| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 269765 = | NA (NA) | 242 (0.920) | 126/184 | 0.3 | 99.6% | coding (300/405 nt) | yi91a | hypothetical protein |
| ? | NC_000913 | = 370983 | 1 (0.000) | coding (536/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 530 total aligned reads displayed.
CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA > NC_000913/370891‑371075 | cagctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaAt > 1:5953207‑M2/92‑93 (MQ=255)cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat > 1:5412100/1‑93 (MQ=255)cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat > 2:2491839/1‑93 (MQ=255) aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt < 2:688415‑M2/93‑2 (MQ=255) aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt > 2:1776044‑M2/1‑92 (MQ=255) gctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATgg > 1:3229796‑M2/90‑93 (MQ=255) gctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATgg > 2:1305520‑M2/90‑93 (MQ=255) gAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGACGACTATCGAAAACCTGAAGCTGATGATtgt < 2:1471962‑M2/93‑4 (MQ=255) aacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGatat > 2:2614687‑M2/86‑93 (MQ=255) acaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATc < 2:5296552‑M2/9‑1 (MQ=255) acaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATc < 2:49179‑M2/9‑1 (MQ=255) acaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATc < 1:3675647‑M2/9‑1 (MQ=255) tgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagatt < 2:6208029‑M2/93‑9 (MQ=255) gtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattc > 2:2104619‑M2/1‑84 (MQ=255) aacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCtt > 1:3359850‑M2/83‑93 (MQ=255) acagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTc < 1:1803602‑M2/12‑1 (MQ=255) acagaccgagaaagacactgaagttcaaaacaacgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTc > 1:4784602‑M2/82‑93 (MQ=255) gaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGtt > 2:2962862‑M2/79‑93 (MQ=255) gaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGtt > 2:3225005‑M2/79‑93 (MQ=255) accgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttt < 1:3524692‑M2/16‑1 (MQ=255) accgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttt > 1:1590436‑M2/78‑93 (MQ=255) gCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattgg > 2:1664369‑M2/1‑78 (MQ=255) cgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttttt < 1:4688048‑M2/18‑1 (MQ=255) agaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGa > 2:4352422‑M2/74‑93 (MQ=255) gaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGAt > 2:6401103‑M2/73‑93 (MQ=255) aTGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaa < 2:5015009‑M2/93‑20 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaac < 2:1139079‑M2/93‑21 (MQ=255) gCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacg < 2:3484646‑M2/93‑22 (MQ=255) agacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc > 2:904122‑M2/70‑93 (MQ=255) gacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCa < 1:2750134‑M2/25‑1 (MQ=255) aaCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaa < 1:2154866‑M2/93‑25 (MQ=255) ccGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaaca > 1:3793484‑M2/1‑67 (MQ=255) ctgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGa < 2:3642415‑M2/29‑1 (MQ=255) gAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagt < 1:2325888‑M2/93‑29 (MQ=255) gAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagt < 2:5394396‑M2/93‑29 (MQ=255) aGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagtta > 1:1681596‑M2/1‑63 (MQ=255) aGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagtta < 2:2765968‑M2/93‑31 (MQ=255) aGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagtta > 1:2974187‑M2/1‑63 (MQ=255) ggTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttat < 1:4248924‑M2/93‑32 (MQ=255) ggattAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggttaacgcaacagttatg < 1:3906027‑M2/91‑33 (MQ=255) ttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGAc < 1:800284‑M2/35‑1 (MQ=255) tATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgt < 1:1095507‑M2/93‑34 (MQ=255) tcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGAcc > 2:10899‑M2/58‑93 (MQ=255) ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtga > 1:4391736‑M2/1‑58 (MQ=255) aaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGAc > 2:5169958‑M2/55‑93 (MQ=255) aaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGAc > 2:816787‑M2/55‑93 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAATCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggg > 1:6202687‑M2/1‑49 (MQ=255) gaaagagataattgaaaggggtgttgccttgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGt > 1:1219646‑M2/48‑93 (MQ=255) gaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCGGCGATTTGACCGACGCCCTGt < 1:4950666‑M2/46‑1 (MQ=255) gaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGt < 2:5625525‑M2/46‑1 (MQ=255) gaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGt < 2:4203323‑M2/46‑1 (MQ=255) aaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGtt > 2:6125943‑M2/47‑93 (MQ=255) gagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa < 1:3136083‑M2/50‑1 (MQ=255) agataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGaa < 2:4698250‑M2/51‑1 (MQ=255) agataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGaa < 2:1574781‑M2/51‑1 (MQ=255) aGCTTTATCGTCAGCCGACTATCGAAAACCTGAGGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcg < 1:6548303‑M2/93‑51 (MQ=255) gCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcgg < 2:3293064‑M2/93‑52 (MQ=255) ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggagg < 2:3055224‑M2/93‑55 (MQ=255) attgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcg < 2:3395063‑M2/56‑1 (MQ=255) tgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGcc < 2:3798148‑M2/58‑1 (MQ=255) tgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGcc < 1:2495379‑M2/58‑1 (MQ=255) aTCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtt > 2:4129443‑M2/1‑37 (MQ=255) cGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttt > 2:4842745‑M2/1‑35 (MQ=255) aaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGa > 2:4293208‑M2/33‑93 (MQ=255) aaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGa > 1:6358186‑M2/33‑93 (MQ=255) aggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa > 2:6002430‑M2/32‑93 (MQ=255) aggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa > 1:463083‑M2/32‑93 (MQ=255) gggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaata > 1:3742531‑M2/30‑93 (MQ=255) gggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaata > 1:2698685‑M2/30‑93 (MQ=255) gttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat < 1:5235518‑M2/68‑1 (MQ=255) tgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGc < 1:5269895‑M2/70‑1 (MQ=255) gcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCt < 2:6660589‑M2/71‑1 (MQ=255) cattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTg < 1:630255‑M2/72‑1 (MQ=255) attgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGt > 1:5704656‑M2/21‑93 (MQ=255) ttgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTc > 2:3870030‑M2/20‑93 (MQ=255) gAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaac < 1:5794224‑M2/93‑74 (MQ=255) gacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgc > 1:4153736‑M2/18‑93 (MQ=255) aaaaCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaaca > 1:921258‑M2/1‑19 (MQ=255) acagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACAGACGCCCTGTTTGAAGCGCGCCTGAATCATATGCTGTcgcg > 2:1535826‑M2/17‑93 (MQ=255) aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattt < 2:3985336‑M2/93‑78 (MQ=255) aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattt < 2:6544443‑M2/93‑78 (MQ=255) aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattt < 1:1946126‑M2/93‑78 (MQ=255) gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGCAGCGCGCCTGAATAATATGCTGTCGcgccg > 2:5517168‑M2/14‑93 (MQ=255) gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccg > 1:2847588‑M2/14‑93 (MQ=255) cTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttac > 1:4339278‑M2/1‑14 (MQ=255) cTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttac < 1:505348‑M2/93‑80 (MQ=255) attgaatctacaATGGATATCTTCGTTTTTGATCCCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccgc < 1:104736‑M2/81‑1 (MQ=255) attgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccgc < 1:1384560‑M2/81‑1 (MQ=255) tGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttaca > 1:2562168‑M2/1‑13 (MQ=255) tGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttaca < 2:6295596‑M2/93‑81 (MQ=255) gaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGAt < 2:2390934‑M2/84‑1 (MQ=255) aaGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc > 1:383534‑M2/1‑11 (MQ=255) aatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATc > 2:2213919‑M2/9‑93 (MQ=255) aGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagca < 2:5755881‑M2/93‑84 (MQ=255) aGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagca > 1:5163641‑M2/1‑10 (MQ=255) aGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagca > 1:6123557‑M2/1‑10 (MQ=255) atctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCa < 1:4486070‑M2/86‑1 (MQ=255) ctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAcc < 1:2591088‑M2/88‑1 (MQ=255) gattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaa < 2:4458621‑M2/93‑91 (MQ=255) ttgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaaaa > 1:2069730‑M2/1‑1 (MQ=255) | CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA > NC_000913/370891‑371075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |