BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,875,213	T→C	intergenic (‑120/+120)	b3698 ← / ← gyrB	hypothetical protein/DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,875,213	0	T	C	100.0%	871.4 / NA	269	intergenic (‑120/+120)	b3698/gyrB	hypothetical protein/DNA gyrase subunit B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (128/141); total (128/141)

Only 100 of 290 total aligned reads displayed.

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

aCCAAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGc                                                                                         <  1:2329399/93‑1 (MQ=255)

 cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGcc                                                                                        <  1:2666731/93‑1 (MQ=255)

 cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGcc                                                                                        >  1:2522860/1‑93 (MQ=255)

 cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGcc                                                                                        <  2:3750921/93‑1 (MQ=255)

  ccAAAAAGTATAGATTTGCGGGATGATAATTGCTGATTGAAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCg                                                                                       <  1:3283951/93‑1 (MQ=255)

  ccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCg                                                                                       <  1:4936194/93‑1 (MQ=255)

  ccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCg                                                                                       >  1:5005432/1‑93 (MQ=255)

   cAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCgg                                                                                      >  2:2584461/1‑93 (MQ=255)

   cAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCgg                                                                                      >  2:3365936/1‑93 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGa                                                                                     >  2:6012649/1‑93 (MQ=255)

     aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGAt                                                                                    >  1:1428679/1‑93 (MQ=255)

     aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGAt                                                                                    >  1:5895581/1‑93 (MQ=255)

         gTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATgcgg                                                                                >  1:2073320/1‑93 (MQ=255)

         gTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATgcgg                                                                                >  1:6483921/1‑93 (MQ=255)

          tataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATgcggc                                                                               >  2:3872501/1‑93 (MQ=255)

           ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATgcggcg                                                                              <  1:1344000/93‑1 (MQ=255)

            taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGGGATGATCTCCGCCCTTTTCTTATAACTTCTCCCCCGGAGgcggcg                                                                              >  1:5705688/1‑93 (MQ=255)

              gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGa                                                                           >  1:6415150/1‑93 (MQ=255)

               aTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGaa                                                                          <  1:2016494/93‑1 (MQ=255)

               aTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGaa                                                                          <  2:1544659/93‑1 (MQ=255)

                  tGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGc                                                                       <  2:4157778/93‑1 (MQ=255)

                  tGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGc                                                                       >  1:3308922/1‑93 (MQ=255)

                   gCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCCGATTTGGCGTGAACGcc                                                                      >  1:1927403/1‑93 (MQ=38)

                    ctgcatgatAATGGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCTCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCt                                                                     <  2:3643764/89‑1 (MQ=39)

                    cGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCt                                                                     <  2:5646323/93‑1 (MQ=255)

                    cGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCt                                                                     <  1:3858822/93‑1 (MQ=255)

                     gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCtt                                                                    <  1:2707715/93‑1 (MQ=255)

                      ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGGCGGATTCGGCGTGAACGCCCTa                                                                   >  2:4893068/1‑93 (MQ=38)

                      ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGGACGccctt                                                                   >  2:6476709/1‑90 (MQ=255)

                      ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTa                                                                   <  2:2327925/93‑1 (MQ=255)

                      ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTa                                                                   <  1:4483475/93‑1 (MQ=255)

                       gatgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTAt                                                                  >  1:4300675/1‑93 (MQ=255)

                        atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATc                                                                 <  2:5096742/93‑1 (MQ=255)

                         tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATcc                                                                <  2:6261792/93‑1 (MQ=255)

                          gatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCg                                                               <  2:840660/93‑1 (MQ=255)

                           atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCgg                                                              >  2:2145240/1‑93 (MQ=255)

                              aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACCCCTTATCCCGCCt                                                           >  1:1634366/1‑93 (MQ=255)

                               ttGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                          >  2:6612921/1‑93 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaa                                                      <  2:1774566/93‑1 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaa                                                      >  2:1019588/1‑93 (MQ=255)

                                    gATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa                                                     <  1:6578290/93‑1 (MQ=255)

                                     aTTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAt                                                    >  1:1097987/1‑93 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTATAAAATCAt                                                 <  1:4389756/93‑1 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt                                                 <  1:6082685/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGGCGGATGGGGCGTGGAAGACTTATTCCGCCTACCAAATCATGa                                               >  1:4019759/1‑93 (MQ=255)

                                           gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaa                                              <  1:6203778/93‑1 (MQ=255)

                                             aaTAAAAAGGGCGGAGATGCTCCCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaaaa                                            <  2:3539496/93‑1 (MQ=255)

                                              aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAt                                           <  1:3127400/93‑1 (MQ=255)

                                               tAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACAAAATCATGAAAAtt                                          >  2:2781900/1‑93 (MQ=255)

                                                 aaaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCa                                        >  2:4528356/1‑93 (MQ=255)

                                                 aaaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGACGGATGCGGCGAGCACCCCCTATTTTGCCTACAAAATCAAAAAAATTCa                                        >  1:2844197/1‑93 (MQ=21)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCaa                                       <  2:2454783/93‑1 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCaa                                       <  1:2205231/93‑1 (MQ=255)

