BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,787,263	C→G	G149A (GGC→GCC)	yibD ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,787,263	0	C	G	100.0%	734.1 / NA	229	G149A (GGC→GCC)	yibD	putative regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (135/94); total (135/94)

Only 100 of 239 total aligned reads displayed.

TTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAC  >  NC_000913/3787173‑3787352

tttttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCg                                                                                         <  1:5428746/93‑1 (MQ=255)

  tttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGt                                                                                       <  2:6328582/93‑1 (MQ=255)

  tttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGt                                                                                       <  2:5012089/93‑1 (MQ=255)

   ttAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGtt                                                                                      >  1:1667465/1‑93 (MQ=255)

     aaCAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTaa                                                                                    <  1:1485236/93‑1 (MQ=255)

      aCAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAAt                                                                                   >  2:4454140/1‑93 (MQ=255)

        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 >  1:3074377/1‑93 (MQ=255)

        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 >  2:342990/1‑93 (MQ=255)

        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 >  2:5485951/1‑93 (MQ=255)

        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 >  2:5241709/1‑93 (MQ=255)

        aaTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATAc                                                                                 <  2:6586093/93‑1 (MQ=255)

         aTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                >  1:6582971/1‑93 (MQ=255)

         aTAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACg                                                                                >  1:3975848/1‑93 (MQ=255)

          tAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGc                                                                               >  1:3624742/1‑93 (MQ=255)

          tAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGc                                                                               >  1:3240344/1‑93 (MQ=255)

           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              <  1:3672247/93‑1 (MQ=255)

           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              <  1:5368683/93‑1 (MQ=255)

           aaCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGcc                                                                              >  2:3232494/1‑93 (MQ=255)

            aCATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCg                                                                             >  1:23125/1‑93 (MQ=255)

              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           <  2:847945/93‑1 (MQ=255)

              aTCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGt                                                                           >  1:4694286/1‑93 (MQ=255)

               tCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGtt                                                                          >  2:4679436/1‑93 (MQ=255)

               tCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGtt                                                                          >  1:4108023/1‑93 (MQ=255)

               tCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGACCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGtt                                                                          >  2:1593969/1‑93 (MQ=255)

                 aCGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGa                                                                        >  2:2519274/1‑93 (MQ=255)

                  cGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAg                                                                       >  2:5216227/1‑93 (MQ=255)

                   ggCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGc                                                                      <  2:2660113/93‑1 (MQ=255)

                    gCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCg                                                                     <  2:6677177/93‑1 (MQ=255)

                    gCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCg                                                                     <  1:3021656/93‑1 (MQ=255)

                      gATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGaa                                                                   >  2:4947305/1‑93 (MQ=255)

                        tAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAgg                                                                 >  1:1958912/1‑93 (MQ=255)

                        tAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAgg                                                                 <  2:420178/93‑1 (MQ=255)

                         aaaCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGc                                                                <  2:5609150/93‑1 (MQ=255)

                          aaCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCg                                                               >  1:1787516/1‑93 (MQ=255)

                          aaCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAAAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCg                                                               >  2:6648760/1‑93 (MQ=255)

                           aCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGa                                                              <  1:1988190/93‑1 (MQ=255)

                           aCCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAACACGCCGGTTGAGCGAAGGCGa                                                              <  1:4242634/93‑1 (MQ=255)

                            cccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAt                                                             <  2:1221506/93‑1 (MQ=255)

                            cccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGAt                                                             <  2:5531687/93‑1 (MQ=255)

                             ccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATc                                                            >  1:4814159/1‑93 (MQ=255)

                             ccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATc                                                            <  1:5394447/93‑1 (MQ=255)

                             ccccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATc                                                            >  1:3472538/1‑93 (MQ=255)

                              cccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           >  2:6242917/1‑93 (MQ=255)

                              cccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCg                                                           >  1:3537225/1‑93 (MQ=255)

                               ccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCgg                                                          >  2:60804/1‑93 (MQ=255)

                               ccATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCgg                                                          <  1:98174/93‑1 (MQ=255)

                                  tCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTgg                                                       >  1:1003700/1‑93 (MQ=255)

                                   ccAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTggg                                                      <  1:2763634/93‑1 (MQ=255)

                                   ccAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTggg                                                      <  2:4131714/93‑1 (MQ=255)

                                    cAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTgggg                                                     >  1:4599392/1‑93 (MQ=255)

                                     aGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGgga                                                    <  2:4624295/93‑1 (MQ=255)

                                     aGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGgga                                                    <  1:5574560/93‑1 (MQ=255)

                                      gACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggat                                                   >  2:197743/1‑93 (MQ=255)

