BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,874,579	A→G	M1T (ATG→ACG) †	yidA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,874,579	0	A	G	100.0%	796.1 / NA	241	M1T (ATG→ACG) †	yidA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/127); total (114/127)

Only 100 of 244 total aligned reads displayed.

CGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGC  >  NC_000913/3874490‑3874667

    aaTCGCATTTTTAACGGCGAGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTc                                                                                   >  1:6464042/1‑93 (MQ=255)

         gaTTTGTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAg                                                                              <  1:2986617/92‑1 (MQ=255)

         cATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAg                                                                              <  2:272963/93‑1 (MQ=255)

              ttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGa                                                                         <  2:1719668/93‑1 (MQ=255)

               tAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCTTCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAt                                                                        <  2:3813827/93‑1 (MQ=255)

                aaCGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAtt                                                                       <  2:3346286/93‑1 (MQ=255)

                 aCGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTg                                                                      <  1:3950415/93‑1 (MQ=255)

                    gcggGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGtt                                                                   >  1:3800074/1‑93 (MQ=255)

                    gcggGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGtt                                                                   <  2:6220127/93‑1 (MQ=255)

                        gTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTg                                                               <  1:2436992/93‑1 (MQ=255)

                        gTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTg                                                               <  1:4951394/93‑1 (MQ=255)

                         tGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGa                                                              >  2:820903/1‑93 (MQ=255)

                            aaTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAccc                                                           >  1:6593161/1‑93 (MQ=255)

                            aaTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAccc                                                           <  2:6117861/93‑1 (MQ=255)

                            aaTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAccc                                                           <  2:2821791/93‑1 (MQ=255)

                             aTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCa                                                          <  2:2896670/93‑1 (MQ=255)

                              tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                         >  2:4228027/1‑93 (MQ=255)

                              tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                         <  2:5521899/93‑1 (MQ=255)

                              tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                         >  2:2998411/1‑93 (MQ=255)

                               ggTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATg                                                        <  2:6497168/93‑1 (MQ=255)

                                gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                       >  2:5529326/1‑93 (MQ=255)

                                 tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                      <  1:5279919/93‑1 (MQ=255)

                                 tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                      >  2:2968939/1‑93 (MQ=255)

                                 tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                      <  2:3243127/93‑1 (MQ=255)

                                   tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  2:2517314/93‑1 (MQ=255)

                                   tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  2:1837910/93‑1 (MQ=255)

                                   tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                    <  1:2906888/93‑1 (MQ=255)

                                    gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   >  2:2086930/1‑93 (MQ=255)

                                    gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   >  1:4461804/1‑93 (MQ=255)

                                    gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   <  1:4647162/93‑1 (MQ=255)

                                    gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   <  2:389153/93‑1 (MQ=255)

                                    gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                   >  2:442439/1‑93 (MQ=255)

                                      tCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgc                                                 <  1:3358125/93‑1 (MQ=255)

                                        gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGa                                               >  2:1647902/1‑93 (MQ=255)

                                        gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGa                                               >  1:1622747/1‑93 (MQ=255)

                                         ggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt                                              <  2:1110014/93‑1 (MQ=255)

                                         ggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt                                              <  1:5864725/93‑1 (MQ=255)

                                         ggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt                                              >  1:4347601/1‑93 (MQ=255)

                                          gcagcaGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAtt                                             <  1:6297393/93‑1 (MQ=255)

                                               agAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCt                                        <  1:4867748/93‑1 (MQ=255)

                                                gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGGCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       >  2:4817925/1‑93 (MQ=255)

                                                gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       <  1:2377375/93‑1 (MQ=255)

                                                gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       <  2:5796389/93‑1 (MQ=255)

                                                gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                       <  2:5998684/93‑1 (MQ=255)

                                                 aaGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCa                                      >  1:6641209/1‑93 (MQ=255)

                                                   gggTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaa                                    <  1:6672180/93‑1 (MQ=255)

                                                    ggTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaaa                                   >  1:1674542/1‑93 (MQ=255)

                                                       gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                <  2:2261132/93‑1 (MQ=255)

                                                        ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                               >  1:1295828/1‑93 (MQ=255)

