BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	439,695	A→G	Y211H (TAT→CAT)	ispA ←	geranyltranstransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	439,695	0	A	G	99.7%	958.6 / NA	293	Y211H (TAT→CAT)	ispA	geranyltranstransferase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (171/121); total (172/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 295 total aligned reads displayed.

CACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTT  >  NC_000913/439605‑439783

cACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCt                                                                                        <  1:4585665/93‑1 (MQ=255)

cACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCt                                                                                        <  2:1802194/93‑1 (MQ=255)

 aCCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCtt                                                                                       <  1:5367863/93‑1 (MQ=255)

  cccTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTg                                                                                      >  1:5045953/1‑93 (MQ=255)

   ccTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGt                                                                                     <  2:3023113/93‑1 (MQ=255)

    cTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTc                                                                                    >  1:4307611/1‑93 (MQ=255)

    cTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTc                                                                                    <  2:5022286/93‑1 (MQ=255)

    cTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCAACCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTc                                                                                    >  2:90630/1‑93 (MQ=255)

      ggCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGa                                                                                  <  2:1988504/93‑1 (MQ=255)

        cGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGt                                                                                >  1:2951012/1‑93 (MQ=255)

         gTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTa                                                                               <  2:428280/93‑1 (MQ=255)

          ttttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTAc                                                                              >  2:563535/1‑93 (MQ=255)

          ttttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTAc                                                                              >  1:4948553/1‑93 (MQ=255)

          ttttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTAc                                                                              >  1:1756647/1‑93 (MQ=255)

          ttttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTAc                                                                              >  2:1891620/1‑93 (MQ=255)

            ttCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCg                                                                            <  1:5137783/93‑1 (MQ=255)

              cccAACGTTCCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACAGGc                                                                          <  1:4034473/93‑1 (MQ=255)

               ccAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCa                                                                         >  2:4667434/1‑93 (MQ=255)

                cAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCag                                                                        >  2:3912676/1‑93 (MQ=255)

                 aaCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCaga                                                                       <  2:1663182/93‑1 (MQ=255)

                 aaCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCaga                                                                       >  1:1713830/1‑93 (MQ=255)

                  aCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCagag                                                                      <  1:508772/93‑1 (MQ=255)

                  aCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCagag                                                                      <  2:6655111/93‑1 (MQ=255)

                  aCGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCagag                                                                      >  2:3335059/1‑93 (MQ=255)

                  aCGTTGCAGTATCTACCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTAGAGCACAGGCagag                                                                      >  1:2384310/1‑93 (MQ=255)

                    gTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCa                                                                    >  1:6717218/1‑93 (MQ=255)

                    gTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCa                                                                    >  1:2267781/1‑93 (MQ=255)

                       gCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCacga                                                                 <  1:547444/93‑1 (MQ=255)

                           tATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTc                                                             >  1:127922/1‑93 (MQ=255)

                             tctcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCt                                                           >  1:4471660/1‑93 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                         >  2:586978/1‑93 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                         >  1:2523447/1‑93 (MQ=255)

                               tcCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCttt                                                         <  2:631476/93‑1 (MQ=255)

                                cccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTa                                                        <  1:5301435/93‑1 (MQ=255)

                                cccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTa                                                        <  1:6109313/93‑1 (MQ=255)

                                cccACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTa                                                        >  1:1052160/1‑93 (MQ=255)

                                   accacATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTAtct                                                     >  2:253174/1‑93 (MQ=255)

                                    ccacATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTAtctc                                                    >  1:6190863/1‑93 (MQ=255)

                                     cacaTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTcc                                                   >  1:1944088/1‑93 (MQ=255)

                                     cacaTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTcc                                                   <  1:3487728/93‑1 (MQ=255)

                                      acaTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCg                                                  <  2:1161662/93‑1 (MQ=255)

                                       caTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCgg                                                 >  1:4076993/1‑93 (MQ=255)

                                        aTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgc                                                <  1:3789370/93‑1 (MQ=255)

                                        aTCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATATCCGgc                                                >  1:886480/1‑93 (MQ=255)

                                         tCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcg                                               >  2:2972934/1‑93 (MQ=255)

                                         tCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGgcg                                               >  1:262798/1‑93 (MQ=255)

                                             ggATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTa                                           >  1:2068790/1‑93 (MQ=255)

                                             ggATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTa                                           >  2:2425924/1‑93 (MQ=255)

                                              gATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTaa                                          <  1:3425231/93‑1 (MQ=255)

                                                tGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATg                                        >  1:5343863/1‑93 (MQ=255)

                                                tGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATg                                        >  1:1483283/1‑93 (MQ=255)

                                                 gTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGc                                       >  2:458681/1‑93 (MQ=255)

