BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,860,862	T→C	A123A (GCA→GCG)	b4553 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,860,862	0	T	C	100.0%	799.7 / NA	248	A123A (GCA→GCG)	b4553	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/122); total (126/122)

Only 100 of 256 total aligned reads displayed.

CAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACT  >  NC_000913/3860772‑3860951

cAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGc                                                                                         <  1:2242994/93‑1 (MQ=255)

  gcgcCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGTTTTTAATCCCGCCCATCATTGTCAGCCCGCTACCCGCCa                                                                                       <  1:4784149/93‑1 (MQ=255)

  gcgcCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCa                                                                                       >  1:1744920/1‑93 (MQ=255)

  gcgcCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCa                                                                                       >  1:2378503/1‑93 (MQ=255)

  gcgcCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGGTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCa                                                                                       >  2:1199359/1‑93 (MQ=255)

     ccGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcg                                                                                    >  1:3086236/1‑93 (MQ=255)

       gTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgcg                                                                                  >  2:5731701/1‑93 (MQ=255)

        tCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGt                                                                                 >  1:2169388/1‑93 (MQ=255)

        tCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGCTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGt                                                                                 >  1:3517240/1‑93 (MQ=255)

        tCACAATGCCGCAAATGATAAGTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGt                                                                                 <  1:4128199/93‑1 (MQ=255)

         cacaATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTc                                                                                <  1:4613467/93‑1 (MQ=255)

           caATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCt                                                                              >  2:4769660/1‑93 (MQ=255)

           caATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCt                                                                              >  1:3487098/1‑93 (MQ=255)

            aaTGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTg                                                                             <  2:5963574/93‑1 (MQ=255)

               gCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGt                                                                          <  1:677019/93‑1 (MQ=255)

               gCCGCAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGt                                                                          <  1:2799702/93‑1 (MQ=255)

                ccGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTg                                                                         >  2:4655256/1‑93 (MQ=255)

                 cGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGa                                                                        >  1:1960813/1‑93 (MQ=255)

                  ggAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGaa                                                                       <  1:6357415/93‑1 (MQ=255)

                   gAAATGATAATTGCGCCGATAATGCTGGGATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCATCCTGAGTGaaa                                                                      >  1:4645000/1‑93 (MQ=255)

                     aaTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTCCCCGCCACCGCGTCCTGAGTGAAATc                                                                    >  2:4990838/1‑93 (MQ=255)

                      aTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTGCCCGCCACCGCGTCCTGAGTTAAATct                                                                   <  1:3254235/93‑2 (MQ=255)

                      aTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCg                                                                   >  2:6271225/1‑93 (MQ=255)

                      aTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCg                                                                   <  1:4424517/93‑1 (MQ=255)

                       tGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGa                                                                  <  1:1345494/93‑1 (MQ=255)

                        gATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAc                                                                 >  1:4943411/1‑93 (MQ=255)

                         aTAATTGCGCCGATAATGCTGGTATCGAGGGCTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACg                                                                >  2:5427503/1‑93 (MQ=255)

                          tAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGCAATCGACGc                                                               >  1:5165445/1‑93 (MQ=255)

                          tAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGc                                                               >  1:2060214/1‑93 (MQ=255)

                          tAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGc                                                               <  1:4251106/93‑1 (MQ=255)

                           aaTTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGcc                                                              <  1:3584838/93‑1 (MQ=255)

                           aaTTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGcc                                                              <  2:4037127/93‑1 (MQ=255)

                           aaTTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGcc                                                              >  2:6453246/1‑93 (MQ=255)

                           aaTTGCGCCGATAATGCTGGTATCGAGGGGTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGcg                                                              >  2:2303516/1‑92 (MQ=255)

                            aTTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCg                                                             >  1:546163/1‑93 (MQ=255)

                             ttGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATAGACGcaca                                                            >  1:1136037/1‑90 (MQ=255)

                               gcgcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAg                                                          >  2:4170239/1‑93 (MQ=255)

                               gcgcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAg                                                          <  1:6406784/93‑1 (MQ=255)

                                 gcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTa                                                        <  2:1567735/93‑1 (MQ=255)

                                 gcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTa                                                        <  1:2589843/93‑1 (MQ=255)

                                  ccGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAg                                                       >  1:2452503/1‑93 (MQ=255)

                                  ccGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAg                                                       >  2:3856931/1‑93 (MQ=255)

                                   cGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGc                                                      >  2:364761/1‑93 (MQ=255)

                                   cGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGc                                                      <  2:1387351/93‑1 (MQ=255)

                                    gATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTGCCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCt                                                     <  2:4823865/93‑1 (MQ=255)

                                    gATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCt                                                     <  1:5113864/93‑1 (MQ=255)

                                    gATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCt                                                     >  2:5271325/1‑93 (MQ=255)

