BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,847,491	T→C	L91L (TTA→TTG)	b3668 ←	sensor histidine protein kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,847,491	0	T	C	100.0%	904.8 / NA	273	L91L (TTA→TTG)	b3668	sensor histidine protein kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/144); total (129/144)

Only 100 of 276 total aligned reads displayed.

CGCCGTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATAC  >  NC_000913/3847401‑3847580

  ccgTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAAc                                                                                       <  2:2582279/93‑1 (MQ=255)

  ccgTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAAc                                                                                       >  1:3988775/1‑93 (MQ=255)

  ccgTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAAc                                                                                       >  1:3105179/1‑93 (MQ=255)

     ttAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTAc                                                                                    >  2:2803223/1‑93 (MQ=255)

      tAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTAcc                                                                                   <  2:4005425/93‑1 (MQ=255)

        aCGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGa                                                                                 <  2:5717194/93‑1 (MQ=255)

        aCGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGa                                                                                 >  1:6468680/1‑93 (MQ=255)

        aCGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGa                                                                                 >  2:3016176/1‑93 (MQ=255)

        aCGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGa                                                                                 >  2:408649/1‑93 (MQ=255)

          gccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatc                                                                               <  2:5799744/93‑1 (MQ=255)

          gccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatc                                                                               <  1:2034621/93‑1 (MQ=255)

          gccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatc                                                                               <  2:4947551/93‑1 (MQ=255)

          gccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatc                                                                               >  2:3918507/1‑93 (MQ=255)

           ccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatca                                                                              >  2:2502966/1‑93 (MQ=255)

            cgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatcat                                                                             <  1:6405803/93‑1 (MQ=255)

               ccccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCaa                                                                          <  1:4809011/93‑1 (MQ=255)

               ccccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCaa                                                                          >  2:5056960/1‑93 (MQ=255)

               ccccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCaa                                                                          >  2:3761372/1‑93 (MQ=255)

                cccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAAt                                                                         >  2:5320678/1‑93 (MQ=255)

                 ccTGTAACAGCAAGGTGCGCCGGTCGCGCTGATGGCGATAGCGCGAGATCAGCGCTCCGGACTGTCCCGTCAGCAACCTACCGATCCTCAAtc                                                                        <  1:6722593/93‑2 (MQ=255)

                 ccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATa                                                                        <  1:3809154/93‑1 (MQ=255)

                 ccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATa                                                                        <  1:473259/93‑1 (MQ=255)

                  cTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATaa                                                                       <  2:2013021/93‑1 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      <  1:3111001/93‑1 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      <  2:5194448/93‑1 (MQ=255)

                   tGTAACAGCAAGCTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      <  2:1234339/93‑1 (MQ=255)

                    gTAACAGCAGGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACg                                                                     <  1:2317009/93‑1 (MQ=255)

                     tAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACgg                                                                    <  2:2245697/93‑1 (MQ=255)

                     tAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACgg                                                                    <  1:372936/93‑1 (MQ=255)

                       aCAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACggca                                                                  >  1:536566/1‑91 (MQ=255)

                       aCAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGaa                                                                  <  2:2104325/93‑1 (MQ=255)

                         aGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGaaaa                                                                >  1:337026/1‑93 (MQ=255)

                          gCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAAt                                                               <  1:5327185/93‑1 (MQ=255)

                            aaGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCACTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATgg                                                             <  1:6037073/93‑1 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            >  2:3278851/1‑93 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            <  2:2404377/93‑1 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            >  2:6239565/1‑93 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            <  1:1280552/93‑1 (MQ=255)

                              ggTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGt                                                           <  1:459162/93‑1 (MQ=255)

                              ggTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGt                                                           <  1:631158/93‑1 (MQ=255)

                               gTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGtt                                                          <  1:2229025/93‑1 (MQ=255)

                                tGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTa                                                         <  1:4982052/93‑1 (MQ=255)

                                  cgcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTaaa                                                       >  1:2576678/1‑93 (MQ=255)

                                   gcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAac                                                      <  2:3192370/93‑1 (MQ=255)

                                    ccAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAacc                                                     <  1:3467360/93‑1 (MQ=255)

                                      aGTCACGCTGATGGCGATAGCGCGAGCTCAGCGCTACGCGCAGTAACGTCAGCAAACTCCCGATCATCAATAACGGAAAATGGGTTAAaccga                                                   <  2:5102627/93‑1 (MQ=255)

                                      aGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccga                                                   >  1:1837605/1‑93 (MQ=255)

                                      aGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccga                                                   >  1:1783831/1‑93 (MQ=255)

                                       gTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccgac                                                  <  1:165749/93‑1 (MQ=255)

                                          aCGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGc                                               >  1:719413/1‑93 (MQ=255)

                                           cGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGcc                                              <  2:1397989/93‑1 (MQ=255)

                                           cGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGcc                                              <  1:4373911/93‑1 (MQ=255)

                                            gCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCt                                             <  2:6625853/93‑1 (MQ=255)

                                               gATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTgag                                          <  1:557488/93‑3 (MQ=255)

                                               gATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCg                                          >  1:5784595/1‑93 (MQ=255)

                                               gATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCg                                          >  2:4452722/1‑93 (MQ=255)

                                                 tGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGtt                                        <  1:2423257/93‑1 (MQ=255)

                                                  ggCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTa                                       <  2:4282772/93‑1 (MQ=255)

                                                  ggCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTa                                       >  1:192063/1‑93 (MQ=255)

                                                    cGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGc                                     <  1:1887402/93‑1 (MQ=255)

                                                     gATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGcc                                    >  2:6514191/1‑93 (MQ=255)

                                                     gATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGcc                                    <  2:2842302/93‑1 (MQ=255)

                                                     gATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGcc                                    <  2:265640/93‑1 (MQ=255)

                                                      aTAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCa                                   >  1:3026939/1‑93 (MQ=255)

                                                       tAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAg                                  <  2:665500/93‑1 (MQ=255)

                                                       tAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAg                                  <  1:3319439/93‑1 (MQ=255)

                                                           gcgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTaaa                              <  2:3845179/93‑1 (MQ=255)

                                                             gagaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATc                            <  1:394356/93‑1 (MQ=255)

                                                             gagaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATc                            <  2:3534643/93‑1 (MQ=255)

                                                             gagaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATc                            >  2:5584725/1‑93 (MQ=255)

                                                              agaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATca                           <  2:1901032/93‑1 (MQ=255)

                                                               gaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcag                          >  1:5262281/1‑93 (MQ=255)

                                                               gaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcag                          >  2:1830913/1‑93 (MQ=255)

                                                               gaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcag                          >  1:292228/1‑93 (MQ=255)

                                                                aTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagc                         <  1:2726674/93‑1 (MQ=255)

                                                                aTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagc                         <  2:884981/93‑1 (MQ=255)

                                                                aTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagc                         <  1:6077908/93‑1 (MQ=255)

                                                                 tCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagca                        <  1:3667037/93‑1 (MQ=255)

                                                                    gcgcTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGcc                     >  2:799635/1‑93 (MQ=255)

                                                                      gcTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCAc                   <  1:5883929/93‑1 (MQ=255)

                                                                      gcTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCAc                   <  1:995129/93‑1 (MQ=255)

                                                                       cTACGGGCAGTAACGTCAGCAAACTACCGACCATCACTACCGGAAAATGGGTTAACCCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACt                  <  1:1411258/93‑1 (MQ=255)

                                                                        tACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTc                 <  1:3599676/93‑1 (MQ=255)

                                                                         aCGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTcc                >  1:6359178/1‑93 (MQ=255)

                                                                          cGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcg               <  1:5424618/93‑1 (MQ=255)

                                                                           gggCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc              >  1:939973/1‑93 (MQ=255)

                                                                           gggCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc              >  2:1627395/1‑93 (MQ=255)

                                                                              cAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGcc           <  1:2751287/93‑1 (MQ=255)

                                                                              cAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGcc           <  1:1683360/93‑1 (MQ=255)

                                                                               aGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc          <  2:4632796/93‑1 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         <  2:1486528/93‑1 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         >  1:1602768/1‑93 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         <  2:5501291/93‑1 (MQ=255)

                                                                                 tAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAg        <  2:5756179/93‑1 (MQ=255)

                                                                                  aaCGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGc       >  2:61716/1‑93 (MQ=255)

                                                                                   aCGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCa      >  2:5955420/1‑93 (MQ=255)

                                                                                    cGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCaa     >  1:1875035/1‑93 (MQ=255)

                                                                                    cGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCaa     <  2:2752012/93‑1 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   >  2:4851751/1‑93 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   >  1:1173076/1‑93 (MQ=255)

CGCCGTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATAC  >  NC_000913/3847401‑3847580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`