Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,639,342 T→C L284P (CTC→CCC)  yhiP → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,639,3420TC99.7% 1130.8 / ‑5.0 345L284P (CTC→CCC) yhiPputative transport protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (179/165);  total (179/166)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 362 total aligned reads displayed.

TTCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCTCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGCT  >  NC_000913/3639252‑3639431
                                                                                          |                                                                                         
ttCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTccct                                                                                         >  2:708162/1‑93 (MQ=255)
ttCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTccct                                                                                         <  2:2925895/93‑1 (MQ=255)
 tCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTa                                                                                        >  2:1313160/1‑93 (MQ=255)
  cGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTAc                                                                                       <  1:1887480/93‑1 (MQ=255)
   gTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACg                                                                                      >  1:6659553/1‑93 (MQ=255)
    tCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGc                                                                                     >  1:5483341/1‑93 (MQ=255)
    tCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGc                                                                                     >  2:3545341/1‑93 (MQ=255)
    tCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGc                                                                                     >  1:2112571/1‑93 (MQ=255)
       ggCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCa                                                                                  >  1:3302118/1‑93 (MQ=255)
         cATTCAAGCTGGATAAAGCCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGa                                                                                <  2:5290485/93‑1 (MQ=255)
         cATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGa                                                                                <  1:3890379/93‑1 (MQ=255)
          aTTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGAt                                                                               <  2:6186274/93‑1 (MQ=255)
          aTTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGGGGTGTTTTACATTCCCTACGCCCAGAt                                                                               >  2:5220929/1‑93 (MQ=255)
              aaGCTGGATAAAACTGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCa                                                                           <  1:480838/93‑1 (MQ=255)
               aGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCaa                                                                          <  2:3284115/93‑1 (MQ=255)
               aGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCaa                                                                          >  1:5874761/1‑93 (MQ=255)
                gCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAAc                                                                         >  1:1676430/1‑93 (MQ=255)
                 cTGTATAAAACGGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCGCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACa                                                                        <  1:6188623/93‑1 (MQ=255)
                  tGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACAt                                                                       >  1:4731452/1‑93 (MQ=255)
                   ggATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATc                                                                      >  1:3740496/1‑93 (MQ=255)
                   ggATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATc                                                                      >  1:6707005/1‑93 (MQ=255)
                   ggATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATc                                                                      >  1:3686046/1‑93 (MQ=255)
                   ggATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATc                                                                      <  2:1369465/93‑1 (MQ=255)
                    gATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCg                                                                     >  1:875860/1‑93 (MQ=255)
                    gATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCg                                                                     >  2:4015913/1‑93 (MQ=255)
                    gATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCg                                                                     >  1:2635333/1‑93 (MQ=255)
                      tAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCt                                                                   <  1:4096699/93‑1 (MQ=255)
                      tAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCt                                                                   <  2:4457202/93‑1 (MQ=255)
                       aaaaCCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTg                                                                  <  2:1555730/93‑1 (MQ=255)
                         aaCCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGaa                                                                >  1:4930992/1‑93 (MQ=255)
                          aCCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGCAc                                                               >  2:1206030/1‑93 (MQ=255)
                          aCCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAAc                                                               <  2:3730637/93‑1 (MQ=255)
                           ccGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAAct                                                              <  2:3062162/93‑1 (MQ=255)
                           ccGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAAct                                                              <  2:5082040/93‑1 (MQ=255)
                             gggCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAActtc                                                            <  2:585911/93‑1 (MQ=255)
                             gggCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAActtc                                                            >  2:4622495/1‑93 (MQ=255)
                             gggCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAActtc                                                            <  2:5508170/93‑1 (MQ=255)
                              ggCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAActtct                                                           >  1:3247165/1‑93 (MQ=255)
                                cgcAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCttt                                                         >  2:6063063/1‑93 (MQ=255)
                                cgcAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCttt                                                         <  1:773696/93‑1 (MQ=255)
                                 gcAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTg                                                        >  1:1570117/1‑93 (MQ=255)
                                  cAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGc                                                       >  1:5911975/1‑93 (MQ=255)
                                   aaTAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGcc                                                      >  1:1991679/1‑93 (MQ=255)
                                   aaTAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGcc                                                      >  1:3469045/1‑93 (MQ=255)
                                    aTAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCa                                                     >  2:416335/1‑93 (MQ=255)
                                    aTAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCa                                                     >  2:3114370/1‑93 (MQ=255)
                                    aTAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGGGGTGTTTTACATTCCCTACGCCCAGATGCCAACATAGCTGAATTTTTTGccca                                                    >  2:2044847/1‑91 (MQ=255)
                                     tAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCAt                                                    >  1:1395428/1‑93 (MQ=255)
                                      aaaaTGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTCCGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATc                                                   <  2:1021991/93‑1 (MQ=255)
