BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,661,127	A→G	E1028E (GAA→GAG)	yhiV →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,661,127	0	A	G	100.0%	1081.8 / NA	325	E1028E (GAA→GAG)	yhiV	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/178); total (147/178)

Only 100 of 331 total aligned reads displayed.

AAACGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAACATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCA  >  NC_000913/3661037‑3661216

aaaCGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCa                                                                                         <  2:2301786/93‑1 (MQ=255)

  aCGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCAtc                                                                                       <  1:2118670/93‑1 (MQ=255)

    gcgGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCAtctc                                                                                     <  1:6143790/93‑1 (MQ=255)

     cgGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATctct                                                                                    <  1:6630919/93‑1 (MQ=255)

     cgGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATctct                                                                                    <  1:2466554/93‑1 (MQ=255)

      ggtaggtaCCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCtt                                                                                   <  2:1075506/93‑1 (MQ=255)

       gtaggtaCCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCttt                                                                                  <  2:2889081/93‑1 (MQ=255)

        taggtaCCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTg                                                                                 >  1:4210872/1‑93 (MQ=255)

         aggtaCCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGc                                                                                >  2:4319935/1‑93 (MQ=255)

           gtaCCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGccc                                                                              >  2:1530920/1‑93 (MQ=255)

              ccGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCt                                                                           >  1:5994801/1‑93 (MQ=255)

               cGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCtt                                                                          <  2:6307629/93‑1 (MQ=255)

               cGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCtt                                                                          <  2:814424/93‑1 (MQ=255)

               cGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCtt                                                                          <  2:1355636/93‑1 (MQ=255)

                ggCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCttt                                                                         >  2:6430846/1‑93 (MQ=255)

                 gCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTa                                                                        >  2:4909314/1‑93 (MQ=255)

                  cGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCCGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaa                                                                       <  1:5101471/93‑1 (MQ=255)

                   gTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaa                                                                      >  2:4758472/1‑93 (MQ=255)

                    tGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaa                                                                     >  2:5672496/1‑93 (MQ=255)

                    tGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaa                                                                     <  2:6201233/93‑1 (MQ=255)

                    tGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaa                                                                     >  1:1923962/1‑93 (MQ=255)

                    tGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaa                                                                     <  1:3399798/93‑1 (MQ=255)

                    tGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaa                                                                     <  1:5396769/93‑1 (MQ=255)

                      aTGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaaaa                                                                   <  2:2700123/93‑1 (MQ=255)

                      aTGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaaaa                                                                   <  1:4839564/93‑1 (MQ=255)

                      aTGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaaaa                                                                   <  2:948715/93‑1 (MQ=255)

                      aTGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTaaaaaa                                                                   >  1:3181830/1‑93 (MQ=255)

                       tGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAg                                                                  <  2:5935664/93‑1 (MQ=255)

                       tGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAg                                                                  >  1:5219341/1‑93 (MQ=255)

                        ggtggggATGTTTGCCGCAACAGTGCTGACAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGc                                                                 <  1:905320/89‑1 (MQ=255)

                        gggCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGc                                                                 <  2:875805/93‑1 (MQ=255)

                        gggCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGc                                                                 >  1:5094129/1‑93 (MQ=255)

                        gggCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGc                                                                 <  2:2435692/93‑1 (MQ=255)

                          gCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGt                                                               <  1:5574221/93‑1 (MQ=255)

                          gCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGt                                                               <  2:4859423/93‑1 (MQ=255)

                            gggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTaa                                                             >  1:2755581/1‑93 (MQ=255)

                            gggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTaa                                                             >  2:4624454/1‑93 (MQ=255)

                             ggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAAc                                                            <  2:5338809/93‑1 (MQ=255)

                             ggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAAc                                                            <  1:1406898/93‑1 (MQ=255)

                             ggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAAc                                                            <  1:984230/93‑1 (MQ=255)

                             ggATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAAc                                                            >  2:3039367/1‑93 (MQ=255)

                                tGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACgtg                                                         >  1:2116157/1‑93 (MQ=255)

                                  tttGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTa                                                       >  1:5950093/1‑93 (MQ=255)

                                   ttGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTaa                                                      <  2:3363092/93‑1 (MQ=255)

                                    tGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTaaa                                                     <  1:1193315/93‑1 (MQ=255)

                                    tGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTaaa                                                     <  2:321153/93‑1 (MQ=255)

                                        gCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATgag                                                 <  2:2069194/93‑1 (MQ=255)

                                         cAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATgaga                                                >  2:545630/1‑93 (MQ=255)

                                         cAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATgaga                                                >  1:4033901/1‑93 (MQ=255)

