BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2392482	241 (0.920)	18 (0.070) +TGGGCG	6/172	26.8	7.6%	coding (585/1842 nt)	nuoL	NADH dehydrogenase I chain L
*	?	NC_000913	= 2392486	225 (0.860)	18 (0.070) +TGGGCG	6/172	26.8	7.6%	coding (581/1842 nt)	nuoL	NADH dehydrogenase I chain L
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 260 total aligned reads displayed.

GCACCGCCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGC  >  NC_000913/2392390‑2392574

 caccgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCa                                                                                             <  1:3524424/93‑1 (MQ=255)

  cccgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAg                                                                                            <  1:1930790/92‑1 (MQ=255)

  accgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAg                                                                                            <  1:3908061/93‑1 (MQ=255)

  accgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAg                                                                                            <  1:4833930/93‑1 (MQ=255)

   ccgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAgg                                                                                           >  1:5496986/1‑93 (MQ=255)

   ccgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAgg                                                                                           <  2:3236197/93‑1 (MQ=255)

    cgcCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAggg                                                                                          >  1:3674997/1‑93 (MQ=255)

         agcagcATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                     <  1:1255952/93‑1 (MQ=255)

         agcagcATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGccc                                                                                     >  2:529963/1‑93 (MQ=255)

             gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTTAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                 >  1:400953/1‑93 (MQ=255)

             gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                 >  2:5253013/1‑93 (MQ=255)

             gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                 <  1:312650/93‑1 (MQ=255)

             gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGtt                                                                                 >  1:5148787/1‑93 (MQ=255)

             gcaTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGATCAGGGCGCCCCGtt                                                                                 >  1:4108079/1‑93 (MQ=255)

               aTCAGCGTCGCCCACATCAGCATGTTATTGCTGTCAGCAAAGTGCGCTGGTGCCGGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCg                                                                               <  1:3351114/93‑1 (MQ=255)

               aTCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCg                                                                               <  1:4305776/93‑1 (MQ=255)

                tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                              <  1:6418979/93‑1 (MQ=255)

                tCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGt                                                                              <  1:3189112/93‑1 (MQ=255)

                 cAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGtt                                                                             <  2:574047/93‑1 (MQ=255)

                   gCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGt                                                                           <  1:6251928/93‑1 (MQ=255)

                     gTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaa                                                                         <  1:3617338/93‑1 (MQ=255)

                     gTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCAAGTTCGTTGTaa                                                                         >  2:4627619/1‑93 (MQ=255)

                      tCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTaaa                                                                        >  1:960798/1‑93 (MQ=255)

                       cGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAg                                                                       >  1:2314857/1‑93 (MQ=255)

                       cGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAg                                                                       >  2:4319070/1‑93 (MQ=255)

                        gCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGa                                                                      >  2:5824248/1‑93 (MQ=255)

                        gCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGa                                                                      <  1:3492751/93‑1 (MQ=255)

                         cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                     >  1:5669469/1‑93 (MQ=255)

                         cccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGaa                                                                     <  1:2810348/93‑1 (MQ=255)

                          ccACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAAt                                                                    <  2:4220002/93‑1 (MQ=255)

                           cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                   <  1:385067/93‑1 (MQ=255)

                           cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                   <  2:4068468/93‑1 (MQ=255)

                           cacaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATg                                                                   >  2:1522407/1‑93 (MQ=255)

                            acaTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGa                                                                  <  2:1112313/93‑1 (MQ=255)

                              aTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAAc                                                                <  2:2037486/93‑1 (MQ=255)

                              aTCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTGCAGGGCGCCCAGTTCGTTGTAAAGAATGAAc                                                                <  1:454754/93‑1 (MQ=255)

                               tCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACa                                                               >  2:4752105/1‑93 (MQ=255)

                                cAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAg                                                              <  2:2308679/93‑1 (MQ=255)

                                 aGCATGTTATTGCCGTCAGCAAAGTGCGCTGTTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                             <  2:6239408/93‑1 (MQ=255)

                                 aGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGt                                                             <  2:1814266/93‑1 (MQ=255)

                                   cATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGc                                                           <  2:197171/93‑1 (MQ=255)

                                      gTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaa                                                        >  1:1759332/1‑93 (MQ=255)

                                       ttATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAATTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                       <  2:3563986/93‑1 (MQ=255)

                                       ttATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                       <  1:5617263/93‑1 (MQ=255)

                                       ttATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                       <  1:6390739/93‑1 (MQ=255)

                                       ttATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                       <  2:2275326/93‑1 (MQ=255)

                                       ttATTGCCGTCAGCAAAGTGCGCTCGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGaaa                                                       >  2:4660698/1‑93 (MQ=255)

                                         aTTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                     >  1:6002460/1‑93 (MQ=255)

                                         aTTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                     <  2:2087121/93‑1 (MQ=255)

                                         aTTGCAGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGc                                                     <  1:4154889/93‑1 (MQ=255)

