BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3796153	295 (1.120)	3 (0.010)	3/182	30.3	1.0%	coding (787/1074 nt)	rfaK	putative hexose transferase
*	?	NC_000913	= 3796172	285 (1.100)	3 (0.010)	3/182	30.3	1.0%	coding (768/1074 nt)	rfaK	putative hexose transferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 299 total aligned reads displayed.

GATATGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGATATA  >  NC_000913/3796061‑3796245

gATATGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTc                                                                                              <  2:4503301/93‑1 (MQ=255)

gATATGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTc                                                                                              <  1:6491307/93‑1 (MQ=255)

 atatGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCg                                                                                             >  2:1026746/1‑93 (MQ=255)

 atatGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCg                                                                                             >  2:3221834/1‑93 (MQ=255)

  tatGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGa                                                                                            <  1:2188239/93‑1 (MQ=255)

   aagAACAAGAGCTGTATCAACAAAAATGACAAAATCACTATCCTTGGTCAACGCAACGATATAAATAAACTCATCAAATGGTAGTGTTTCGAt                                                                                           <  1:4058212/91‑1 (MQ=255)

       aCAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCa                                                                                       <  2:1443498/93‑1 (MQ=255)

       aCAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCa                                                                                       >  1:3463627/1‑93 (MQ=255)

          agagCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgt                                                                                    >  1:3694744/1‑93 (MQ=255)

          agagCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgt                                                                                    >  1:6319011/1‑93 (MQ=255)

           gagCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgta                                                                                   <  1:4030615/93‑1 (MQ=255)

            agCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtat                                                                                  >  1:5451486/1‑93 (MQ=255)

             gCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCACATGGTAGTGTTTCGATTTCAAgtatt                                                                                 >  2:5455827/1‑93 (MQ=255)

               tGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtattgg                                                                               <  1:1501683/93‑1 (MQ=255)

                gTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtattggt                                                                              <  1:4719143/93‑1 (MQ=255)

                  aTCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtattggtat                                                                            >  2:1427600/1‑93 (MQ=255)

                   tCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtattggtatt                                                                           <  1:6587497/93‑1 (MQ=255)

                   tCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAgtattggtatt                                                                           <  1:1556773/93‑1 (MQ=255)

                      aCAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTc                                                                        >  2:3100871/1‑93 (MQ=255)

                      aCAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTc                                                                        >  2:1908739/1‑93 (MQ=255)

                       cAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCa                                                                       <  2:4465835/93‑1 (MQ=255)

                        aGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCaa                                                                      <  1:1047593/93‑1 (MQ=255)

                         gAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAAt                                                                     <  2:2356963/93‑1 (MQ=255)

                         gAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAAt                                                                     >  1:2838314/1‑93 (MQ=255)

                         gAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAAt                                                                     >  2:6387586/1‑93 (MQ=255)

                          aaaTGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATa                                                                    <  1:332286/93‑1 (MQ=255)

                            aTGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATaaa                                                                  >  1:1412038/1‑93 (MQ=255)

                             tGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAAt                                                                 >  2:5183444/1‑93 (MQ=255)

                              gACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATc                                                                >  1:2274278/1‑93 (MQ=255)

                              gACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATc                                                                <  1:799440/93‑1 (MQ=255)

                              gACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATc                                                                <  2:3787459/93‑1 (MQ=255)

                               aCAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCt                                                               <  2:4813014/93‑1 (MQ=255)

                               aCAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCt                                                               <  2:2831605/93‑1 (MQ=255)

                               aCAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCt                                                               <  2:3911398/93‑1 (MQ=255)

                               aCAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCt                                                               <  2:6491459/93‑1 (MQ=255)

                                cAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCtt                                                              <  2:528228/93‑1 (MQ=255)

                                      cACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTa                                                        <  2:4881704/93‑1 (MQ=255)

                                       aCTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTaa                                                       <  1:6199624/93‑1 (MQ=255)

                                       aCTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTACGGTaa                                                       >  1:4107596/1‑93 (MQ=255)

                                        cTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAAc                                                      >  1:5633262/1‑93 (MQ=255)

                                        cTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGGGTTTCGATTTCAAGAATTGGAATTGTCATTAAATCTTGCGGTAAc                                                      >  2:3337298/1‑93 (MQ=255)

                                          ataCTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAAccc                                                    <  1:4235197/93‑1 (MQ=255)

                                          ataCTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAAccc                                                    <  2:5250040/93‑1 (MQ=255)

                                           taCTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCg                                                   >  2:6340419/1‑93 (MQ=255)

                                            aCTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCgg                                                  >  1:1900192/1‑93 (MQ=255)

                                             cTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGt                                                 <  2:3037075/93‑1 (MQ=255)

                                             cTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGt                                                 >  1:5820049/1‑93 (MQ=255)

                                              ttGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTa                                                <  2:6691745/93‑1 (MQ=255)

                                                ggTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTaaa                                              <  2:4202722/93‑1 (MQ=255)