                                          caCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGagag                                               <  1:4512472/92‑1 (MQ=255)

                                          aaCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGagag                                               <  1:1509526/93‑1 (MQ=255)

                                          aaCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGagag                                               >  2:2416725/1‑93 (MQ=255)

                                           aCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGt                                              >  1:1603862/1‑93 (MQ=255)

                                           aCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGt                                              >  1:4556889/1‑93 (MQ=255)

                                           aCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGt                                              >  2:369554/1‑93 (MQ=255)

                                           aCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGt                                              >  1:6328796/1‑93 (MQ=255)

                                           aCAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGt                                              >  1:704910/1‑93 (MQ=255)

                                            cAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTa                                             <  2:1272869/93‑1 (MQ=255)

                                              gTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAg                                           >  2:5029079/1‑93 (MQ=255)

                                              gTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAg                                           <  1:4317390/93‑1 (MQ=255)

                                              gTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAg                                           >  2:4129120/1‑93 (MQ=255)

                                               tGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAgg                                          >  2:1793770/1‑93 (MQ=255)

                                                gCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCGCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGt                                         >  2:3494406/1‑93 (MQ=255)

                                                 gtGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGtt                                        <  1:473544/92‑1 (MQ=255)

                                                 cTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGtt                                        <  2:362529/93‑1 (MQ=255)

                                                  tGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTg                                       >  1:2972489/1‑93 (MQ=255)

                                                   ggCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGa                                      <  1:1960887/93‑1 (MQ=255)

                                                      aaTTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACa                                   >  1:4148145/1‑93 (MQ=255)

                                                       aTTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACAt                                  >  1:3967002/1‑93 (MQ=255)

                                                        tttACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATg                                 >  2:5097366/1‑93 (MQ=255)

                                                         ttACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGa                                <  1:6473391/93‑1 (MQ=255)

                                                          tACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGaa                               >  1:3651743/1‑93 (MQ=255)

                                                            cTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAgg                             <  2:6491377/93‑1 (MQ=255)

                                                            cTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAgg                             >  2:6650572/1‑93 (MQ=255)

                                                            cTTCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAgg                             <  2:1701793/93‑1 (MQ=255)

                                                             ttCGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGt                            >  1:2293461/1‑93 (MQ=255)

                                                               cGTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTc                          <  1:5353254/93‑1 (MQ=255)

                                                                gTTCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCa                         <  1:1799488/93‑1 (MQ=255)

                                                                 ttCCGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAg                        >  2:3803501/1‑93 (MQ=255)

                                                                    cGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCt                     <  1:793106/93‑1 (MQ=255)

                                                                    cGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCt                     >  2:2944130/1‑93 (MQ=255)

                                                                    cGGTCTTTTTCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCt                     >  1:1672934/1‑93 (MQ=255)

                                                                         tttttCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTActc                <  1:442548/93‑1 (MQ=255)

                                                                         tttttCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTActc                <  2:3968086/93‑1 (MQ=255)

                                                                         tttttCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTActc                >  1:2033123/1‑93 (MQ=255)

                                                                         tttttCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTActc                >  1:128101/1‑93 (MQ=255)

                                                                           tttCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCtt              <  2:4518734/93‑1 (MQ=255)

                                                                             tCGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTc            <  2:6066302/93‑1 (MQ=255)

                                                                              cGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTcc           <  1:2421847/93‑1 (MQ=255)

                                                                              cGTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTcc           <  2:1393128/93‑1 (MQ=255)

                                                                               gTTGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCTTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCt          <  1:2895060/93‑1 (MQ=255)

                                                                                ttGTAGTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTg         >  2:5805283/1‑93 (MQ=255)

                                                                                     gTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAAc    <  1:2602879/93‑1 (MQ=255)

                                                                                     gTGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAAc    <  2:3225916/93‑1 (MQ=255)

                                                                                      tGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAAcc   >  1:3826415/1‑93 (MQ=255)

                                                                                      tGGAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAAcc   <  2:1146924/93‑1 (MQ=255)

                                                                                       ggAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCa  <  2:2221568/93‑1 (MQ=255)

                                                                                       ggAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCa  >  2:2179815/1‑93 (MQ=255)

                                                                                       ggAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCa  <  2:2020408/93‑1 (MQ=255)

                                                                                       ggAGCATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCa  <  1:1016585/93‑1 (MQ=255)

AAACGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAACATCTCTTTGCCCGCTTTAAAAAAGCGTAACGTGTAAATGAGAGTAAGGTTGAACATGAAGGTTCAGCCTTACTCTTTCCTGCTAACCA  >  NC_000913/3661037‑3661216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`