BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,873,493	T→C	C124C (TGT→TGC)	yidX →	putative replicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,873,493	0	T	C	100.0%	1173.1 / NA	351	C124C (TGT→TGC)	yidX	putative replicase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (184/167); total (184/167)

Only 100 of 358 total aligned reads displayed.

GGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATT  >  NC_000913/3873404‑3873582

 gCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCa                                                                                       <  2:4070121/93‑1 (MQ=255)

  cacaATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAg                                                                                      <  2:3806973/93‑1 (MQ=255)

  cacaATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAg                                                                                      >  1:3002130/1‑93 (MQ=255)

       tatCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCAc                                                                                 <  2:2522975/93‑1 (MQ=255)

        atCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACt                                                                                >  1:4174756/1‑93 (MQ=255)

        atCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACt                                                                                >  2:5948388/1‑93 (MQ=255)

         tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               <  1:1480045/93‑1 (MQ=255)

         tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               <  1:6212826/93‑1 (MQ=255)

         tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               >  1:2118070/1‑93 (MQ=255)

         tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               >  2:5699926/1‑93 (MQ=255)

           gCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGa                                                                             <  2:2740879/93‑1 (MQ=255)

           gCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGa                                                                             >  1:5706257/1‑93 (MQ=255)

           gCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGa                                                                             >  2:3639886/1‑93 (MQ=255)

             tttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaa                                                                           >  2:1700934/1‑93 (MQ=255)

              ttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaaa                                                                          <  2:3092705/93‑1 (MQ=255)

              ttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaaa                                                                          <  1:6010928/93‑1 (MQ=255)

                actactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAAcc                                                                        <  2:3991006/93‑1 (MQ=255)

                  tactactGGAATAACGAAGAATAAAAGGCACTGGCAACGCCTTATGGTTTTGCCTGTGGAGTTCAACACTGCACCAGGTCACTGTAAAACCTa                                                                      >  1:4640138/1‑93 (MQ=255)

                  tactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTa                                                                      >  2:2864138/1‑93 (MQ=255)

                  tactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTa                                                                      >  2:4182805/1‑93 (MQ=255)

                   actactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaa                                                                     <  2:838324/93‑1 (MQ=255)

                    ctactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaa                                                                    >  1:5086418/1‑93 (MQ=255)

                     tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  1:1576344/1‑93 (MQ=255)

                     tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:6262914/1‑93 (MQ=255)

                     tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   <  1:1963627/93‑1 (MQ=255)

                     tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  1:5494150/1‑93 (MQ=255)

                     tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:3907839/1‑93 (MQ=255)

                      actGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAg                                                                  <  1:1233497/93‑1 (MQ=255)

                         ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               <  2:453910/93‑1 (MQ=255)

                         ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               >  1:2615554/1‑93 (MQ=255)

                         ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               <  2:5554239/93‑1 (MQ=255)

                           aaTAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGcaca                                                             >  2:6178548/1‑93 (MQ=255)

                            aTAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACaa                                                            >  2:1891059/1‑93 (MQ=255)

                             tAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAAt                                                           >  1:5200035/1‑93 (MQ=255)

                             tAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAAt                                                           >  2:320499/1‑93 (MQ=255)

                             tAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAAt                                                           >  1:6269429/1‑93 (MQ=255)

                             tAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAAt                                                           >  1:4383105/1‑93 (MQ=255)

                             tAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAAt                                                           >  2:1150633/1‑93 (MQ=255)

                               aCGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGTAAAACCTAAAAGGCACAATcc                                                         >  2:6679250/1‑93 (MQ=255)

                               aCGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATcc                                                         <  2:5239019/93‑1 (MQ=255)

                               aCGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATcc                                                         >  2:5061737/1‑93 (MQ=255)

                               aCGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATcc                                                         <  2:1799307/93‑1 (MQ=255)

                                 gaagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCAt                                                       <  1:2437838/93‑1 (MQ=255)

                                 gaagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCAt                                                       <  1:3272019/93‑1 (MQ=255)

                                  aagaggaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      >  2:4898108/1‑93 (MQ=255)

                                  aagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      >  2:4262205/1‑93 (MQ=255)

                                  aagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      <  2:1963268/93‑1 (MQ=255)

                                  aagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      >  2:1067353/1‑93 (MQ=255)

                                   agaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATga                                                     >  1:1102336/1‑93 (MQ=255)

