Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,850,058 G→A G118G (GGC→GGT ilvB ← acetolactate synthase I large subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,850,0580GA99.6% 991.5 / NA 276G118G (GGC→GGTilvBacetolactate synthase I large subunit
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (154/120);  total (154/122)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 282 total aligned reads displayed.

CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT  >  NC_000913/3849968‑3850147
                                                                                          |                                                                                         
cGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAcc                                                                                         >  2:3676323/1‑93 (MQ=255)
   gAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGat                                                                                      >  2:4259950/1‑93 (MQ=255)
    aGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatc                                                                                     >  2:4922454/1‑93 (MQ=255)
    aGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatc                                                                                     >  2:6714971/1‑93 (MQ=255)
     gTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatca                                                                                    <  2:381719/93‑1 (MQ=255)
      ttcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcat                                                                                   <  2:553045/93‑1 (MQ=255)
       tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc                                                                                  <  2:6620591/93‑1 (MQ=255)
         tttgATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa                                                                                <  1:2060205/90‑1 (MQ=255)
         ttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa                                                                                <  1:1350104/93‑1 (MQ=255)
         ttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa                                                                                >  2:5287081/1‑93 (MQ=255)
         ttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGa                                                                                <  1:3001444/93‑1 (MQ=255)
          tcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAg                                                                               <  2:1093382/93‑1 (MQ=255)
           cGATATGTCTGAGCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAgg                                                                              <  2:308890/93‑1 (MQ=255)
           cGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAgg                                                                              <  2:698553/93‑1 (MQ=255)
            gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAggg                                                                             >  1:4137400/1‑92 (MQ=255)
            gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAggg                                                                             >  2:840942/1‑92 (MQ=255)
            gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc                                                                             >  1:5423090/1‑93 (MQ=255)
            gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc                                                                             <  2:546806/93‑1 (MQ=255)
              tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg                                                                           >  2:378129/1‑93 (MQ=255)
              tatGTCTGACCAGATAGTTGTCTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg                                                                           >  1:4241513/1‑93 (MQ=255)
               atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg                                                                          <  1:5349020/93‑1 (MQ=255)
                tGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGa                                                                         >  2:115954/1‑93 (MQ=255)
                tGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGa                                                                         >  1:516592/1‑93 (MQ=255)
                 gTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGaa                                                                        >  1:2122861/1‑93 (MQ=255)
                 gTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGaa                                                                        >  1:4760942/1‑93 (MQ=255)
                 gTCTGACCAGAGAGTTGTGTTTGGTGATGGGGATAGAGATTCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGaa                                                                        <  1:2161343/93‑1 (MQ=255)
                  tCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAc                                                                       >  1:157404/1‑93 (MQ=255)
                   cTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAcc                                                                      <  2:6377838/93‑1 (MQ=255)
                    tGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCt                                                                     <  1:5221887/93‑1 (MQ=255)
                    tGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCt                                                                     <  1:2329723/93‑1 (MQ=255)
                    tGACCAGATAGTGGTGTTTGGTAATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGTCGTCGGTACCGATCATCGAGGCGGGAACCt                                                                     <  1:3441950/93‑1 (MQ=255)
                       ccAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAc                                                                  <  1:4262512/93‑1 (MQ=255)
                       ccAGATAGTTGTGGTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAc                                                                  >  1:2258883/1‑93 (MQ=255)
                        cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc                                                                 <  2:3130115/93‑1 (MQ=255)
                        cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc                                                                 >  2:2118512/1‑93 (MQ=255)
                         aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa                                                                <  2:302976/93‑1 (MQ=255)
                          gATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAg                                                               >  1:1243557/1‑93 (MQ=255)
                          gATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAg                                                               >  1:6133653/1‑93 (MQ=255)
                            tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTg                                                             <  2:1744162/93‑1 (MQ=255)
                             aGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGa                                                            <  1:1097401/93‑1 (MQ=255)
                              gTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAt                                                           >  2:3173371/1‑93 (MQ=255)
                              gTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGCACCGATCATCGAGGCGGGAACCTGACCAGTGAt                                                           >  2:6539341/1‑93 (MQ=255)
                               ttGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTCCCGATCATCGAGGCGGGAACCTGACCAGTGATg                                                          <  1:1776512/93‑1 (MQ=255)
                                tgtgTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGc                                                         <  1:5995134/93‑1 (MQ=255)
                                 gtgtTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCa                                                        <  1:457087/93‑1 (MQ=255)
                                   gtTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCaaa                                                      <  2:6136126/93‑1 (MQ=255)
                                       ggTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAg                                                  >  2:5829697/1‑93 (MQ=255)
                                       ggTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAg                                                  >  2:244940/1‑93 (MQ=255)
                                        gTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGc                                                 <  1:883424/93‑1 (MQ=255)