                                                   aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAAt                                      <  1:2995351/93‑1 (MQ=255)

                                                   aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAAAATCATGAAAATTCaaa                                      >  1:4127509/1‑92 (MQ=255)

                                                    aGGGCGGAGATGAGCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATa                                     <  1:5214894/93‑1 (MQ=255)

                                                      ggCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTTCAAAATCATGAAAATTCAATACa                                   <  1:1592590/93‑1 (MQ=255)

                                                       gCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAt                                  <  1:2423843/93‑1 (MQ=255)

                                                         ggAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTg                                <  1:745936/93‑1 (MQ=255)

                                                         ggAGAGGATCTCCCCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTg                                <  1:3450790/93‑1 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCT‑CGGCGGGTGCGGCGTGGAAGCCCTATCCCGGCTCGAAAAACAATAAAATTTAATACATTGc                               >  1:445180/1‑93 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGc                               <  2:1272714/93‑1 (MQ=255)

                                                            gatgatCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCACTATCCGGCCTACAAAATCATGAAAATTTAATACACTGCaa                             >  1:6657989/1‑93 (MQ=25)

                                                             atgatCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAg                            <  1:2091458/93‑1 (MQ=255)

                                                                atCTCCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtt                         <  2:4933267/93‑1 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGGACGCCTTATCCGGCCTTCACAATCATGAAAATTTAATAAAATGCAAGAttt                        >  1:1982946/1‑93 (MQ=21)

                                                                 tctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        <  1:3748656/93‑1 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        >  1:1001498/1‑93 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        >  1:5075465/1‑93 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        <  2:730051/93‑1 (MQ=255)

                                                                  ctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTTCAAGAtttt                       >  1:3972493/1‑93 (MQ=255)

                                                                  ctcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtttt                       <  2:5212136/93‑1 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      <  2:1950576/93‑1 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      <  2:928999/93‑1 (MQ=255)

                                                                     cGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTTGt                    >  2:6073634/1‑93 (MQ=255)

                                                                     cGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGt                    <  2:5790798/93‑1 (MQ=255)

                                                                     cGCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGt                    <  2:5892261/93‑1 (MQ=255)

                                                                      gCCGTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa                   <  2:1818789/93‑1 (MQ=255)

                                                                      gCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGGACGCCCTATTCCGCCTACAAAAACATTAAAAATCAATACATTGCAAGATTTTTGTa                   >  2:4833082/1‑93 (MQ=21)

                                                                      gCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa                   >  1:4412704/1‑93 (MQ=255)

                                                                      gCCCTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa                   <  2:4093246/93‑1 (MQ=255)

                                                                       cccTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAg                  <  2:208429/93‑1 (MQ=255)

                                                                       cccTTTTCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAAAATCATGAAAAATCAATACATTGAAAGATTTTCGTAg                  >  2:2855628/1‑93 (MQ=21)

                                                                           tttCTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCt              <  1:5761853/93‑1 (MQ=255)

                                                                             tCTTATAGCTTCT‑CGCCGGATGCGGCGGGGACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGa            >  2:5292363/1‑93 (MQ=255)

                                                                              cTTATAGCTTCT‑CGCCGGATGCGGCGTGGACGCCTTTTCCCGCCTACAAAATCATGAAAAATTAATACATTTCAAGATTTTTGTAGGGCttgt           >  2:5985813/1‑90 (MQ=21)

                                                                              cTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt           <  2:4363805/93‑1 (MQ=255)

                                                                              cTTATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt           <  1:4793206/93‑1 (MQ=255)

                                                                               ttATAGCTTCT‑CGCCGGCTGCGGCGTGAACGCCTTTTTCCGCCTCCAAAATCATGAAAAATCAATACATTTCCAGATTTTTGTAGGCCTGATa          >  2:1342710/1‑93 (MQ=18)

                                                                               ttATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          <  1:6327310/93‑1 (MQ=255)

                                                                               ttATAGCTTCT‑CGCCGGATGCGGCGTGAACGCCCTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          >  2:4316126/1‑93 (MQ=255)

                                                                                tataGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTTGTAGGCCTGATaa         >  1:5350297/1‑93 (MQ=255)

                                                                                  taGCTTCT‑CGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       <  2:3942245/93‑1 (MQ=255)

                                                                                    gCTTCT‑CGCCGGGTGCGGCGTGGACGCCTTATCCCGCCTACAAAATCATGAAAATTCAATACATTGCCAGAATTTTGTAGGCCTGATAAGCGt     >  2:1484558/1‑93 (MQ=17)

                                                                                     cttct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa    <  1:693130/93‑1 (MQ=255)

                                                                                     cttct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa    >  2:4392254/1‑93 (MQ=255)

                                                                                     cttct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa    <  1:1012049/93‑1 (MQ=255)

                                                                                       tct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgt  >  1:801759/1‑92 (MQ=255)

                                                                                       tct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgc  <  2:2980118/93‑1 (MQ=255)

                                                                                       tct‑cGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgc  <  2:2002897/93‑1 (MQ=255)

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCT‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`