BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	458,228	T→C	C39C (TGT→TGC)	lon →	ATP‑dependent protease La

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	458,228	0	T	C	100.0%	741.1 / NA	228	C39C (TGT→TGC)	lon	ATP‑dependent protease La
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/119); total (109/119)

Only 100 of 233 total aligned reads displayed.

TGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCTTTT  >  NC_000913/458138‑458317

tGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCt                                                                                         >  1:1597849/1‑93 (MQ=255)

    aTCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGaa                                                                                     >  2:3632298/1‑93 (MQ=255)

     tCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAg                                                                                    >  1:3170755/1‑93 (MQ=255)

     tCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAg                                                                                    >  2:3119918/1‑93 (MQ=255)

     tCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAg                                                                                    <  2:4071489/93‑1 (MQ=255)

      ccccGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgc                                                                                   <  2:5577059/93‑1 (MQ=255)

      ccccGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgc                                                                                   >  1:5728502/1‑93 (MQ=255)

      ccccGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgc                                                                                   <  2:2390052/93‑1 (MQ=255)

       cccGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgcg                                                                                  <  2:1272922/93‑1 (MQ=255)

        ccGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgcgg                                                                                 >  1:1547775/1‑93 (MQ=255)

         cGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgcggc                                                                                <  2:5905363/93‑1 (MQ=255)

         cGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgcggc                                                                                <  1:4015375/93‑1 (MQ=255)

          gTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAgcggcg                                                                               >  2:3297597/1‑93 (MQ=255)

           tATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGa                                                                              <  2:459249/93‑1 (MQ=255)

           tATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGa                                                                              <  2:2042579/93‑1 (MQ=255)

            aTTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGAt                                                                             >  1:4268007/1‑93 (MQ=255)

            aTTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGAt                                                                             >  1:5155557/1‑93 (MQ=255)

            aTTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGAt                                                                             >  1:1935966/1‑93 (MQ=255)

            aTTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGAt                                                                             <  2:728350/93‑1 (MQ=255)

            aTTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTCGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGAt                                                                             <  2:1336626/93‑1 (MQ=255)

             ttGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATg                                                                            <  1:919658/93‑1 (MQ=255)

             ttGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATg                                                                            <  1:3321722/93‑1 (MQ=255)

              tGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATgg                                                                           <  2:2695478/93‑1 (MQ=255)

                  gCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCa                                                                       >  1:1851209/1‑93 (MQ=255)

                  gCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCa                                                                       >  1:1234027/1‑93 (MQ=255)

                   cTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCAt                                                                      >  2:4894310/1‑93 (MQ=255)

                    tGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATg                                                                     >  2:3985993/1‑93 (MQ=255)

                     gcgcGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGa                                                                    <  1:4420402/93‑1 (MQ=255)

                       gcgATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATa                                                                  <  2:952458/93‑1 (MQ=255)

                       gcgATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATa                                                                  >  1:218493/1‑93 (MQ=255)

                         gATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATaaa                                                                >  1:4921809/1‑93 (MQ=255)

                         gATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATaaa                                                                <  2:2632913/93‑1 (MQ=255)

                          aTGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATaaaa                                                               >  1:2530593/1‑93 (MQ=255)

                           tgtgGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATaaaaa                                                              >  1:5052112/1‑93 (MQ=255)

                             ttgtggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATaaaaaaa                                                            <  2:4334268/91‑1 (MQ=255)

                              ggtggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAAt                                                           <  1:3111885/93‑1 (MQ=255)

                              ggtggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAAt                                                           >  2:5607632/1‑93 (MQ=255)

                               gtggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAAtt                                                          >  2:2992166/1‑93 (MQ=255)

                                tggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTa                                                         <  1:1365152/93‑1 (MQ=255)

                                tggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTa                                                         <  2:3412338/93‑1 (MQ=255)

                                tggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTa                                                         <  2:5467268/93‑1 (MQ=255)

                                 ggtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTAt                                                        <  2:6001153/93‑1 (MQ=255)

                                  gtTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATg                                                       <  2:3922767/93‑1 (MQ=255)

                                   tttATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGc                                                      >  2:2190662/1‑93 (MQ=255)

                                     tATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTg                                                    >  1:5986400/1‑93 (MQ=255)

                                      aTCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTgg                                                   <  1:5245228/93‑1 (MQ=255)

                                      aTCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTgg                                                   >  2:3385158/1‑93 (MQ=255)

                                       tCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTggc                                                  >  2:5320122/1‑92 (MQ=255)

                                       tCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGt                                                  >  2:2370153/1‑93 (MQ=255)

                                       tCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGt                                                  >  1:5209293/1‑93 (MQ=255)