                                   agaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATga                                                     >  1:3951254/1‑93 (MQ=255)

                                   agaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATga                                                     <  2:4075124/93‑1 (MQ=255)

                                    gaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATgag                                                    >  1:919167/1‑93 (MQ=255)

                                      agaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGaa                                                  <  2:6729644/93‑1 (MQ=255)

                                           aGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATa                                             >  1:5044319/1‑93 (MQ=255)

                                             gCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaa                                           <  2:2425335/93‑1 (MQ=255)

                                              cACTGGCAACTCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaaa                                          <  1:4799327/93‑1 (MQ=255)

                                                 tGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACa                                       <  1:5331556/93‑1 (MQ=255)

                                                 tGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACa                                       >  2:2341748/1‑93 (MQ=255)

                                                  ggCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACAt                                      <  2:2390103/93‑1 (MQ=255)

                                                  ggCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACAt                                      <  2:4386022/93‑1 (MQ=255)

                                                   gCAACTCATTATGGTTTTGCCTTTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     <  1:368555/93‑1 (MQ=255)

                                                   gCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     <  2:1371328/93‑1 (MQ=255)

                                                   gCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     >  2:5455873/1‑93 (MQ=255)

                                                   gCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     <  2:5377444/93‑1 (MQ=255)

                                                     aaCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGa                                   >  2:4630873/1‑93 (MQ=255)

                                                     aaCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGa                                   <  2:2147379/93‑1 (MQ=255)

                                                     aaCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGa                                   >  1:4856979/1‑93 (MQ=255)

                                                      aCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGAt                                  >  2:5765851/1‑93 (MQ=255)

                                                      aCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGAt                                  <  1:1074204/93‑1 (MQ=255)

                                                        gCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTa                                <  2:4754414/93‑1 (MQ=255)

                                                        gCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTa                                <  2:6570214/93‑1 (MQ=255)

                                                        gCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTa                                >  2:6487287/1‑93 (MQ=255)

                                                           ttATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTc                             >  1:4587616/1‑93 (MQ=255)

                                                              tGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCaaa                          <  2:1423443/93‑1 (MQ=255)

                                                              tGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCaaa                          >  2:3708349/1‑93 (MQ=255)

                                                               ggTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAg                         >  2:5105395/1‑93 (MQ=255)

                                                                gTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAgg                        <  1:2822112/93‑1 (MQ=255)

                                                                 ttttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGt                       >  2:6089617/1‑93 (MQ=255)

                                                                 ttttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGt                       >  1:3505547/1‑93 (MQ=255)

                                                                 ttttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGt                       >  1:428376/1‑93 (MQ=255)

                                                                  tttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTg                      <  2:1552895/93‑1 (MQ=255)

                                                                    tGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGAt                    <  2:3418527/93‑1 (MQ=255)

                                                                    tGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGAt                    <  1:5128850/93‑1 (MQ=255)

                                                                    tGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGAt                    <  1:5905443/93‑1 (MQ=255)

                                                                     gCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATg                   >  1:5789451/1‑93 (MQ=255)

                                                                     gCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATg                   >  2:2975613/1‑93 (MQ=255)

                                                                         gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               <  1:646145/93‑1 (MQ=255)

                                                                         gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               >  2:631895/1‑93 (MQ=255)

                                                                           ggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTc             >  1:4450325/1‑93 (MQ=255)

                                                                              gtTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAc          >  1:3150307/1‑93 (MQ=255)

                                                                               ttCAACCCTGCACCAGGTCCCTGGAAAACCTAAAAGGTACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAcc         <  1:2772529/93‑1 (MQ=255)

                                                                               ttCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAcc         >  2:3509807/1‑93 (MQ=255)

                                                                                  aaCACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatc      >  2:2570065/1‑93 (MQ=255)

                                                                                   acacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcc     >  1:4916804/1‑93 (MQ=255)

                                                                                   acacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcc     >  2:762624/1‑93 (MQ=255)

                                                                                   acacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcc     >  2:601947/1‑93 (MQ=255)

                                                                                    cacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcca    <  1:1777546/93‑1 (MQ=255)

                                                                                    cacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcca    <  2:3831987/93‑1 (MQ=255)

                                                                                     acTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatccat   >  1:1655853/1‑93 (MQ=255)

                                                                                     acTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatccat   <  2:2764724/93‑1 (MQ=255)

GGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATT  >  NC_000913/3873404‑3873582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`