                                                 gTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAat                                             <  1:5543873/93‑1 (MQ=255)

                                                  tCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAata                                            >  2:1743522/1‑93 (MQ=255)

                                                   caacgcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAatat                                           <  1:2703412/93‑1 (MQ=255)

                                                     acgcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATaa                                         >  1:6425785/1‑93 (MQ=255)

                                                     acgcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATaa                                         >  1:5206992/1‑93 (MQ=255)

                                                      cgcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAAt                                        <  1:1184684/93‑1 (MQ=255)

                                                      cgcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAAt                                        <  1:2410215/93‑1 (MQ=255)

                                                       gcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATc                                       >  1:2100779/1‑93 (MQ=255)

                                                       gcaacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATc                                       <  1:253884/93‑1 (MQ=255)

                                                        caacgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATcc                                      >  2:1214321/1‑93 (MQ=255)

                                                          acgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTTGGATTGTCAATAAATCTTGCGGTAACCCCGTAAATATTATCCGa                                    >  1:3895378/1‑93 (MQ=255)

                                                          acgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTGTTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCAGa                                    >  2:4911182/1‑93 (MQ=255)

                                                          acgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGa                                    >  2:899097/1‑93 (MQ=255)

                                                          acgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGa                                    >  2:5718950/1‑93 (MQ=255)

                                                          acgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGa                                    <  1:514517/93‑1 (MQ=255)

                                                           cgGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGAt                                   <  2:4561956/93‑1 (MQ=255)

                                                            ggTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATa                                  >  2:5112779/1‑93 (MQ=255)

                                                             gTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATaa                                 <  2:1852930/93‑1 (MQ=255)

                                                             gTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATaa                                 <  2:4974115/93‑1 (MQ=255)

                                                              tataAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAt                                <  1:1995040/93‑1 (MQ=255)

                                                               ataaataaACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAtt                               <  2:6618645/93‑1 (MQ=255)

                                                                taaataaaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAttt                              <  1:5779073/93‑1 (MQ=255)

                                                                taaataaaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAttt                              >  2:2068848/1‑93 (MQ=255)

                                                                taaataaaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAttt                              >  1:3788682/1‑93 (MQ=255)

                                                                 aaataaaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAAtttt                             <  2:2949872/93‑1 (MQ=255)

                                                                  aataaaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTc                            >  1:732079/1‑93 (MQ=255)

                                                                      aaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAg                        >  2:1352881/1‑93 (MQ=255)

                                                                      aaCTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAg                        >  1:5971359/1‑93 (MQ=255)

                                                                         tcatcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgt                     <  1:4854039/93‑1 (MQ=255)

                                                                         tcatcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgt                     <  1:3588967/93‑1 (MQ=255)

                                                                         tcatcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgt                     <  1:2943752/93‑1 (MQ=255)

                                                                         tcatcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgt                     >  2:5826043/1‑93 (MQ=255)

                                                                          catcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAGAgtgtg                    >  1:4126002/1‑93 (MQ=255)

                                                                          catcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgtg                    <  1:4513177/93‑1 (MQ=255)

                                                                           atcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgtgt                   <  1:3673112/93‑1 (MQ=255)

                                                                           atcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgtgt                   <  2:2773178/93‑1 (MQ=255)

                                                                           atcaAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAgtgtgt                   >  1:6731706/1‑93 (MQ=255)

                                                                              aaaTGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGtttt                <  2:146958/93‑1 (MQ=255)

                                                                              aaaTGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGtttt                <  1:5088666/93‑1 (MQ=255)

                                                                                 tGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCAc             <  2:5163159/93‑1 (MQ=255)

                                                                                  ggTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCAct            >  2:268213/1‑93 (MQ=255)

                                                                                     aGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCActtct         >  2:5527230/1‑93 (MQ=255)

                                                                                      gtgtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCActtctt        <  2:4112865/93‑1 (MQ=255)

                                                                                      gtgtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCActtctt        <  1:1783844/93‑1 (MQ=255)

                                                                                        gtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCCCTTCTTGa      >  1:6103554/1‑93 (MQ=255)

                                                                                        gtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGa      >  1:4384550/1‑93 (MQ=255)

                                                                                        gtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGa      <  2:2268266/93‑1 (MQ=255)

                                                                                        gtTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAAACCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGa      <  2:6170891/93‑1 (MQ=255)

                                                                                         tttCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGat     <  2:1604160/93‑1 (MQ=255)

                                                                                          ttCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGata    <  2:3458191/93‑1 (MQ=255)

                                                                                           tCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGatat   >  2:1662017/1‑93 (MQ=255)

GATATGAACAAGAGCTGTATCAACAGAAATGACAAAATCACTATACTTGGTCAACGCAACGGTATAAATAAACTCATCAAATGGTAGTGTTTCGATTTCAAGTATTGGTATTGTCAATAAATCTTGCGGTAACCCGGTAAATATAATCCGATAATTTTCAAAGTGTGTTTTCACTTCTTGATATA  >  NC_000913/3796061‑3796245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.