BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,679,306	T→C	S89G (AGC→GGC)	yhjJ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,679,306	0	T	C	100.0%	866.3 / NA	266	S89G (AGC→GGC)	yhjJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/137); total (129/137)

Only 100 of 273 total aligned reads displayed.

CATAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCTTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAGGCGAA  >  NC_000913/3679216‑3679395

 aTAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTg                                                                                        >  1:225612/1‑93 (MQ=255)

  tAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGc                                                                                       >  1:1211519/1‑93 (MQ=255)

   aaGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCTATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCg                                                                                      <  2:3764217/93‑1 (MQ=255)

   aaGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCg                                                                                      >  1:34485/1‑93 (MQ=255)

    agagACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGt                                                                                     <  2:4493541/93‑1 (MQ=255)

     gagaCAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGtt                                                                                    <  2:705058/93‑1 (MQ=255)

      agaCAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTa                                                                                   <  1:1619074/93‑1 (MQ=255)

      agaCAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTa                                                                                   <  2:4221154/93‑1 (MQ=255)

       gaCAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAg                                                                                  >  2:4051317/1‑93 (MQ=255)

       gaCAATTACCGGCGGCATCGGGCGTTTAGGGGCGATCCCCTGCTGCCACAATGAACGCGCCTGTGATGCGTCAAGGCCACCGCCTTGCGGTAg                                                                                  >  2:270094/1‑93 (MQ=255)

       gaCAATGACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAAGCCACCGCCTTGCGTTAg                                                                                  >  1:5555291/1‑93 (MQ=255)

        aCAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAgc                                                                                 <  2:3063616/93‑1 (MQ=255)

         cAATTCCCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAgcg                                                                                <  1:1379508/93‑1 (MQ=255)

          aaTTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAgcgc                                                                               <  2:281107/93‑1 (MQ=255)

           aTTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCa                                                                              >  2:2729641/1‑93 (MQ=255)

            ttACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCaa                                                                             <  1:1713427/93‑1 (MQ=255)

            ttACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCaa                                                                             <  1:6653772/93‑1 (MQ=255)

             tACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAAt                                                                            >  1:2150272/1‑93 (MQ=255)

              tccGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATa                                                                           <  1:4425558/92‑1 (MQ=255)

              aCCGGCGGCATCGGGCGTTTAGGGCCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAAtc                                                                           <  1:2091324/93‑2 (MQ=255)

               ccGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATAc                                                                          <  2:5397874/93‑1 (MQ=255)

               ccGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATAc                                                                          <  2:1849307/93‑1 (MQ=255)

               ccGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATAc                                                                          >  1:2609173/1‑93 (MQ=255)

               acggcggCATCGGGCGTTTAGGGTCGATCCCCTGCTGTCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATAc                                                                          >  1:4487235/2‑93 (MQ=255)

                cggcggCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACg                                                                         >  2:762599/1‑93 (MQ=255)

                  gcggcATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAg                                                                       <  1:4761319/93‑1 (MQ=255)

                     gcATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGa                                                                    <  2:6013252/93‑1 (MQ=255)

                     gcATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGa                                                                    >  1:4453510/1‑93 (MQ=255)

                     gcATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGa                                                                    >  1:1258601/1‑93 (MQ=255)

                      gaTCGGGGGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGAt                                                                   <  2:4713561/92‑1 (MQ=255)

                      cATCGGGCGTTTAGCGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGAt                                                                   <  1:3081175/93‑1 (MQ=255)

                       aTCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATg                                                                  >  1:5801495/1‑93 (MQ=255)

                       aTCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATg                                                                  <  1:5295786/93‑1 (MQ=255)

                       aTCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATg                                                                  >  2:2987004/1‑93 (MQ=255)

                       aTCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATg                                                                  >  1:1001741/1‑93 (MQ=255)

                        tCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATgg                                                                 >  2:4287605/1‑93 (MQ=255)

                        tCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATgg                                                                 >  1:2339236/1‑93 (MQ=255)

                        tCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATgg                                                                 >  2:1011591/1‑93 (MQ=255)

                         cGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGc                                                                >  2:650214/1‑93 (MQ=255)

                           ggCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGt                                                              >  2:5278375/1‑93 (MQ=255)

                            gCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTg                                                             >  1:1059174/1‑93 (MQ=255)

                              gTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGGTGGCGTGAc                                                           >  2:5895576/1‑93 (MQ=255)

                              gTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGAc                                                           <  1:1354818/93‑1 (MQ=255)

                              gTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGAc                                                           >  2:1385670/1‑93 (MQ=255)

                              gTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGAc                                                           <  1:3618456/93‑1 (MQ=255)

                                     gTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAAcc                                                    <  2:1791136/93‑1 (MQ=255)

                                       cGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGc                                                  >  2:2519304/1‑93 (MQ=255)

                                       cGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGc                                                  <  2:233276/93‑1 (MQ=255)

