BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,837,057	G→A	L188L (CTC→CTT)	nlpA ←	lipoprotein‑28

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,837,057	0	G	A	100.0%	988.9 / NA	263	L188L (CTC→CTT)	nlpA	lipoprotein‑28
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (126/137); total (126/137)

Only 100 of 268 total aligned reads displayed.

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGc                                                                                        <  2:4208951/93‑1 (MQ=255)

  tGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCt                                                                                       >  2:6237525/1‑93 (MQ=255)

   gTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTg                                                                                      >  2:3915658/1‑93 (MQ=255)

    tCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgc                                                                                     >  2:1060400/1‑93 (MQ=255)

      gTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgcgc                                                                                   >  1:4921682/1‑93 (MQ=255)

      gTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgcgc                                                                                   >  2:5893623/1‑93 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              <  1:819335/93‑1 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              <  1:3471018/93‑1 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              >  1:3073186/1‑93 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              <  1:6057343/93‑1 (MQ=255)

            cGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTc                                                                             <  2:6298117/93‑1 (MQ=255)

            cGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTc                                                                             <  2:4504865/93‑1 (MQ=255)

             ggAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCg                                                                            >  2:3778365/1‑93 (MQ=255)

             ggAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCg                                                                            >  1:2625294/1‑93 (MQ=255)

             ggAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCg                                                                            >  2:658799/1‑93 (MQ=255)

               agaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAg                                                                          <  1:26101/93‑1 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGtt                                                                        <  2:1743200/93‑1 (MQ=255)

                  aaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTc                                                                       >  1:3627996/1‑93 (MQ=255)

                  aaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTc                                                                       >  2:3998467/1‑93 (MQ=255)

                  aaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTc                                                                       >  1:3429274/1‑93 (MQ=255)

                  aaGCCCGGTATGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCACCTCGAGTTc                                                                       >  2:4076513/1‑93 (MQ=255)

                    gCCCGGTCTGCTGAATGTAAGTGGTGCTGATTATCGCTACATCTACTTTGTGATCTTCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCa                                                                     >  2:6734643/1‑93 (MQ=255)

                    gCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCa                                                                     <  2:823496/93‑1 (MQ=255)

                       cGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATaa                                                                  <  1:4482707/93‑1 (MQ=255)

                        ggTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAAt                                                                 >  1:3862294/1‑93 (MQ=255)

                         gTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATc                                                                >  1:1888521/1‑93 (MQ=255)

                          tCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCt                                                               <  2:2126988/93‑1 (MQ=255)

                            tgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGc                                                             >  2:2764500/1‑93 (MQ=255)

                            tgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGc                                                             >  1:3289869/1‑93 (MQ=255)

                              ctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaa                                                           <  1:5540026/93‑1 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          >  2:2836449/1‑93 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          >  1:103296/1‑93 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          <  2:3636872/93‑1 (MQ=255)

                                gAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAAt                                                         >  2:5084291/1‑93 (MQ=255)

                                gAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAAt                                                         <  1:3095922/93‑1 (MQ=255)

                                 aaTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATg                                                        >  1:5024102/1‑93 (MQ=255)

                                 aaTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATg                                                        <  1:1859580/93‑1 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       >  2:2735922/1‑93 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       >  2:2250258/1‑93 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      >  1:4654891/1‑93 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      <  2:5550640/93‑1 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    <  2:4161532/93‑1 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    <  2:1298688/93‑1 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCAGCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    <  1:4096792/93‑1 (MQ=255)

                                       aGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAgg                                                  >  1:5336941/1‑93 (MQ=255)

                                         tggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAt                                                <  2:851530/93‑1 (MQ=255)

                                          ggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAtt                                               <  1:2224299/93‑1 (MQ=255)

                                          ggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAtt                                               >  1:3834708/1‑93 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             >  1:3975637/1‑93 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             <  2:1889373/93‑1 (MQ=255)

                                               tGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCgg                                          <  1:4022467/93‑1 (MQ=255)

                                                gATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGt                                         <  2:3153522/93‑1 (MQ=255)

                                                gATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGt                                         <  1:1248307/93‑1 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        <  1:1172598/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  1:6148934/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  1:2794616/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       >  1:2852074/1‑93 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       >  2:5248998/1‑93 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGCACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  2:4245052/93‑1 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      <  1:5185307/93‑1 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      >  2:2995647/1‑93 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     <  2:1496374/93‑1 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    >  1:3230370/1‑93 (MQ=255)

                                                      cGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATc                                   >  2:4964989/1‑93 (MQ=255)

                                                       gCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATcc                                  <  1:911188/93‑1 (MQ=255)

                                                        cTACATCATCTTTGGTATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 <  1:5764984/93‑1 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 <  2:5835091/93‑1 (MQ=255)

                                                         tACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAg                                >  2:3473032/1‑93 (MQ=255)

                                                         tACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAg                                <  2:6067539/93‑1 (MQ=255)

                                                           cATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgcg                              <  1:243698/93‑1 (MQ=255)

                                                            aTCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgcgc                             <  1:4818582/93‑1 (MQ=255)

                                                             tCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGcgcg                            >  2:5421690/1‑93 (MQ=255)

                                                             tCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGcgcg                            >  2:3950877/1‑93 (MQ=255)

                                                             tCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGcgcg                            >  2:456173/1‑93 (MQ=255)

                                                                aCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggta                         <  2:2639854/93‑1 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        <  2:2430490/93‑1 (MQ=255)

                                                                  tttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       >  1:4411731/1‑93 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggt                      <  2:4668520/93‑1 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCgggagga                      >  1:1354435/1‑92 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     >  1:6343019/1‑93 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     >  1:6119522/1‑93 (MQ=255)

                                                                        atcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaataa                 >  1:2122142/1‑93 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                <  2:5380646/93‑1 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              <  2:4728391/93‑1 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              >  2:4765456/1‑93 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              >  1:3731065/1‑93 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATATGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              >  2:3554529/1‑93 (MQ=255)

                                                                            tcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCt             >  2:3458543/1‑93 (MQ=255)

                                                                            tcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCt             >  1:6302355/1‑93 (MQ=255)

                                                                             ccAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtt            <  1:2242715/93‑1 (MQ=255)

                                                                                  aCGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTccc       <  2:1580657/93‑1 (MQ=255)

                                                                                  aCGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTccc       >  1:1522934/1‑93 (MQ=255)

                                                                                  aCGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTccc       <  2:674627/93‑1 (MQ=255)

                                                                                    gcgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctc     <  2:5329714/93‑1 (MQ=255)

                                                                                    gcgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctc     <  2:1152336/93‑1 (MQ=255)

                                                                                    gcgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctc     <  1:6719238/93‑1 (MQ=255)

                                                                                     cgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctct    <  1:1926456/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  1:2974857/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   >  2:3341720/1‑93 (MQ=255)

                                                                                       cgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCttt  <  2:2007677/93‑1 (MQ=255)

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`