                                         tGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCg                                                <  1:1447358/93‑1 (MQ=255)
                                          gATGGGGATAGAGATGCCGTAGGTGGCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCgg                                               <  2:4614194/93‑1 (MQ=255)
                                           aTGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCggg                                              >  1:65205/1‑93 (MQ=255)
                                           aTGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCggg                                              >  1:1597255/1‑93 (MQ=255)
                                           aTGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCggg                                              <  2:1773692/93‑1 (MQ=255)
                                            tGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGa                                             <  1:4835568/93‑1 (MQ=255)
                                             ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt                                            <  1:5822006/93‑1 (MQ=255)
                                              gggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATg                                           >  1:4060227/1‑93 (MQ=255)
                                              gggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATg                                           <  1:5528156/93‑1 (MQ=255)
                                               ggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGCGATgg                                          <  1:4340596/93‑1 (MQ=255)
                                                 aTAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAg                                        >  1:3129616/1‑93 (MQ=255)
                                                  tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGt                                       >  1:1006009/1‑93 (MQ=255)
                                                    gagaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGGACCTGACCAGTGATGCAAATCAGCGGGATGGAGTcc                                     >  1:968004/1‑93 (MQ=255)
                                                    gagaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTcc                                     <  2:2869425/93‑1 (MQ=255)
                                                    gagaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTcc                                     <  2:258459/93‑1 (MQ=255)
                                                      gaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGACCAg                                   >  1:3760829/1‑93 (MQ=255)
                                                        tGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGcc                                 >  1:4993907/1‑93 (MQ=255)
                                                        tGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGcc                                 <  2:1612699/93‑1 (MQ=255)
                                                        tGCCGTAGGTGTCAACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGcc                                 <  2:3879828/93‑1 (MQ=255)
                                                             tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa                            >  2:5915691/1‑93 (MQ=255)
                                                              aGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCAt                           >  2:3102378/1‑93 (MQ=255)
                                                              aGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCAt                           >  2:1381837/1‑93 (MQ=255)
                                                              aGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCAt                           <  2:6465259/93‑1 (MQ=255)
                                                               ggTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATc                          >  2:2213007/1‑93 (MQ=255)
                                                               ggTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATc                          <  2:4446169/93‑1 (MQ=255)
                                                                gtgtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCg                         <  1:6381466/93‑1 (MQ=255)
                                                                  gtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGc                       <  2:1115037/93‑1 (MQ=255)
                                                                    ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa                     <  2:3566097/93‑1 (MQ=255)
                                                                    ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa                     <  2:3417800/93‑1 (MQ=255)
                                                                    ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa                     <  2:6249739/93‑1 (MQ=255)
                                                                      aCTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATg                   <  2:617162/93‑1 (MQ=255)
                                                                      aCTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATg                   >  2:2705733/1‑93 (MQ=255)
                                                                       cTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATgg                  >  1:724285/1‑93 (MQ=255)
                                                                        ttCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTGCAGCCGCGCATCGGCAATGGc                 >  1:3152452/1‑93 (MQ=255)
                                                                         tCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCg                <  2:3219114/93‑1 (MQ=255)
                                                                         tCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCg                >  1:2731172/1‑93 (MQ=255)
                                                                           cTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGt              >  2:4005606/1‑93 (MQ=255)
                                                                            tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTTACCAGTGATGCAAATCAGCGGGATGGAGGCCAGCCGCGCATCGGCAATGGCgggc             >  1:526612/1‑91 (MQ=255)
                                                                            tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTc             >  2:3390941/1‑93 (MQ=255)
                                                                             ggAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCCATGGCGGTcc            >  1:2848016/1‑92 (MQ=255)
                                                                             ggAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCa            >  2:5110331/1‑93 (MQ=255)
                                                                             ggAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCa            >  2:3273263/1‑93 (MQ=255)
                                                                               aaGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAcc          <  2:5018481/93‑1 (MQ=255)
                                                                               aaGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAcc          >  1:6253115/1‑93 (MQ=255)
                                                                                aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAACCGCGCATCCGCAATTGCGGTCACCa         >  2:5623919/1‑93 (MQ=255)
                                                                                 ggCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAg        >  2:404325/1‑93 (MQ=255)
                                                                                   cGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCTAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGt      >  2:4705985/1‑93 (MQ=255)
                                                                                    gTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGtt     <  2:930190/93‑1 (MQ=255)
                                                                                     tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa    >  2:6069164/1‑93 (MQ=255)
                                                                                     tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa    <  2:2339206/93‑1 (MQ=255)
                                                                                       ggTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGGGGTCACCAGGTTAGt  >  2:1501725/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT  >  NC_000913/3849968‑3850147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: