37) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:1674507/1‑93 (MQ=38) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 2:5213723/1‑93 (MQ=38) cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc > 1:1311455/1‑93 (MQ=38) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 2:6681520/93‑1 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc > 1:5897069/1‑93 (MQ=38) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑CGCGGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 1:6662093/93‑1 (MQ=37) ttGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCa < 2:3776455/93‑1 (MQ=38) tGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAt < 1:3014121/93‑1 (MQ=38) cACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt < 1:4120386/93‑1 (MQ=38) cACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCAGAGAATATCTCCGGCAttt < 1:6537442/93‑1 (MQ=37) aCGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt < 1:1770455/93‑1 (MQ=38) cGAAATCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCCGCCttttt > 1:215811/1‑93 (MQ=37) aaaTCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAt > 1:1493865/1‑93 (MQ=38) aaTCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAtt < 2:1867626/93‑1 (MQ=38) aaTCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAtt > 1:860460/1‑93 (MQ=38) aaTCGTAGGGAAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAtt < 1:82027/93‑1 (MQ=38) aTCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc < 2:5105284/93‑1 (MQ=38) tCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTcc > 1:1108771/1‑93 (MQ=38) tCGTAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTcc < 2:5877512/93‑1 (MQ=38) aggTAGGCCAGATACGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCATTGCCTGACATAAAACTGCCGGAGAATATCTCCGGCATTTTTATTcc < 1:3713527/91‑1 (MQ=25) tAGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCCGAGAATATCTCCGGCATTTTTATTCcaca > 2:5757712/1‑93 (MQ=38) aGGGCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg > 2:1645011/1‑93 (MQ=38) gggCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTACGGCATTTTTATTCCACAGc > 1:2681439/1‑93 (MQ=38) ggCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGcc > 2:5342805/1‑93 (MQ=38) gCAGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa < 2:3379896/93‑1 (MQ=38) aGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa < 1:1838252/93‑1 (MQ=38) aGATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa > 2:4427472/1‑93 (MQ=38) gATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGGATATCTCCCGCATTTTTATTCCACAGCCAAAc > 2:4756386/1‑93 (MQ=37) gATAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc < 1:6464487/93‑1 (MQ=38) tAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc < 1:6116415/93‑1 (MQ=38) tAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc > 2:2028966/1‑93 (MQ=39) tAAGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc > 1:3806579/1‑93 (MQ=39) aaGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa > 2:5712255/1‑93 (MQ=39) aaGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa < 2:1243892/93‑1 (MQ=39) aGGCGTTCACGC‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat > 2:1573508/1‑93 (MQ=255) || GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑C‑C‑GCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCAT > NC_000913/3537312‑3537486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |