Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,192,6470GC51.2% 36.9 / inf 463intergenic (+106/+314)b3051/b3052putative membrane protein/putative kinase
Reads supporting (aligned to +/- strand):  ref base G (116/109);  new base C (142/94);  total (260/203)
Fisher's exact test for biased strand distribution p-value = 7.45e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.19e-04
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 477 total aligned reads displayed.

AATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACGG  >  NC_000913/3192555‑3192737
                                                                                            |                                                                                          
    atCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTc                                                                                        >  2:3749678/1‑93 (MQ=255)
    atCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTc                                                                                        <  1:3275708/93‑1 (MQ=255)
     tCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCg                                                                                       <  1:1404767/93‑1 (MQ=255)
     tCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCg                                                                                       >  1:5789158/1‑93 (MQ=255)
       ccTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCggg                                                                                     <  2:341400/93‑1 (MQ=255)
       ccTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCggg                                                                                     >  2:2058347/1‑93 (MQ=255)
       ccTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCggg                                                                                     <  1:3025522/93‑1 (MQ=255)
        cTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCgggg                                                                                    <  2:2589590/93‑1 (MQ=255)
        cTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCgggg                                                                                    >  2:4725276/1‑93 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGaa                                                                                  >  1:4886339/1‑93 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGaa                                                                                  >  2:5743744/1‑93 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGaa                                                                                  <  2:5310468/93‑1 (MQ=255)
           gCCCAAAAAGCGGGTGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAg                                                                                 <  1:1126662/93‑1 (MQ=255)
           gCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGATCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAg                                                                                 >  2:3995154/1‑93 (MQ=255)
            cccAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAgg                                                                                <  1:5989992/93‑1 (MQ=255)
               aaaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaa                                                                             <  2:1012394/93‑1 (MQ=255)
               aaaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCaa                                                                             >  2:6641738/1‑93 (MQ=255)
               aaaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCaa                                                                             <  2:1412014/93‑1 (MQ=255)
                 aaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaaaa                                                                           >  2:3148723/1‑93 (MQ=255)
                 aaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCaaaa                                                                           <  1:1671467/93‑1 (MQ=255)
                 aaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGATGTTGCAGCATTTTGCGTGACGGCTCGGGGCAGGCaaaa                                                                           >  2:5645668/1‑93 (MQ=255)
                  aaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGGAGGCaaaat                                                                          >  1:67626/1‑92 (MQ=255)
                  aaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAAc                                                                          <  2:150669/93‑1 (MQ=255)
                  aaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAAc                                                                          <  1:1779045/93‑1 (MQ=255)
                    gCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTg                                                                        >  1:6410006/1‑93 (MQ=255)
                    gCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTg                                                                        >  2:621832/1‑93 (MQ=255)
                      cGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGcc                                                                      <  2:4148723/93‑2 (MQ=255)
                      cGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGcc                                                                      >  2:589605/1‑92 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCAt                                                                     >  2:3901726/1‑93 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCAt                                                                     >  2:1151039/1‑93 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCAt                                                                     >  2:5214119/1‑93 (MQ=255)
                        gggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTc                                                                    >  1:5844687/1‑93 (MQ=255)
                         ggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTct                                                                   >  2:4554579/1‑92 (MQ=255)
                         ggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTct                                                                   <  1:5023633/93‑2 (MQ=255)
                         ggATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCa                                                                   <  2:6312391/93‑1 (MQ=255)
                           aTTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTctgg                                                                 <  2:6504721/93‑4 (MQ=255)
                            ttttttATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTctggg                                                                >  1:6534396/1‑89 (MQ=255)
                            ttttttATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCagag                                                                <  2:2389478/93‑1 (MQ=255)
                              ttttATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGaa                                                              <  1:5215950/93‑1 (MQ=255)
                                ttATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAg                                                            >  2:2245930/1‑93 (MQ=255)
                                   tatCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCAt                                                         >  1:864946/1‑93 (MQ=255)
                                   tatCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCAt                                                         >  2:4197088/1‑93 (MQ=255)
                                    atCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCAtt                                                        <  1:5551141/93‑1 (MQ=255)
                                    atCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCAtt                                                        <  2:4996344/93‑1 (MQ=255)
                                     tCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTg                                                       <  2:4231869/93‑1 (MQ=255)
                                      cTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGc                                                      <  2:4409623/93‑1 (MQ=255)
                                        gCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTTGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGt                                                    >  1:3414820/1‑93 (MQ=255)
                                         cGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTg                                                   <  2:2827990/93‑1 (MQ=255)
                                          gTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCgg                                                  >  1:5302021/1‑93 (MQ=255)