                                                 gTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGc                                       >  2:2863956/1‑93 (MQ=255)

                                                  tCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCa                                      >  2:4943167/1‑93 (MQ=255)

                                                  tCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCa                                      >  2:2246826/1‑93 (MQ=255)

                                                    aTCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCAcc                                    >  2:5781358/1‑93 (MQ=255)

                                                    aTCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCAcc                                    <  2:2456836/93‑1 (MQ=255)

                                                     tCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCa                                   >  2:5406772/1‑93 (MQ=255)

                                                     tCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCa                                   >  1:3322116/1‑93 (MQ=255)

                                                      ccTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCaa                                  <  2:452843/93‑1 (MQ=255)

                                                       cTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAGTGCACCAAg                                 >  2:2591972/1‑93 (MQ=255)

                                                       cTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAg                                 <  2:433100/93‑1 (MQ=255)

                                                       cTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCCTTATCTCCGGCGCTTAATGCACCAAg                                 >  2:3226443/1‑93 (MQ=255)

                                                         gAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGc                               <  1:323018/93‑1 (MQ=255)

                                                         gAACCTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGc                               >  1:3354775/1‑93 (MQ=255)

                                                            ccTGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGaa                            <  1:4629301/93‑1 (MQ=255)

                                                              tGGAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcg                          >  1:474957/1‑93 (MQ=255)

                                                               ggAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATGTCCGGCGCTTAATGCACCAAGGCGAAcgg                         >  1:6600940/1‑93 (MQ=255)

                                                               ggAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCGTAATGCACCAAGGCGCAcgg                         >  1:2827920/1‑93 (MQ=255)

                                                                gAAGGCAAGGCCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggc                        >  1:6285580/1‑93 (MQ=255)

                                                                 aaggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggcg                       <  1:1336865/93‑1 (MQ=255)

                                                                  aggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggcgg                      <  2:1402265/93‑1 (MQ=255)

                                                                  aggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAAcggcgg                      >  1:5848817/1‑93 (MQ=255)

                                                                   ggcaaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACggcggc                     >  2:2945266/1‑93 (MQ=255)

                                                                     caaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGgcgc                   <  2:3690585/93‑1 (MQ=255)

                                                                     caaggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGgcgc                   <  2:4114163/93‑1 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                 >  2:2744826/1‑93 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                 >  2:6176904/1‑93 (MQ=255)

                                                                       aggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGa                 >  2:4072318/1‑93 (MQ=255)

                                                                        ggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGaa                <  1:1143906/93‑1 (MQ=255)

                                                                        ggcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGaa                <  2:6453727/93‑1 (MQ=255)

                                                                         gcCGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAAt               <  2:3115198/93‑1 (MQ=255)

                                                                          ccGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATc              <  2:791531/93‑1 (MQ=255)

                                                                           cGATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCa             >  1:5638010/1‑93 (MQ=255)

                                                                            gATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCaa            <  1:2292110/93‑1 (MQ=255)

                                                                            gATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCaa            <  1:4116687/93‑1 (MQ=255)

                                                                            gATGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCaa            >  1:744780/1‑93 (MQ=255)

                                                                             aTGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAAt           <  2:2037531/93‑1 (MQ=255)

                                                                             aTGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAAt           >  2:1437130/1‑93 (MQ=255)

                                                                              tGCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATg          >  1:1525712/1‑93 (MQ=255)

                                                                               gCTCTCTGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATgc         <  1:2562811/93‑1 (MQ=255)

                                                                                ctctctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATgcg        >  2:353325/1‑93 (MQ=255)

                                                                                  ctctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGcc      <  2:2221792/93‑1 (MQ=255)

                                                                                    ctGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCgg    >  2:5242974/1‑93 (MQ=255)

                                                                                     tGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGt   >  2:6015262/1‑93 (MQ=255)

                                                                                     tGCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGt   <  2:3454736/93‑1 (MQ=255)

                                                                                      gCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCgggt  >  1:3586944/1‑91 (MQ=255)

                                                                                      gCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGtt  <  2:479862/93‑1 (MQ=255)

                                                                                      gCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGtt  <  1:3082307/93‑1 (MQ=255)

                                                                                      gCATGCTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGtt  >  1:270136/1‑93 (MQ=255)

CACCCTGGCGTTTTCCCAACGTTGCAGTATCTCCCACCACATCCAGGATGTCATCCTGAACCTGGAAGGCAAGGCCGATGCTCTCTGCATACTTGTCGAGTACCGGCAGAGCACGACGTCCTTTATCTCCGGCGCTTAATGCACCAAGGCGAACGGCGGCGCGAATCAATGCGCCGGTT  >  NC_000913/439605‑439783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`