                                        gctCCCCTTCTGCCACAATGAAGGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGct                                                 <  2:1116724/91‑1 (MQ=255)

                                        gATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGct                                                 >  2:3474116/1‑93 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                <  2:3377551/93‑1 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                >  1:2038863/1‑93 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                >  2:2167364/1‑93 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                >  2:5531030/1‑93 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                >  1:635799/1‑93 (MQ=255)

                                         aTCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctc                                                <  1:4245703/93‑1 (MQ=255)

                                          tCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctct                                               >  1:805304/1‑93 (MQ=255)

                                          tCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctct                                               >  1:5863854/1‑93 (MQ=255)

                                          tCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGctct                                               <  1:4652000/93‑1 (MQ=255)

                                            cccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgt                                             >  2:3568806/1‑93 (MQ=255)

                                             ccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgtt                                            <  1:545755/93‑1 (MQ=255)

                                             ccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgtt                                            <  2:567649/93‑1 (MQ=255)

                                             ccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgtt                                            <  1:4673729/93‑1 (MQ=255)

                                             ccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgtt                                            >  1:5719543/1‑93 (MQ=255)

                                             ccTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgtt                                            >  2:4112491/1‑93 (MQ=255)

                                               tgctgcCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgttgt                                          >  2:1245856/1‑93 (MQ=255)

                                               tgctgcCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCtgttgt                                          <  1:3279870/93‑1 (MQ=255)

                                                     cacaATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACtt                                    <  2:2049673/93‑1 (MQ=255)

                                                     cacaATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACtt                                    >  1:4923823/1‑93 (MQ=255)

                                                      acaATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACttt                                   <  1:2911467/93‑1 (MQ=255)

                                                      acaATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACttt                                   <  1:2420012/93‑1 (MQ=255)

                                                      acaAGGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACttt                                   <  1:3212094/93‑1 (MQ=255)

                                                       caATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTc                                  <  1:3544063/93‑1 (MQ=255)

                                                       caATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTc                                  <  1:2791002/93‑1 (MQ=255)

                                                        aaTGAACGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCg                                 <  1:4715859/93‑1 (MQ=255)

                                                             aCGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGgcgag                            <  1:1863468/93‑1 (MQ=255)

                                                             aCGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGgcgag                            >  1:409855/1‑93 (MQ=255)

                                                             aCGCGCCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGgcgag                            >  2:480222/1‑93 (MQ=255)

                                                                cgcCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGgcgagcga                         >  2:4141809/1‑93 (MQ=255)

                                                                cgcCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGgcgagcga                         <  1:1133569/93‑1 (MQ=255)

                                                                 gcCTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGaa                        >  2:3583232/1‑93 (MQ=255)

                                                                  ccTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAAc                       <  2:1546111/93‑1 (MQ=255)

                                                                  ccTGTGCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAAc                       <  1:1103011/93‑1 (MQ=255)

                                                                    tgtgCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCg                     <  1:4718382/93‑1 (MQ=255)

                                                                     gtgCTGCGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCgg                    >  2:5803178/1‑93 (MQ=255)

                                                                       gctgcGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTa                  >  1:4567336/1‑93 (MQ=255)

                                                                        ctgcGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTAt                 <  2:398975/93‑1 (MQ=255)

                                                                           cGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTaa              <  2:3238015/93‑1 (MQ=255)

                                                                           cGTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGCGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTaa              <  2:4848817/93‑1 (MQ=255)

                                                                            gTCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAAc             >  2:2073816/1‑93 (MQ=255)

                                                                             tCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAAcc            >  2:167190/1‑93 (MQ=255)

                                                                             tCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAAcc            >  2:6472608/1‑93 (MQ=255)

                                                                             tCAAGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAAcc            <  1:1806032/93‑1 (MQ=255)

                                                                                aGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACcagc         >  1:6488905/1‑93 (MQ=255)

                                                                                aGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACcagc         <  1:6230687/93‑1 (MQ=255)

                                                                                aGGCCACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAAAcaga         >  1:6183209/1‑92 (MQ=255)

                                                                                   ccACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAgg      <  2:6177974/93‑1 (MQ=255)

                                                                                    cACCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAGGc     <  1:5164794/93‑1 (MQ=255)

                                                                                     aCCGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAGGCg    >  1:681529/1‑93 (MQ=255)

                                                                                       cGCCTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAGGCGaa  <  2:4982896/93‑1 (MQ=255)

CATAAGAGACAATTACCGGCGGCATCGGGCGTTTAGGGTCGATCCCCTGCTGCCACAATGAACGCGCCTGTGCTGCGTCAAGGCCACCGCTTTGCGTTAGCGCAATACGAGGGATGGCGTGACTGTAACCGCTCTGTTGTGTACTTTCGGCGAGCGAACCGGTATTAACCAGCAGGCGAA  >  NC_000913/3679216‑3679395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`