                                       aCAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatg                                                  >  2:6466885/1‑93 (MQ=255)

                                       aCAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatg                                                  >  2:2828897/1‑93 (MQ=255)

                                       aCAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatg                                                  <  2:6117688/93‑1 (MQ=255)

                                        cAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATGCGCCGGTTGAGCGAAGGCGATCGGTGGggatgg                                                 <  1:5910465/93‑1 (MQ=255)

                                        cAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatgg                                                 >  2:6277654/1‑93 (MQ=255)

                                        cAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGggatgg                                                 >  1:4415918/1‑93 (MQ=255)

                                           cGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGAtt                                              <  2:6311432/93‑1 (MQ=255)

                                            gTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTg                                             >  1:2760578/1‑93 (MQ=255)

                                              gAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGcc                                           <  1:2639349/93‑1 (MQ=255)

                                              gAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGcc                                           <  1:3567259/93‑1 (MQ=255)

                                              gAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGcc                                           >  2:111803/1‑93 (MQ=255)

                                              gAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGcc                                           <  2:485713/93‑1 (MQ=255)

                                                gTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAg                                         >  2:5139203/1‑93 (MQ=255)

                                                gTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAg                                         <  1:730398/93‑1 (MQ=255)

                                                 tCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAgg                                        >  2:1450644/1‑93 (MQ=255)

                                                 tCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAgg                                        <  1:378955/93‑1 (MQ=255)

                                                 tCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAgg                                        <  2:3524233/93‑1 (MQ=255)

                                                    aaCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGttt                                     >  2:3630631/1‑93 (MQ=255)

                                                     aCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtc                                    <  2:214103/93‑1 (MQ=255)

                                                     aCGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtc                                    >  2:2915483/1‑93 (MQ=255)

                                                      cGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtct                                   >  1:3929654/1‑93 (MQ=255)

                                                      cGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTtct                                   >  1:339277/1‑93 (MQ=255)

                                                        gcgcGAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTcc                                 >  1:2356705/1‑93 (MQ=255)

                                                          gcgAAGAAAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCg                               <  2:4594121/93‑1 (MQ=255)

                                                            gaagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGtt                             <  1:1634307/93‑1 (MQ=255)

                                                            gaagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGtt                             >  1:2578994/1‑93 (MQ=255)

                                                             aagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGttt                            <  1:6343011/93‑1 (MQ=255)

                                                             aagaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGttt                            >  2:1080145/1‑93 (MQ=255)

                                                               gaaAGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCa                          >  2:2407000/1‑93 (MQ=255)

                                                                aaaGCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTTCCGTTTCAc                         >  1:6704016/1‑93 (MQ=255)

                                                                   gCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaa                      >  1:602749/1‑93 (MQ=255)

                                                                   gCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaa                      >  2:5300905/1‑93 (MQ=255)

                                                                   gCCCCATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGaa                      >  2:1371280/1‑93 (MQ=255)

                                                                       cATCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAaca                  >  2:5675415/1‑93 (MQ=255)

                                                                         tCCGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACAcc                >  1:876917/1‑93 (MQ=255)

                                                                          ccGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCa               <  2:5065253/93‑1 (MQ=255)

                                                                           cGCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCCGGTTTCTCCCGTTTCACGAAAACACCAg              >  1:4988377/1‑93 (MQ=255)

                                                                            gCAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGt             >  2:588323/1‑93 (MQ=255)

                                                                             cAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTc            <  2:870480/93‑1 (MQ=255)

                                                                             cAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTc            <  2:4344891/93‑1 (MQ=255)

                                                                             cAGCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTc            <  1:1395506/93‑1 (MQ=255)

                                                                               gCCAGTCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAg          >  1:2860424/1‑93 (MQ=255)

                                                                                    tCCGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTg     >  1:242699/1‑93 (MQ=255)

                                                                                     ccGGGGCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGc    >  1:4915108/1‑93 (MQ=255)

                                                                                       ggggCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAc  <  2:3989911/93‑1 (MQ=255)

                                                                                       ggggCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAc  <  2:3344272/93‑1 (MQ=255)

                                                                                       ggggCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAc  <  1:624205/93‑1 (MQ=255)

TTTTTAACAATAACATCACGGCGATAAACCCCCATCCAGACAACGTGAGTCCAACGGCGCGAAGAAAGCCCCATCCGCAGCCAGTCCGGGCCGGTTAATACGCCGGTTGAGCGAAGGCGATCGGTGGGGATGGATTGCCAGGTTTCTCCCGTTTCACGAAAACACCAGTCAGCGTTGCAC  >  NC_000913/3787173‑3787352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`