BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,739,740	A→G	M141T (ATG→ACG)	yiaJ ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,739,740	0	A	G	100.0%	891.9 / NA	276	M141T (ATG→ACG)	yiaJ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (142/134); total (142/134)

Only 100 of 289 total aligned reads displayed.

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

 aGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTcc                                                                                        <  1:1463952/93‑1 (MQ=255)

  gTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTccc                                                                                       <  2:4217100/93‑1 (MQ=255)

  gTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTccc                                                                                       <  2:3806913/93‑1 (MQ=255)

  gTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTccc                                                                                       <  1:3065339/93‑1 (MQ=255)

    ccGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCgg                                                                                     <  1:4468506/93‑1 (MQ=255)

     cGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGt                                                                                    <  1:5365645/93‑1 (MQ=255)

     cGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGt                                                                                    <  1:5249972/93‑1 (MQ=255)

     cGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGt                                                                                    <  1:2120756/93‑1 (MQ=255)

        gTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgt                                                                                 >  2:496606/1‑93 (MQ=255)

           aCCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTggg                                                                              <  1:2187777/93‑1 (MQ=255)

            ccAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGt                                                                             >  2:841741/1‑93 (MQ=255)

             cAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGtt                                                                            <  2:3301725/93‑1 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          <  1:882338/93‑1 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          >  2:290560/1‑93 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          <  1:6569818/93‑1 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          >  1:5590045/1‑93 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcaa                                                                         >  1:3850074/1‑91 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  1:3608199/93‑1 (MQ=255)

                 cGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAg                                                                        >  1:5320511/1‑93 (MQ=255)

                  gCCATGTAGATCTTGCCCATTGCGGACCAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc                                                                       <  2:4061460/93‑1 (MQ=255)

                   ccATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCt                                                                      <  2:1888264/93‑1 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  2:1296482/1‑93 (MQ=255)

                        tAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaa                                                                 >  1:1825076/1‑93 (MQ=255)

                         aGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaaa                                                                >  2:5712787/1‑93 (MQ=255)

                          gATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAt                                                               >  1:4159677/1‑93 (MQ=255)

                           ctCTTGCCCATTGCGTAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              <  2:2436080/92‑1 (MQ=255)

                           aTCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              >  2:1824431/1‑93 (MQ=255)

                            tCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCa                                                             >  1:916108/1‑93 (MQ=255)

                               tGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaaa                                                          >  2:2646275/1‑93 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         >  1:105785/1‑93 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  2:148724/93‑1 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  2:6223649/93‑1 (MQ=255)

                                 cccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATa                                                        >  2:6125797/1‑93 (MQ=255)

                                  ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg                                                       >  1:4752587/1‑93 (MQ=255)

                                  ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg                                                       >  1:2885988/1‑93 (MQ=255)

                                   cATTGCGGACCAGTAGAGCGGCATACGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      <  1:1553249/93‑1 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      <  1:1677315/93‑1 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      >  2:586999/1‑93 (MQ=255)

                                    aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGTAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg                                                     <  2:3561358/93‑1 (MQ=255)

                                    aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg                                                     <  1:1100596/93‑1 (MQ=255)

                                    aTTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCg                                                     >  2:4421432/1‑93 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    >  2:2867541/1‑93 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    >  1:5259302/1‑93 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    <  2:3469175/93‑1 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    <  2:4535254/93‑1 (MQ=255)

                                      tGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTg                                                   <  1:6170845/93‑1 (MQ=255)

                                      tGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTg                                                   <  2:3188935/93‑1 (MQ=255)

                                       gCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGa                                                  >  1:5079282/1‑93 (MQ=255)

                                        cGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAt                                                 <  2:5784502/93‑1 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               >  2:3682989/1‑93 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               <  2:5452445/93‑1 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGGTCCAGCTTATAAATCAAAATAGCGTGATCg                                               >  2:2957597/1‑93 (MQ=255)

                                             cAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCt                                            <  2:252939/93‑1 (MQ=255)

                                              aGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCtt                                           <  1:3679702/93‑1 (MQ=255)

                                               gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          >  2:6677414/1‑93 (MQ=255)

                                               gTAGAGCAGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          >  2:3015379/1‑93 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        <  1:2033690/93‑1 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        >  1:1278183/1‑93 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        >  1:2415576/1‑93 (MQ=255)

                                                  gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgcg                                       >  1:2809494/1‑93 (MQ=255)

                                                  gagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGGTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgcg                                       >  1:2705127/1‑93 (MQ=255)

                                                    gCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGc                                     >  2:2213712/1‑93 (MQ=255)

                                                    gCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGc                                     >  1:3464283/1‑93 (MQ=255)

                                                    gCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGc                                     >  1:5738935/1‑93 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   <  1:1909946/93‑1 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGGTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   >  1:6291240/1‑93 (MQ=255)

                                                       gCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTgg                                  <  1:6686346/93‑1 (MQ=255)

                                                       gCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTgg                                  <  1:1774992/93‑1 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTggg                                 >  1:5833747/1‑92 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 <  2:1975444/93‑1 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 <  2:6293603/93‑1 (MQ=255)

                                                         atatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgag                                >  1:6439699/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               >  2:4797876/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               <  2:5261197/93‑1 (MQ=255)

                                                          tatGCTGGACAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATGAAAATAGCGTGATCGTCTTAGCGGCTGgaga                               >  1:3629084/1‑93 (MQ=255)

                                                           atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa                              >  1:1377770/1‑93 (MQ=255)

                                                           atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa                              >  2:5128945/1‑93 (MQ=255)

                                                           atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa                              <  1:2463310/93‑1 (MQ=255)

                                                           atGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGaa                              <  2:1699738/93‑1 (MQ=255)

                                                                ggCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTaa                         <  1:4608224/93‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT‑TAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATg                       >  1:4084935/1‑93 (MQ=255)

                                                                  ccAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATg                       <  2:3430520/93‑1 (MQ=255)

                                                                    aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGGAGTTAATGGt                     >  1:1182515/1‑93 (MQ=255)

                                                                    aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGt                     <  2:3944823/93‑1 (MQ=255)

                                                                     atatAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGtt                    >  1:5010632/1‑93 (MQ=255)

                                                                        taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 >  1:3972373/1‑93 (MQ=255)

                                                                        taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 >  1:3227816/1‑93 (MQ=255)

                                                                          ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc               <  2:4467476/93‑1 (MQ=255)

                                                                          ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc               >  1:288950/1‑93 (MQ=255)

                                                                          ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc               <  2:736642/93‑1 (MQ=255)

                                                                             aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAgg            >  1:3177127/1‑92 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           >  2:1064651/1‑93 (MQ=255)

                                                                                   tCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAt      <  2:2978176/93‑1 (MQ=255)

                                                                                   tCGCAGCGTCCCGGTTGTGGGTTCCAACGTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGAt      <  2:2061398/93‑1 (MQ=255)

                                                                                    cGCAGCGTCCCGGTTGTGGGGTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCACTGGCGATg     >  1:822070/1‑93 (MQ=255)

                                                                                     gcagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGt    >  2:5465656/1‑93 (MQ=255)

                                                                                     gcagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGt    >  2:6543468/1‑93 (MQ=255)

                                                                                      cagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGtt   >  1:5449737/1‑93 (MQ=255)

                                                                                       agcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTc  >  2:4015124/1‑93 (MQ=255)

                                                                                       agcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGGTc  >  2:2832590/1‑93 (MQ=255)

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`