                                    gATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCt                                                     <  2:3699873/93‑1 (MQ=255)

                                      tAATGCTGGTATCTAGTGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCCCCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTc                                                   <  2:4401494/93‑1 (MQ=255)

                                       aaTGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcc                                                  >  2:2192697/1‑93 (MQ=255)

                                       aaTGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcc                                                  <  2:3291401/93‑1 (MQ=255)

                                        aTGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTccc                                                 <  1:4752934/93‑1 (MQ=255)

                                         tGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcccc                                                >  1:1569064/1‑93 (MQ=255)

                                         tGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcccc                                                <  1:4576292/93‑1 (MQ=255)

                                         tGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcccc                                                <  1:4923552/93‑1 (MQ=255)

                                           cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                              <  2:5350658/93‑1 (MQ=255)

                                           cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                              >  2:1999459/1‑93 (MQ=255)

                                            tGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAgg                                             >  1:2993042/1‑93 (MQ=255)

                                            tGGTAGCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCGGAGTGAAATCGACGCCGAAGTAGCTTCCCCAgg                                             <  2:1333990/93‑1 (MQ=255)

                                             ggTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGt                                            >  2:1103631/1‑93 (MQ=255)

                                             ggTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCC‑CCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTc                                           >  1:5257174/1‑93 (MQ=255)

                                              gTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTc                                           >  1:4305727/1‑93 (MQ=255)

                                                aTCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAt                                         >  1:667952/1‑93 (MQ=255)

                                                 tCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAtt                                        >  2:1487873/1‑93 (MQ=255)

                                                  cGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTc                                       >  2:2249676/1‑93 (MQ=255)

                                                     gggTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCa                                    >  2:1694673/1‑93 (MQ=255)

                                                       gTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCACAGGTCATTCCCATc                                  >  1:1299803/1‑93 (MQ=255)

                                                       gTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTACCCAGGTCATTCCCATc                                  >  1:4845609/1‑93 (MQ=255)

                                                        ttttAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATAGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATcg                                 >  1:971857/1‑93 (MQ=255)

                                                         tttAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATcgc                                >  2:2780409/1‑93 (MQ=255)

                                                           tAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGt                              <  2:2100538/93‑1 (MQ=255)

                                                            aaTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGtt                             <  2:1791987/93‑1 (MQ=255)

                                                            aaTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGtt                             <  1:5672725/93‑1 (MQ=255)

                                                            aaTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGtt                             >  1:5870076/1‑93 (MQ=255)

                                                             aTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtg                            <  2:6622822/93‑1 (MQ=255)

                                                             aTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtg                            >  2:3551877/1‑93 (MQ=255)

                                                              tCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtga                           <  2:3978811/93‑1 (MQ=255)

                                                              tCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtga                           >  1:5840013/1‑93 (MQ=255)

                                                               cccGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtgat                          <  2:3221371/93‑1 (MQ=255)

                                                               cccGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtgat                          <  2:6050744/93‑1 (MQ=255)

                                                                ctggCTATCATTCTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCTCGTtgatg                         <  1:6536998/91‑1 (MQ=255)

                                                                   gCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGaaa                      <  2:5807215/93‑1 (MQ=255)

                                                                    ccATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAt                     >  2:2467120/1‑93 (MQ=255)

                                                                    ccATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAt                     >  1:1014631/1‑93 (MQ=255)

                                                                     catcatTGTCAGACCGCTACCCGCCACCGCGTCCTGAGGGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAtg                    >  1:3390706/1‑92 (MQ=255)

                                                                        catTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGtt                 >  2:2635889/1‑93 (MQ=255)

                                                                         atTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTc                >  2:36026/1‑93 (MQ=255)

                                                                         atTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGATTCCCCAGGTCATTCCCATCGCGTTGATGAAGTAGTTc                >  2:3915818/1‑93 (MQ=255)

                                                                          ttGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTcc               <  1:5765301/93‑1 (MQ=255)

                                                                          ttGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTcc               <  1:1649652/93‑1 (MQ=255)

                                                                          ttGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTcc               <  1:5154948/93‑1 (MQ=255)

                                                                          ttGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTcc               <  2:4367531/93‑1 (MQ=255)

                                                                            gTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAg             <  2:2829425/93‑1 (MQ=255)

                                                                             tCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAgg            >  1:3766514/1‑93 (MQ=255)

                                                                             tCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAgg            >  1:2672435/1‑93 (MQ=255)

                                                                             tCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAgg            <  2:3062710/93‑1 (MQ=255)

                                                                              cAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGt           <  2:3007206/93‑1 (MQ=255)

                                                                               aGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTc          >  1:2580381/1‑93 (MQ=255)

                                                                               aGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTc          >  2:4519513/1‑93 (MQ=255)

                                                                                   cGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGa      <  1:3974466/93‑1 (MQ=255)

CAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACT  >  NC_000913/3860772‑3860951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`