                                        ccGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTc                                                 <  2:1091261/93‑1 (MQ=255)

                                         cGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTcg                                                >  1:6140881/1‑93 (MQ=255)

                                          gCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTcgc                                               <  1:2643293/93‑1 (MQ=255)

                                          gCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTcgc                                               <  2:3078270/93‑1 (MQ=255)

                                            acaTGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCgcgc                                             >  1:738185/1‑93 (MQ=255)

                                            acaTGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCgcgc                                             <  2:1928758/93‑1 (MQ=255)

                                             caTGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCa                                            <  1:2586301/93‑1 (MQ=255)

                                             caTGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCa                                            >  2:3179520/1‑93 (MQ=255)

                                             caTGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCa                                            <  2:579939/93‑1 (MQ=255)

                                                ggTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCagaa                                         >  1:5656414/1‑93 (MQ=255)

                                                 gTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCagaaa                                        <  1:2916041/93‑1 (MQ=255)

                                                   cATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCagaaaga                                      <  1:1165176/93‑1 (MQ=255)

                                                      ccccTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGc                                   <  2:1468595/93‑1 (MQ=255)

                                                       cccTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCt                                  <  2:4765860/93‑1 (MQ=255)

                                                       cccTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCt                                  <  2:799730/93‑1 (MQ=255)

                                                       cccTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCt                                  <  2:3829032/93‑1 (MQ=255)

                                                         cTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTc                                <  2:1766024/93‑1 (MQ=255)

                                                         cTTATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAACAAGCTTc                                <  1:6366724/93‑1 (MQ=255)

                                                           tATTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCaa                              <  1:5629954/93‑1 (MQ=255)

                                                            aTTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAAc                             <  1:6703197/93‑1 (MQ=255)

                                                            aTTTGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAAc                             <  2:1026656/93‑1 (MQ=255)

                                                             tttGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACg                            >  2:6296659/1‑93 (MQ=255)

                                                             tttGTCGGGCGGGAAAAATCTATCCGTTGCCTGGAAGCGGCGACGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACg                            >  1:4568928/1‑93 (MQ=255)

                                                                  cgggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGa                       >  2:3481665/1‑93 (MQ=255)

                                                                  cgggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGa                       <  2:4446539/93‑1 (MQ=255)

                                                                  cgggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGa                       <  1:3533714/93‑1 (MQ=255)

                                                                   gggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAg                      >  2:6512613/1‑93 (MQ=255)

                                                                   gggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAg                      >  1:3550685/1‑93 (MQ=255)

                                                                   gggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAg                      >  2:5177883/1‑93 (MQ=255)

                                                                    ggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGc                     >  1:4864488/1‑93 (MQ=255)

                                                                    ggcgggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGc                     <  2:5039194/93‑1 (MQ=255)

                                                                    ggcggaAAAAATCTATCCGTTGCCGGGAAGCGGCGATGAACAATGA‑AAAAAAAATATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGcc                    <  1:3163696/93‑1 (MQ=255)

                                                                       gggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCgg                  >  2:6486907/1‑93 (MQ=255)

                                                                       gggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCgg                  <  1:1034459/93‑1 (MQ=255)

                                                                       gggAAAAATCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCgg                  >  1:6447808/1‑93 (MQ=255)

                                                                           aaaaTCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGgtgt              >  2:1039637/1‑93 (MQ=255)

                                                                              aTCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTaaa           >  1:2130858/1‑93 (MQ=255)

                                                                               tCTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAAc          >  1:6671180/1‑93 (MQ=255)

                                                                                cTATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACg         >  1:6222978/1‑93 (MQ=255)

                                                                                 tATCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGa        >  1:3093734/1‑93 (MQ=255)

                                                                                  aTCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGTCGGGTGTAAACGAt       <  1:1729526/93‑1 (MQ=255)

                                                                                  aTCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGAt       <  1:3873414/93‑1 (MQ=255)

                                                                                  aTCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGAt       <  1:3186887/93‑1 (MQ=255)

                                                                                   tCCGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATc      <  2:2747840/93‑1 (MQ=255)

                                                                                    ccGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCt     <  2:420786/93‑1 (MQ=255)

                                                                                    ccGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCt     <  1:188781/93‑1 (MQ=255)

                                                                                     cGTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCtt    <  1:3491290/93‑1 (MQ=255)

                                                                                      gTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCttt   >  2:368307/1‑93 (MQ=255)

                                                                                      gTTGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCttt   >  2:3427570/1‑93 (MQ=255)

                                                                                       ttGCCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCtttt  >  1:2995461/1‑93 (MQ=255)

TGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCTTTT  >  NC_000913/458138‑458317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`