BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	477,992	A→G	intergenic (‑145/+13)	ylaB ← / ← ylaC	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	477,992	0	A	G	100.0%	944.0 / NA	282	intergenic (‑145/+13)	ylaB/ylaC	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (138/144); total (138/144)

Only 100 of 290 total aligned reads displayed.

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

tggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGtgtg                                                                                         >  1:4994875/1‑93 (MQ=255)

 ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGgtgtgt                                                                                        <  1:275630/93‑1 (MQ=255)

  gagaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTa                                                                                       <  1:5127939/93‑1 (MQ=255)

   agaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTaa                                                                                      >  1:5237731/1‑93 (MQ=255)

   agaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTaa                                                                                      <  1:3756809/93‑1 (MQ=255)

    gaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAc                                                                                     >  2:654352/1‑93 (MQ=255)

    gaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAc                                                                                     >  2:2811521/1‑93 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   <  1:3073406/93‑1 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   <  2:5098242/93‑1 (MQ=255)

        aggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTa                                                                                 <  1:1910827/93‑1 (MQ=255)

        aggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTa                                                                                 >  2:3171475/1‑93 (MQ=255)

         ggaggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTaa                                                                                >  1:4043933/1‑93 (MQ=255)

            ggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACtt                                                                             >  2:5532605/1‑93 (MQ=255)

            ggTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACtt                                                                             >  2:4950259/1‑93 (MQ=255)

             gTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTa                                                                            >  1:5072416/1‑93 (MQ=255)

              tAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTaa                                                                           <  1:3486688/93‑1 (MQ=255)

              tAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTaa                                                                           <  2:2087890/93‑1 (MQ=255)

                gagCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGa                                                                         <  1:4394627/93‑1 (MQ=255)

                 agCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGAt                                                                        <  1:5970058/93‑1 (MQ=255)

                  gCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATg                                                                       <  2:2428719/93‑1 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTCAGATGtt                                                                     <  1:6608498/93‑1 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  1:6247049/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  2:294082/1‑93 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    >  2:3806020/1‑93 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    >  1:649852/1‑93 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    >  1:5189871/1‑93 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    <  2:397228/93‑1 (MQ=255)

                      gTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGa                                                                   <  2:4605466/93‑1 (MQ=255)

                       tATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGAt                                                                  >  2:3822261/1‑93 (MQ=255)

                        aTTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGAtt                                                                 >  2:3051149/1‑93 (MQ=255)

                        aTTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGAtt                                                                 <  2:1436696/93‑1 (MQ=255)

                             aTGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcg                                                            >  1:1445254/1‑93 (MQ=255)

                                aaGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcga                                                         <  2:5003223/93‑1 (MQ=255)

                                 aGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgag                                                        >  2:2028201/1‑93 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       <  1:2374902/93‑1 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       >  1:1603029/1‑93 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       >  2:881523/1‑93 (MQ=255)

                                  gTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc                                                       <  2:3571478/93‑1 (MQ=255)

                                   tGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcg                                                      <  2:4781072/93‑1 (MQ=255)

                                    gATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcga                                                     <  2:2253320/93‑1 (MQ=255)

                                    gATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcga                                                     >  2:66168/1‑93 (MQ=255)

                                     aTGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGcgagcgag                                                    <  2:5840156/93‑1 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   <  1:108067/93‑1 (MQ=255)

                                       gggTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAggg                                                  <  1:950155/93‑1 (MQ=255)

                                        ggTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGt                                                 <  1:5822422/93‑1 (MQ=255)

                                         gTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTa                                                <  2:1600266/93‑1 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              >  2:2180160/1‑93 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              >  2:674873/1‑93 (MQ=255)

                                            gAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaa                                             >  1:6681695/1‑93 (MQ=255)

                                              aaCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAat                                           >  1:4843665/1‑93 (MQ=255)

                                              aaCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAat                                           >  2:6690849/1‑93 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          <  2:6489627/93‑1 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          >  2:5452800/1‑93 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          >  1:1665168/1‑93 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          >  2:3307812/1‑93 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          <  1:1021463/93‑1 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        >  1:2902886/1‑93 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        <  1:852779/93‑1 (MQ=255)

                                                  aTCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCg                                       <  2:2569481/93‑1 (MQ=255)

                                                   tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGt                                      >  2:5249631/1‑93 (MQ=255)

                                                   tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGt                                      <  1:4244276/93‑1 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  1:2185525/1‑93 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  2:2703323/1‑93 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  2:439736/1‑93 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   >  1:2573116/1‑93 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   >  2:4647993/1‑93 (MQ=255)

                                                      tggTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAGCCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   <  1:3306381/91‑1 (MQ=255)

                                                       tGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaa                                  <  2:6163195/93‑1 (MQ=255)

                                                        gTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaaa                                 >  1:2600521/1‑93 (MQ=255)

                                                         tCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg                                >  1:2225801/1‑93 (MQ=255)

                                                         tCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg                                <  1:5704960/93‑1 (MQ=255)

                                                          cATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGa                               >  1:4639446/1‑93 (MQ=255)

                                                          cATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGa                               <  1:5399653/93‑1 (MQ=255)

                                                           aTTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGAc                              >  1:1212270/1‑93 (MQ=255)

                                                            tttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa                             <  2:3721616/93‑1 (MQ=255)

                                                            tttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa                             <  2:4053661/93‑1 (MQ=255)

                                                              tGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGt                           <  2:535773/93‑1 (MQ=255)

                                                               gACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGtt                          <  2:3110452/93‑1 (MQ=255)

                                                                aCCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTc                         >  2:3469582/1‑93 (MQ=255)

                                                                aCCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGGAAAAATATCGTAAAAAGACAGTTc                         >  2:1791635/1‑93 (MQ=255)

                                                                 ccAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCa                        >  2:416993/1‑93 (MQ=255)

                                                                 ccAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCa                        <  2:4319681/93‑1 (MQ=255)

                                                                   aGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGCGGGTAAGAATATAGTAAAAAGACAGCTCAcc                      >  1:6386062/1‑93 (MQ=255)

                                                                   aGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCAcc                      >  1:5362215/1‑93 (MQ=255)

                                                                    ggCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCt                     <  2:1253569/93‑1 (MQ=255)

                                                                     gcgcAGAGCTTTACGCCTGGTTTGTAACCCTAACTTAAGATGTTGATTCGGCGCTAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCtt                    <  1:2115714/93‑1 (MQ=255)

                                                                      cgcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt                   >  1:3977312/1‑93 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  <  2:1708794/93‑1 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  >  2:1502435/1‑93 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  1:4510344/93‑1 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGAGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  2:1212616/93‑1 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACg                >  2:5797503/1‑93 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACg                <  1:1367303/93‑1 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  1:581195/93‑1 (MQ=255)

                                                                             cTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACg            >  2:6024804/1‑93 (MQ=255)

                                                                                 aCGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCa        >  1:3703786/1‑93 (MQ=255)

                                                                                   gCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtt      <  1:4972871/93‑1 (MQ=255)

                                                                                   gCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtt      <  1:4159508/93‑1 (MQ=255)

                                                                                      tGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAttttt   >  1:5598004/1‑93 (MQ=255)

                                                                                       ggTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtttttt  <  1:1779318/93‑1 (MQ=255)

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`