                                          ttGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGAGAAAGca                                                    >  2:602151/1‑92 (MQ=255)

                                           tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGACAGCGa                                                   >  1:6651561/1‑93 (MQ=255)

                                           tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGa                                                   >  2:2942000/1‑93 (MQ=255)

                                           tGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGa                                                   <  2:2431528/93‑1 (MQ=255)

                                            gCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAg                                                  >  2:380879/1‑93 (MQ=255)

                                            gCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAg                                                  <  1:1117669/93‑1 (MQ=255)

                                            gCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAg                                                  >  2:5383525/1‑93 (MQ=255)

                                             ccGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAgg                                                 <  2:6496788/93‑1 (MQ=255)

                                             ccGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAgg                                                 <  2:3436890/93‑1 (MQ=255)

                                               gTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGaa                                               >  2:6372045/1‑93 (MQ=255)

                                                tCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAac                                              <  2:811385/93‑1 (MQ=255)

                                                  aGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAacac                                            <  1:1396100/93‑1 (MQ=255)

                                                  aGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAacac                                            >  2:2586319/1‑93 (MQ=255)

                                                     aaaGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTc                                         >  2:1150143/1‑93 (MQ=255)

                                                     aaaGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTc                                         <  1:42554/93‑1 (MQ=255)

                                                       aGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAc                                       >  1:1511962/1‑93 (MQ=255)

                                                       aGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAc                                       >  2:2790040/1‑93 (MQ=255)

                                                       aGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAc                                       <  2:2633322/93‑1 (MQ=255)

                                                        gTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAcc                                      >  1:1671185/1‑93 (MQ=255)

                                                        gTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCAcc                                      >  1:5848747/1‑93 (MQ=255)

                                                          gcggTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCca                                    <  2:435877/93‑1 (MQ=255)

                                                            gcTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCcaca                                  >  2:6350585/1‑93 (MQ=255)

                                                             cTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGCTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCacac                                 >  1:633672/1‑93 (MQ=255)

                                                               ggTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGCGGAACACGTCACCCACACgg                               >  2:1495274/1‑93 (MQ=255)

                                                                      gTTCCACCATTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacgc                        >  2:6678196/1‑92 (MQ=255)

                                                                       ttCCACCATTTCGCAGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCacgac                       <  1:6588771/93‑1 (MQ=255)

                                                                         ccaccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCAcgacga                     >  1:5406903/1‑93 (MQ=255)

                                                                          caccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGaa                    >  2:2167184/1‑93 (MQ=255)

                                                                           accaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAAc                   >  2:2870269/1‑93 (MQ=255)

                                                                            ccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACg                  >  2:458129/1‑93 (MQ=255)

                                                                            ccaTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACg                  >  2:5026923/1‑93 (MQ=255)

                                                                             caTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGacgcacgc                 >  1:270943/1‑93 (MQ=255)

                                                                             caTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGc                 <  1:6154811/93‑1 (MQ=255)

                                                                              aTTTCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCt                <  1:4480903/93‑1 (MQ=255)

                                                                               tttCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCTAGTAACACGTCACCCACACGGGTCACGACGAACGCtt               <  1:6466906/93‑1 (MQ=255)

                                                                               tttCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCtt               >  1:629430/1‑93 (MQ=255)

                                                                                ttCGCGGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCttt              <  1:5283523/93‑1 (MQ=255)

                                                                                   gcgGAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCAt           <  2:1691524/93‑1 (MQ=255)

                                                                                     ggAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCTTTg         >  2:5624077/1‑93 (MQ=255)

                                                                                      gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc        <  1:5235919/93‑1 (MQ=255)

                                                                                      gAAGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGc        >  1:1838793/1‑93 (MQ=255)

                                                                                       aaGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGcc       >  1:303672/1‑93 (MQ=255)

                                                                                       aaGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGcc       >  1:838676/1‑93 (MQ=255)

                                                                                       aaGTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGcc       >  1:898853/1‑93 (MQ=255)

                                                                                         gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc     <  1:3227799/93‑1 (MQ=255)

                                                                                         gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc     <  1:4932918/93‑1 (MQ=255)

                                                                                         gTTCAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGc     >  1:5046652/1‑93 (MQ=255)

                                                                                            cAGGGCGCCGAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc  <  1:100989/93‑1 (MQ=255)

                                                                                            cAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc  <  1:2446095/93‑1 (MQ=255)

                                                                                            cAGGGCGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTgc  <  2:3270777/93‑1 (MQ=255)

GCACCGCCCAGCAGCATCAGCGTCGCCCACATCAGCATGTTATTGCCGTCAGCAAAGTGCGCTGGTGCCAGTTCCACCATTTCGCGGAAGTTCAGGGTGCCCAGTTCGTTGTAAAGAATGAACAGTGCGAAAGCGAGGAACACGTCACCCACACGGGTCACGACGAACGCTTTCATTGCCGCTGC  >  NC_000913/2392390‑2392574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.