                                                         catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              >  1:795813/1‑93 (MQ=255)

                                                         catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              >  2:4887640/1‑93 (MQ=255)

                                                         catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              >  1:2605089/1‑93 (MQ=255)

                                                         catccatATCGATAGCAATGAGATTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                              >  2:1751086/1‑93 (MQ=255)

                                                          atccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAga                             >  1:5953370/1‑92 (MQ=255)

                                                            ccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTac                           >  1:5591635/1‑93 (MQ=255)

                                                             catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                          <  2:2426439/93‑1 (MQ=255)

                                                             catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                          >  1:87342/1‑93 (MQ=255)

                                                              atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                         >  2:1390488/1‑93 (MQ=255)

                                                              atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                         >  1:1038464/1‑93 (MQ=255)

                                                              atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                         <  1:3156373/93‑1 (MQ=255)

                                                               tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                        >  2:1371801/1‑93 (MQ=255)

                                                                atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                       >  1:1035121/1‑93 (MQ=255)

                                                                 tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      <  2:5212262/93‑1 (MQ=255)

                                                                 tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      >  1:5228758/1‑93 (MQ=255)

                                                                 tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      >  2:1305924/1‑93 (MQ=255)

                                                                 tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGGTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                      >  1:2545866/1‑93 (MQ=255)

                                                                  cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc                     <  1:1147562/93‑1 (MQ=255)

                                                                   gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                    >  1:1824730/1‑93 (MQ=255)

                                                                   gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                    >  1:2254261/1‑93 (MQ=255)

                                                                   gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                    <  2:3512148/93‑1 (MQ=255)

                                                                    aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAACAATCAGACCAACACCCg                   >  1:2214781/1‑93 (MQ=255)

                                                                    aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCg                   >  2:5109016/1‑93 (MQ=255)

                                                                     tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  2:5866824/1‑93 (MQ=255)

                                                                     tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  >  1:5884225/1‑93 (MQ=255)

                                                                     tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                  <  1:755941/93‑1 (MQ=255)

                                                                      aGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAg                 <  2:1605736/93‑1 (MQ=255)

                                                                      aGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAg                 >  2:3612596/1‑93 (MQ=255)

                                                                        cAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAggg               <  2:4577790/93‑1 (MQ=255)

                                                                         aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa              <  2:793500/93‑1 (MQ=255)

                                                                         aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa              >  2:4718807/1‑93 (MQ=255)

                                                                         aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa              <  2:6298909/93‑1 (MQ=255)

                                                                         aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGCACAACACCCGAGGGa              >  1:2056451/1‑93 (MQ=255)

                                                                           tGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaa            >  1:3280669/1‑93 (MQ=255)

                                                                            gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa           >  1:5123994/1‑93 (MQ=255)

                                                                              gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         <  1:4796607/93‑1 (MQ=255)

                                                                              gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         <  2:6625035/93‑1 (MQ=255)

                                                                              gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         <  1:1361560/93‑1 (MQ=255)

                                                                              gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         <  2:1989605/93‑1 (MQ=255)

                                                                              gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg         >  1:1981962/1‑93 (MQ=255)

                                                                               tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg        <  2:1251452/93‑1 (MQ=255)

                                                                                ttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCAATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggg       <  1:4163257/93‑1 (MQ=255)

                                                                                 tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg      >  2:4849337/1‑93 (MQ=255)

                                                                                  aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa     >  1:829964/1‑93 (MQ=255)

                                                                                   aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGGAAAGGGGGag    >  2:5267173/1‑92 (MQ=255)

                                                                                   aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAt    >  2:223705/1‑93 (MQ=255)

                                                                                   aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAt    <  1:5347020/93‑1 (MQ=255)

                                                                                   aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAt    <  1:6120914/93‑1 (MQ=255)

                                                                                     aGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGc  >  2:6072888/1‑93 (MQ=255)

                                                                                     aGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGc  <  1:4183155/93‑1 (MQ=255)

                                                                                     aGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGc  >  1:3552774/1‑93 (MQ=255)

CGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGC  >  NC_000913/3874490‑3874667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`