                                       aaaTGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATca                                                  >  1:6211667/1‑93 (MQ=255)
                                       aaaTGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATca                                                  >  2:6630522/1‑93 (MQ=255)
                                        aaTGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATcaa                                                 <  1:2974053/93‑1 (MQ=255)
                                         aTGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATcaac                                                <  1:4975391/93‑1 (MQ=255)
                                          tGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATcaaca                                               >  2:569190/1‑93 (MQ=255)
                                           gTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATcaacaa                                              <  2:217057/93‑1 (MQ=255)
                                             ttGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACg                                            <  1:4556537/93‑1 (MQ=255)
                                             ttGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACg                                            <  2:1642477/93‑1 (MQ=255)
                                              tGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGt                                           <  2:4310113/93‑1 (MQ=255)
                                               gTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTg                                          <  1:4166846/93‑1 (MQ=255)
                                                tCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGc                                         <  1:2847370/93‑1 (MQ=255)
                                                  gCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGcat                                       <  2:1122368/93‑1 (MQ=255)
                                                   ccTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGcatc                                      >  2:3793597/1‑93 (MQ=255)
                                                    cTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGcatca                                     >  1:2448591/1‑93 (MQ=255)
                                                     tttGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGcatcat                                    >  1:877331/1‑93 (MQ=255)
                                                     tttGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGcatcat                                    >  2:4912193/1‑93 (MQ=255)
                                                     tttGTCCTGAATCTCGGAGGCGTTGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTTGCATCAACAACGTGcatcat                                    <  2:833161/93‑1 (MQ=255)
                                                      ttGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATg                                   <  1:1008047/93‑1 (MQ=255)
                                                      ttGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATg                                   <  1:4290823/93‑1 (MQ=255)
                                                       tGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGa                                  <  1:3108723/93‑1 (MQ=255)
                                                         tCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGaaa                                >  1:1238679/1‑93 (MQ=255)
                                                         tCCTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGaaa                                <  2:6296116/93‑1 (MQ=255)
                                                           cTGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAAtt                              <  1:507636/93‑1 (MQ=255)
                                                            tGATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtc                             <  2:447851/93‑1 (MQ=255)
                                                             gATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtct                            >  2:4761819/1‑93 (MQ=255)
                                                             gATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtct                            >  1:1100822/1‑93 (MQ=255)
                                                             gATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtct                            >  1:5730320/1‑93 (MQ=255)
                                                             gATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtct                            >  1:724942/1‑93 (MQ=255)
                                                             gATGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtct                            <  2:1898974/93‑1 (MQ=255)
                                                              aTGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATtctc                           >  2:4967505/1‑93 (MQ=255)
                                                               tGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCg                          <  2:4113168/93‑1 (MQ=255)
                                                               tGCTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCg                          >  2:1711991/1‑93 (MQ=255)
                                                                 cTCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGt                        <  2:3962678/93‑1 (MQ=255)
                                                                  tCGAATCGGGGGTGTTTTACATTCCCTGCGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGtt                       <  2:3372910/93‑1 (MQ=255)
                                                                  tCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGtt                       >  2:2494533/1‑93 (MQ=255)
                                                                  tCGAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGtt                       >  2:1464580/1‑93 (MQ=255)
                                                                    gAAGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGtttt                     <  1:5566676/93‑1 (MQ=255)
                                                                      aGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTc                   >  1:333354/1‑93 (MQ=255)
                                                                      aGCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTc                   >  2:266845/1‑93 (MQ=255)
                                                                      aGCGGTGGAGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTc                   >  1:6526632/1‑93 (MQ=255)
                                                                       gCGGTGGTGTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTcc                  <  1:6344887/93‑1 (MQ=255)
                                                                          gtggttTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATc               <  1:4606653/93‑1 (MQ=255)
                                                                            ggtgTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCaa             >  2:1784718/1‑93 (MQ=255)
                                                                            ggtgTTTTACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCaa             <  2:4503579/93‑1 (MQ=255)
                                                                                   tACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTc      <  1:1428428/93‑1 (MQ=255)
                                                                                   tACATTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTc      >  2:3460462/1‑93 (MQ=255)
                                                                                      aTTCCCTACGCCCAGATGCCAACATCGCTGATCTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGc   <  1:2479123/93‑1 (MQ=255)
                                                                                      aTTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAATGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGc   <  2:4704402/93‑1 (MQ=255)
                                                                                      aTTCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGc   <  2:6378445/93‑1 (MQ=255)
                                                                                       ttCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGCt  <  2:6475158/93‑1 (MQ=255)
                                                                                       ttCCCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCCGTCAGCt  >  1:6033332/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCTCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGCT  >  NC_000913/3639252‑3639431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: