Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,697,555 G→A intergenic (+33/‑637) yhjU → / → yhjV hypothetical protein/putative transporter protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,697,5550GA100.0% 840.7 / NA 224intergenic (+33/‑637)yhjU/yhjVhypothetical protein/putative transporter protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (141/83);  total (141/83)

Only 100 of 229 total aligned reads displayed.

CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACT  >  NC_000913/3697465‑3697644
                                                                                          |                                                                                         
ccAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGc                                                                                         >  2:3406832/1‑93 (MQ=255)
ccAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGc                                                                                         >  1:3707085/1‑93 (MQ=255)
ccAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGc                                                                                         >  2:3292622/1‑93 (MQ=255)
 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGcc                                                                                        >  1:5636736/1‑93 (MQ=255)
 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGcc                                                                                        <  1:5542331/93‑1 (MQ=255)
 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGcc                                                                                        >  2:5982220/1‑93 (MQ=255)
 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGcc                                                                                        <  2:2325714/93‑1 (MQ=255)
  aGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCt                                                                                       <  2:6673801/93‑1 (MQ=255)
   ggATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTg                                                                                      >  2:6671317/1‑93 (MQ=255)
     aTAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGt                                                                                    <  1:613456/93‑1 (MQ=255)
      tAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTc                                                                                   <  1:3571665/93‑1 (MQ=255)
      tAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTc                                                                                   >  2:5799372/1‑93 (MQ=255)
      tAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTc                                                                                   >  1:5186214/1‑93 (MQ=255)
       aaaCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTcc                                                                                  <  2:1364343/93‑1 (MQ=255)
        aaCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCg                                                                                 >  1:5337205/1‑93 (MQ=255)
         aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCgg                                                                                >  1:5269188/1‑93 (MQ=255)
         aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCgg                                                                                >  1:5062841/1‑93 (MQ=255)
           cGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGgc                                                                              >  2:3330377/1‑93 (MQ=255)
           cGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGAgc                                                                              >  2:5943269/1‑93 (MQ=255)
            gTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGgcg                                                                             >  1:5525061/1‑93 (MQ=255)
             tACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGCTTCCCCCCTGCAGCCTGGTCCGGgcgc                                                                            >  2:2426594/1‑93 (MQ=255)
                gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCaaa                                                                         >  2:4042310/1‑93 (MQ=255)
                gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCaaa                                                                         >  1:6653363/1‑93 (MQ=255)
                gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCaaa                                                                         >  1:1267760/1‑93 (MQ=255)
                 ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAAt                                                                        <  1:4233872/93‑1 (MQ=255)
                  tCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAAtt                                                                       <  2:5356489/93‑1 (MQ=255)
                     ccTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGcc                                                                    <  2:1796982/93‑1 (MQ=255)
                      cTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCa                                                                   >  2:1631365/1‑93 (MQ=255)
                      cTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCa                                                                   >  2:6472006/1‑93 (MQ=255)
                      cTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCa                                                                   >  2:2398194/1‑93 (MQ=255)
                       tGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCAt                                                                  >  2:2999130/1‑93 (MQ=255)
                       tGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCAt                                                                  <  1:1737729/93‑1 (MQ=255)
                        gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCAtt                                                                 <  2:4346910/93‑1 (MQ=255)
                          aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTAc                                                               >  2:3089922/1‑93 (MQ=255)
                          aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTAc                                                               <  2:4967550/93‑1 (MQ=255)
                             gcggcgACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGc                                                            <  2:4759613/93‑1 (MQ=255)
                                gcgACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGGCCGGTCGCAAATTGCCATTACGGCAGc                                                         >  2:2512887/1‑93 (MQ=255)
                                   aCTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTg                                                      >  1:5424304/1‑93 (MQ=255)
                                   aCTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTg                                                      <  2:2559197/93‑1 (MQ=255)
                                    cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGa                                                     <  2:5682370/93‑1 (MQ=255)
                                    cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGa                                                     >  2:3979149/1‑93 (MQ=255)
                                    cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGa                                                     >  2:6165849/1‑93 (MQ=255)
                                    cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGa                                                     <  1:4636538/93‑1 (MQ=255)
                                      gggTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACg                                                   >  2:2596447/1‑93 (MQ=255)
                                        gTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGcc                                                 >  2:3194933/1‑93 (MQ=255)
                                        gTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGcc                                                 <  1:2758104/93‑1 (MQ=255)
                                         tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGccc                                                <  1:1196282/93‑1 (MQ=255)
                                          gCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCg                                               <  2:3860965/93‑1 (MQ=255)
                                            cTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa                                             <  2:6084037/93‑1 (MQ=255)
                                            cTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa                                             >  1:6637475/1‑93 (MQ=255)
                                             ttACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAt                                            <  2:5214965/93‑1 (MQ=255)
                                              tACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATg                                           >  2:5168850/1‑93 (MQ=255)
                                                 ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGaca                                        >  1:4119005/1‑93 (MQ=255)
                                                   gCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGTCATTACGGCAGCCTAACGCCCGCATGACACg                                      >  1:2309785/1‑93 (MQ=255)
                                                    cAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGt                                     <  2:697966/93‑1 (MQ=255)
                                                    cAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGt                                     >  1:4884685/1‑93 (MQ=255)
                                                     aGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGtt                                    >  2:1898109/1‑93 (MQ=255)
                                                     aGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGtt                                    >  1:574005/1‑93 (MQ=255)
                                                      gTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                   <  1:4114225/93‑1 (MQ=255)
                                                      gTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                   >  1:4576486/1‑93 (MQ=255)
                                                       tAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTAc                                  >  2:1187655/1‑93 (MQ=255)
                                                            aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCg                             <  1:1057214/93‑1 (MQ=255)
                                                            aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCg                             >  1:6009861/1‑93 (MQ=255)
                                                              gAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACTCGTTACTTCCGCt                           <  1:1888307/93‑1 (MQ=255)
                                                              gAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCt                           <  1:1017464/93‑1 (MQ=255)
                                                              gAAAAAGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCt                           >  2:1413132/1‑93 (MQ=255)
                                                               aaaaaGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCtt                          >  2:1917680/1‑93 (MQ=255)
                                                               aaaaaGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCtt                          <  2:5925949/93‑1 (MQ=255)
                                                                 aaaGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGt                        <  2:4602922/93‑1 (MQ=255)
                                                                 aaaGGCCGCAGAGTTTCCACCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACCGGTTACATTCGCtttt                        >  1:998531/1‑91 (MQ=25)
                                                                  aaGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGtt                       <  1:641205/93‑1 (MQ=255)
                                                                  aaGGCCGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGtc                       >  2:1223385/1‑92 (MQ=255)
                                                                      ccGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGc                   >  1:1659544/1‑93 (MQ=255)
                                                                       cGCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGcc                  >  1:2645513/1‑93 (MQ=255)
                                                                        gCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCa                 >  2:4212487/1‑93 (MQ=255)
                                                                        gCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCa                 >  2:4724552/1‑93 (MQ=255)
                                                                        gCAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCa                 <  1:3653998/93‑1 (MQ=255)
                                                                         cAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                <  1:2428980/93‑1 (MQ=255)
                                                                         cAGAGTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                >  1:1085442/1‑93 (MQ=255)
                                                                           gagTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt              >  1:2628856/1‑93 (MQ=255)
                                                                           gagTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt              >  1:3133425/1‑93 (MQ=255)
                                                                            agTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTc             <  2:2167865/93‑1 (MQ=255)
                                                                             gTTTCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTAACCCAGTTcc            >  2:6287184/1‑92 (MQ=38)
                                                                              tttCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCAc           <  2:4673245/93‑1 (MQ=255)
                                                                              tttCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCAc           <  1:1524820/93‑1 (MQ=255)
                                                                               ttCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACg          <  1:3807280/93‑1 (MQ=255)
                                                                                tCCCCCCTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGa         >  2:537672/1‑93 (MQ=255)
                                                                                 ccccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGAt        >  2:6351972/1‑93 (MQ=255)
                                                                                  cccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATc       >  2:4423965/1‑93 (MQ=255)
                                                                                  cccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATc       >  1:1616068/1‑93 (MQ=255)
                                                                                  cccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATc       >  2:6387777/1‑93 (MQ=255)
                                                                                  cccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTAACCCAGTTACCGATc       >  1:288306/1‑93 (MQ=37)
                                                                                   ccccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCa      >  1:2149747/1‑93 (MQ=255)
                                                                                    cccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCAt     >  1:3970778/1‑93 (MQ=255)
                                                                                    cccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCAt     <  2:6591814/93‑1 (MQ=255)
                                                                                     ccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATa    <  1:2273038/93‑1 (MQ=255)
                                                                                     ccTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATa    >  2:443742/1‑93 (MQ=255)
                                                                                      cTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATAc   >  1:1795583/1‑93 (MQ=255)
                                                                                      cTGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATAc   <  2:2649654/93‑1 (MQ=255)
                                                                                       tGCAGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCGGCCAGTTCACGATCATACt  <  2:1210831/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACT  >  NC_000913/3697465‑3697644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