                                          gTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTgg                                                  >  1:4517267/1‑93 (MQ=255)
                                          gTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTgg                                                  <  2:1910808/93‑1 (MQ=255)
                                           ttCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCggg                                                 <  1:4421000/93‑1 (MQ=255)
                                           ttCCGCTAAAAAGGGCAAGTGATCAGGTTCTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTTCGTggg                                                 >  1:3976013/1‑93 (MQ=255)
                                            tCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCgggg                                                >  1:2644047/1‑93 (MQ=255)
                                             ccGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGt                                               <  2:3798928/93‑1 (MQ=255)
                                             ccGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGt                                               <  1:1829237/93‑1 (MQ=255)
                                             ccGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGt                                               >  2:396818/1‑93 (MQ=255)
                                              cGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTc                                              >  1:3608647/1‑93 (MQ=255)
                                              cGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTc                                              >  1:2492753/1‑93 (MQ=255)
                                               gCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTcc                                             <  2:4796875/93‑2 (MQ=255)
                                               gCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTcc                                             >  2:4847806/1‑92 (MQ=255)
                                               gCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTcc                                             >  1:2830501/1‑92 (MQ=255)
                                                cTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTccg                                            >  1:3735949/1‑91 (MQ=255)
                                                cTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTccg                                            >  1:5081671/1‑91 (MQ=255)
                                                 tAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCgg                                           >  1:77804/1‑93 (MQ=255)
                                                 tAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCgg                                           >  1:6214734/1‑93 (MQ=255)
                                                   aaaaGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGgcg                                         <  1:5727258/93‑1 (MQ=255)
                                                    aaggTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGgcgc                                        >  2:1072666/4‑93 (MQ=255)
                                                    aaggTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCAGgcgc                                        >  2:805256/4‑93 (MQ=255)
                                                       gTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCtca                                     >  1:5418878/1‑93 (MQ=255)
                                                        tGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCtcat                                    >  1:1482392/1‑93 (MQ=255)
                                                         gCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCtcatc                                   <  2:5520202/93‑1 (MQ=255)
                                                           aaaTGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaa                                 >  1:1996909/1‑93 (MQ=255)
                                                            aaTGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATcaac                                >  2:1838787/1‑93 (MQ=255)
                                                            aaTGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaac                                >  1:2179333/1‑93 (MQ=255)
                                                              tGATCAGGTTGTTGCAGCATTTTGCGTGACGTCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATCTCGTCGGGCCTGGCGCTCATcaacac                              <  1:1231391/93‑2 (MQ=255)
                                                               gATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAATGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAAt                             >  1:4061650/1‑93 (MQ=255)
                                                                     gttgttGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGa                       <  1:3096411/93‑1 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCggggg                       <  2:749221/90‑2 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCggggg                       >  1:2395370/4‑92 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCggggg                       <  1:3792155/90‑2 (MQ=255)
                                                                      acgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCgggggg                      >  2:8973/3‑91 (MQ=255)
                                                                        gttgCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTc                    <  1:4849676/93‑1 (MQ=255)
                                                                        gttgCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTc                    <  2:288818/93‑1 (MQ=255)
                                                                             agcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTcagccg               <  1:4202233/93‑3 (MQ=255)
                                                                             agcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTcagcag               <  2:3024403/93‑1 (MQ=255)
                                                                             agcaTTTGCCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGTGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTcagcag               <  2:2653066/93‑1 (MQ=255)
                                                                              gcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGGGAAAGCATTCCGTGGGGGCTGGCGCTCATCAACAATCGGGGAGGCAGCAgg              >  1:1557868/1‑93 (MQ=255)
                                                                              gcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAgg              >  1:2901383/1‑93 (MQ=255)
                                                                                aTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAgggg            <  1:4688575/93‑1 (MQ=255)
                                                                                 ttttGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAggggg           >  2:6056951/1‑93 (MQ=255)
                                                                                 ttttGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGCCTGGCGCTCATCAACAATCGGGGAGTCAGCAggggg           >  2:2168619/1‑93 (MQ=255)
                                                                                 ttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGc          <  2:4611422/93‑1 (MQ=255)
                                                                                 ttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGc          >  2:4326318/1‑93 (MQ=255)
                                                                                 ttttGCGTGACCGCTCGGGGAA‑GCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGGGGCAAGAAggggct          >  2:3507989/1‑91 (MQ=255)
                                                                                       gTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAAc    <  1:1039253/93‑1 (MQ=255)
                                                                                       gTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAAc    <  1:4771090/93‑1 (MQ=255)
                                                                                        tGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACg   <  1:2739059/93‑1 (MQ=255)
                                                                                         gACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACg   <  2:164596/93‑1 (MQ=255)
                                                                                          aCGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACgg  <  2:4426721/93‑1 (MQ=255)
                                                                                            |                                                                                          
AATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACGG  >  NC_000913/3192555‑3192737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