| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3958258 | 10 (0.040) | 101 (0.400) +CCC |
55/174 | 7.8 | 90.8% | intergenic (‑827/‑34) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| ? | NC_000913 | 3958259 = | 11 (0.040) | intergenic (‑828/‑33) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑CCT‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGG > NC_000913/3958168‑3958349 | gATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cc < 1:1180370/93‑1 (MQ=255)gATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cc > 2:3366383/1‑93 (MQ=255)gATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cc < 1:5461934/93‑1 (MQ=255)gATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cc < 1:5048751/93‑1 (MQ=255) aTTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑ccc > 1:5123472/1‑92 (MQ=255) aTTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑ccc < 1:3960214/93‑2 (MQ=255) aTTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cac > 2:2720829/1‑91 (MQ=255) tttCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cccc > 2:4739269/1‑91 (MQ=255) tttCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cccc < 2:1473852/93‑3 (MQ=255) tttCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑cccc > 1:6298924/1‑91 (MQ=255) ttCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑t‑‑‑ccc‑‑‑cc < 2:1982896/93‑1 (MQ=255) tCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑ccc‑‑‑ccc > 2:6583680/1‑93 (MQ=255) tCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑ccc‑‑‑ccc < 2:4844878/93‑1 (MQ=255) cGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑cccc < 1:6140179/93‑1 (MQ=255) cGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑cccc < 1:1994115/93‑1 (MQ=255) gTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACCA‑‑‑T‑‑‑Ccc‑‑‑cccccc > 1:3809181/1‑93 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc > 1:5808894/1‑92 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc > 1:1444669/1‑92 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc > 2:2762691/1‑92 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc > 1:4164353/1‑92 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc > 2:3261684/1‑92 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc < 1:136865/93‑2 (MQ=255) tcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑CTC‑‑‑ccccccc > 2:2727152/1‑92 (MQ=255) gcttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccc < 2:5250140/92‑2 (MQ=255) cttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑cccccccc > 1:5627417/1‑91 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTCCCCCCGGTAACATTCAAATGCGATTCTCCTCCAT‑‑‑T‑‑‑Ccc‑‑‑cccccccct > 2:422596/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 2:3037700/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 2:4208888/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 2:2329218/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 2:2092045/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 1:1111818/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 2:5511329/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 1:2737248/1‑90 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccc > 1:3209839/1‑90 (MQ=255) tctctctcTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccgt > 1:431849/1‑89 (MQ=255) tctctctcTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑Ccc‑‑‑ccccccccct > 2:553426/1‑89 (MQ=255) tGATTTAAACATCCGCAGCCAACGGTTTAGCGGCTTACACGCGGTCCCATTAAAATGCGATTCTGCTCCAA‑‑‑TC‑‑CCC‑‑‑CCCCCCGTTCGAAGAtt < 2:3336110/93‑1 (MQ=255) tGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGAt > 2:992841/1‑93 (MQ=255) gATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TTC‑CCC‑‑‑CCCCCCCTTCGAGGAtt > 2:4490928/1‑93 (MQ=255) aTTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACCCGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTg < 1:1882940/93‑1 (MQ=255) tttAAACATCCGCCGCCAACCGGTTAGCGGGTTTCCCGCGGTCACATTCAAATGCGATTCTGCTACAAAC‑C‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGa < 2:5681889/93‑1 (MQ=255) tttAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGa < 1:2077512/93‑1 (MQ=255) tttAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGGCACATTCAAATGCGATTTTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTg < 1:3325343/93‑1 (MQ=255) ttAAACATCCCCAGCCAACCGGTTAGCGCCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGa < 2:154431/93‑1 (MQ=255) ttAAACACCCCCAGCCAACCGGGTAAGGGGTTACCCGGGGTCACATTCAAATGCGATTCTGCTACAAACCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGa < 2:4352522/93‑1 (MQ=255) ttAAAAATCCCCCGCCAACCGGGTAGCGGCTTTCCCGCGGGCCCATTCAAAAGCGATTCTTCTTCAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGa < 2:1054358/93‑1 (MQ=255) taaCATCCGCCGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAAAGCGATTCTTCTACAAACCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGc < 2:6550670/92‑1 (MQ=255) taaCATCCGCCGCCAACCCGTTAGCGGCTTACCCGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCa < 2:496389/92‑1 (MQ=255) aaCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCaa < 1:2570396/93‑1 (MQ=255) aCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TC‑‑CCC‑‑‑CCCCCCGTTCGAAGATTTAGCAATa > 2:5964186/1‑93 (MQ=255) cGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAAAATG‑GCAATa‑ccacc > 1:4200921/1‑89 (MQ=255) cAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTa < 2:2153045/93‑1 (MQ=255) cgCCAACCGGTTAGCGGCTTTCACGCGGGTCCATTCAAATGCGATTCTTCCACAAACCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTa < 2:1023570/92‑1 (MQ=255) gCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAAGTTGACCAATA‑CACCTag > 2:3296991/1‑92 (MQ=255) gCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCCTTCGAAGATTAGGCAATA‑CACCTATg > 2:704801/1‑93 (MQ=255) ccAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGc < 1:3837574/93‑1 (MQ=255) cAACCCGGTAGCGGCTTACACGCGGGCACATTCAAAAGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGc < 2:321940/93‑1 (MQ=255) aaCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TC‑‑CCC‑‑‑CCCCCCCTTTCAAGATTTAGTAAAA‑CACCTATGCgct > 1:1317933/1‑91 (MQ=255) aCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAAC‑‑C‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCt < 2:3841564/93‑1 (MQ=255) aCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTCCGAAATTTGGGAAATA‑CACCTACGCGt > 2:3302460/1‑93 (MQ=255) aCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCCTTCGAAGATTGAGCAATA‑CACCTATGCGTc > 1:3386066/1‑93 (MQ=255) cGGTTAGCGGCTTTCACGCGGTCACATTCAAATGCGGTTTTTCTTCAAACCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCt < 2:5768874/93‑1 (MQ=255) cGGGTAGCGGCTTACCCGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCt < 2:4039878/93‑1 (MQ=255) ggTTAGCGGCTTACACCCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTa < 2:1473519/93‑1 (MQ=255) ttAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCCTTCGAAGATTGAGCAAAC‑CACCTATGGGTCTaaa > 2:4494312/1‑93 (MQ=255) aGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TC‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAAcccc < 1:331238/93‑1 (MQ=255) ggggCTTACCCCCGGGCACATTCAAATGCGATTCTGCTACAACCCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAAccc < 1:1939322/91‑1 (MQ=255) gCGGCTTACACGCGGTCACATTCAAATGCCATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAAcccc < 2:5858084/93‑1 (MQ=255) gCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGCGCAATA‑CACCTATACGTCTAAACCCCgc > 2:1081865/1‑92 (MQ=255) cTTACCCGCGGTTCCATTCAAAAGCGAATCTGCCACAAACCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGc < 2:624763/93‑1 (MQ=255) ttACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGcc < 2:397568/93‑1 (MQ=255) cccgcgGTCCCATTCAAATGCGATTCTGCCTCAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCcaac < 1:5915197/91‑1 (MQ=255) cggcgTCACATTCAAATGCGATTCTGCTGCAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCcaacaac < 1:1689377/89‑1 (MQ=255) ccgGTCACATTCAAACGCCATTCTGCTACAACC‑C‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCcaacaaca < 1:4217637/92‑1 (MQ=255) cgGTCACATTCAAATGCGATTCTGCTACAACC‑C‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCcaacaacaa < 1:424677/93‑1 (MQ=255) gTCAAATTCAAATGCGATTCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGc < 2:3740706/93‑1 (MQ=255) ccaTTCAAATGCGATTCTCCTCCAACC‑C‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGt < 2:5324375/92‑1 (MQ=255) caTTCAAATGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCCTTCAAAGACTG‑GCAACAGAACCTTAGCGTGAAAACCCCGGTCAACAACAAGCTgc > 1:4403166/1‑92 (MQ=255) aTTCAAATGCGA‑TCTGCCAACA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGa < 2:3431425/93‑1 (MQ=255) tCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑CCCCCCCCCCCCCTTCTAAGATTTAACAAAA‑CACCCATCCGGCAAAACCCCCGCCACAAACAAGACGTCGa > 1:3215905/1‑93 (MQ=255) tCAAATGCGATTCTGCTAAAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGa < 1:3182987/93‑1 (MQ=255) cAAATGCGATTCTGCTACAA‑‑‑TC‑‑CCC‑‑‑CCCCCCCGTCGAAGGTTTAGCAAAA‑AACCCATTCCGCTTAAACCCGGCCCACAACCAACTGCCCAAtt > 2:1833882/1‑93 (MQ=255) aaaTGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAAATTGAGCAATA‑CACCTATCCGTCTAAACCCCCGCCAACAACAAACTGTAGAAt > 2:2265810/1‑93 (MQ=255) aaTGCGATTCTGCTACAA‑‑‑TCCCCCC‑‑‑CCCCCCGTTCGAAAATTGAGCAAAA‑CACATTTCCGCCTAAACCCCGGCCAAAAAAAAGCTTTCAAAtt > 2:1088564/1‑93 (MQ=255) aTGCGATTCTGCTACAACCCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTc < 2:3882584/93‑1 (MQ=255) agCGATTCTGCTACAACCCC‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCg < 2:6015265/92‑1 (MQ=255) gATTCTGCCACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAGCCCCGGCCAACAACAAGCTGTCGAATTCGTTAc < 2:2294406/93‑1 (MQ=255) ttCTGCTACAA‑‑‑TCC‑CCC‑‑‑CCCCCCGTTCGAAAATTGGGCAATA‑ACCCTATGGGTTTAAACCCCGGCCAAAAAAAACCTGTCGAATTATTTACCg > 2:4387677/1‑93 (MQ=255) ttCTACTACAA‑‑‑T‑‑‑CCCCC‑CCCCCCGTTCGAAAATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAACCTGTCGAATTCGTTACCg > 1:784278/1‑93 (MQ=255) gCTACAA‑‑‑T‑‑‑CCCC‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCAAACAACAAGCTGTCGAATTCGTTCCCGGcccc > 2:2272228/1‑93 (MQ=255) a‑‑‑T‑‑‑CCC‑‑‑CCCCCCGTTCGAAGATTTAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAACTGTCGAATTCGTTACCGGCCCCTGCCTgg > 1:13974/1‑93 (MQ=255) | GATTTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑‑T‑‑‑CCT‑‑‑CCCCCCGTTCGAAGATTGAGCAATA‑CACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGG > NC_000913/3958168‑3958349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |