BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,902,432	G→A	P265L (CCG→CTG)	bglF ←	PTS system beta‑glucosides‑specific enzyme IIABC component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,902,432	0	G	A	100.0%	809.4 / NA	216	P265L (CCG→CTG)	bglF	PTS system beta‑glucosides‑specific enzyme IIABC component
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (119/97); total (119/97)

Only 100 of 221 total aligned reads displayed.

CGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCA  >  NC_000913/3902343‑3902521

cgccCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGcc                                                                                        <  2:3440735/93‑1 (MQ=255)

  cccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGcccc                                                                                      >  1:1694799/1‑93 (MQ=255)

   ccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCcca                                                                                     >  2:5896599/1‑93 (MQ=255)

   ccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCcca                                                                                     >  1:5841836/1‑93 (MQ=255)

   ccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCcca                                                                                     >  1:2764878/1‑93 (MQ=255)

   ccATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCcca                                                                                     >  2:1094952/1‑93 (MQ=255)

    cATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccac                                                                                    >  1:2625421/1‑93 (MQ=255)

     aTTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccacc                                                                                   >  1:871471/1‑93 (MQ=255)

     aTTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccaca                                                                                   >  1:3868340/1‑92 (MQ=255)

      ttACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCccacca                                                                                  <  2:5503060/93‑1 (MQ=255)

        aCCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagc                                                                                >  2:2666704/1‑93 (MQ=255)

         ccGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagca                                                                               >  1:6168146/1‑93 (MQ=255)

         ccGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACcagca                                                                               <  2:2174411/93‑1 (MQ=255)

             gcCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGaaa                                                                           <  2:4603675/93‑1 (MQ=255)

              cccGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAg                                                                          <  2:4437956/93‑1 (MQ=255)

               ccGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAgg                                                                         <  2:2281023/93‑1 (MQ=255)

                   aaaTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGAc                                                                     >  2:1662315/1‑93 (MQ=255)

                    aaTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACg                                                                    <  2:3807906/93‑1 (MQ=255)

                    aaTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACg                                                                    >  1:1864296/1‑93 (MQ=255)

                    aaTGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACg                                                                    <  2:4936277/93‑1 (MQ=255)

                      tGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACggg                                                                  <  1:5707641/93‑1 (MQ=255)

                       gCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgt                                                                 <  2:6438071/93‑1 (MQ=255)

                        cAGGAACCGCCTGATAAAGCCAGATATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGgtg                                                                <  1:668594/93‑1 (MQ=255)

                        cAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCCCCAGCAGAAAGGTGACGGgtg                                                                <  1:6410203/93‑1 (MQ=255)

                          ggAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGtgtg                                                              >  2:851716/1‑93 (MQ=255)

                           gAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGa                                                             <  2:3019250/93‑1 (MQ=255)

                            aaCCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGAt                                                            <  2:1429701/93‑1 (MQ=255)

                              ccGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATaa                                                          <  2:5565492/93‑1 (MQ=255)

                              ccGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATaa                                                          <  2:6426500/93‑1 (MQ=255)

                                gCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAAcc                                                        <  2:2523728/93‑1 (MQ=255)

                                 ccTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGGTGATAGCAGCCGCACCAGCAGAAAGGTGACGGGTGTGATAACCa                                                       >  2:3262427/1‑93 (MQ=255)

                                  cTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCAt                                                      >  2:385468/1‑93 (MQ=255)

                                  cTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGGGTGATAACCAt                                                      >  2:6537369/1‑93 (MQ=255)

                                   tGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc                                                     <  2:6147884/93‑1 (MQ=255)

                                   tGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATc                                                     <  2:2075674/93‑1 (MQ=255)

                                    gATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa                                                    >  1:2306354/1‑93 (MQ=255)

                                    gATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCa                                                    >  1:804968/1‑93 (MQ=255)

                                      tAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGa                                                  >  2:1213669/1‑93 (MQ=255)

                                       aaaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAc                                                 >  1:3559093/1‑93 (MQ=255)

                                        aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                <  1:3723772/93‑1 (MQ=255)

                                        aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                >  2:6591167/1‑93 (MQ=255)

                                        aaGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACa                                                >  2:6727870/1‑93 (MQ=255)

                                         aGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACAt                                               >  1:4625751/1‑93 (MQ=255)

                                          gCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATa                                              >  2:4655488/1‑93 (MQ=255)

                                          gCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATa                                              >  1:980805/1‑93 (MQ=255)

                                          gCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATa                                              >  1:2364047/1‑93 (MQ=255)

                                           ccAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAg                                             >  1:6307878/1‑93 (MQ=255)

                                             agagATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCa                                           >  1:5050574/1‑93 (MQ=255)

                                             agagATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCa                                           >  2:6012304/1‑93 (MQ=255)

                                              gagaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCaa                                          <  1:4465736/93‑1 (MQ=255)

                                                gaTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATg                                        >  2:584481/1‑93 (MQ=255)

                                                 aTAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATgg                                       >  1:4887383/1‑93 (MQ=255)

                                                  tAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgt                                      <  2:1999702/93‑1 (MQ=255)

                                                  tAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgt                                      <  1:1803031/93‑1 (MQ=255)

                                                  tAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgt                                      >  1:5973191/1‑93 (MQ=255)

                                                  tAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgt                                      <  1:1112746/93‑1 (MQ=255)

                                                   aaCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtg                                     >  1:5782599/1‑93 (MQ=255)

                                                   aaCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtg                                     >  2:5109896/1‑93 (MQ=255)

                                                   aaCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAAACATCAGACATAGCAATGgtg                                     >  2:132041/1‑93 (MQ=255)

                                                    aCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtgt                                    <  1:1570150/93‑1 (MQ=255)

                                                    aCCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGgtgt                                    <  1:1014441/93‑1 (MQ=255)

                                                     ccGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGtgtg                                   >  1:6608161/1‑93 (MQ=255)

                                                       ggcggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaa                                 <  1:2905736/93‑1 (MQ=255)

                                                       ggcggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaa                                 >  1:1137802/1‑93 (MQ=255)

                                                          ggcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTgaagaa                              >  1:2346148/1‑93 (MQ=255)

                                                           gcAATCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGaaa                             >  1:4582757/1‑93 (MQ=255)

                                                             aaTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtt                           >  2:1792020/1‑93 (MQ=255)

                                                             aaTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtt                           <  1:2255166/93‑1 (MQ=255)

                                                             aaTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGAAATAGCAATGGTGTGAAGAAAtt                           <  1:5212826/93‑1 (MQ=255)

                                                              aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          >  1:4694809/1‑93 (MQ=255)

                                                              aTCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          <  1:5373640/93‑1 (MQ=255)

                                                              aTCAGTTCGCTTATCCAGGCTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttt                          >  1:4152125/1‑93 (MQ=255)

                                                               tCAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAtttt                         >  1:486881/1‑93 (MQ=255)

                                                                cAGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAAttttt                        >  1:6639043/1‑93 (MQ=255)

                                                                 aGTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTg                       >  1:267461/1‑93 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      <  2:6240077/93‑1 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      <  2:4546506/93‑1 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      >  2:45209/1‑93 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      >  1:4511983/1‑93 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      >  1:2237314/1‑93 (MQ=255)

                                                                  gTTCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      >  2:1018128/1‑93 (MQ=255)

                                                                  gTTCGCTTAGCCAGGTTGATAGCAGCCCCACGAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGa                      <  2:6273562/93‑1 (MQ=255)

                                                                    tCGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGAtt                    <  2:5207392/93‑1 (MQ=255)

                                                                     cGCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTg                   <  1:4311117/93‑1 (MQ=255)

                                                                      gCTTATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGc                  >  1:1336687/1‑93 (MQ=255)

                                                                      gCTTATCCAGGTGGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGc                  >  2:3590549/1‑93 (MQ=255)

                                                                        ttATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCg                >  2:1969620/1‑93 (MQ=255)

                                                                        ttATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCg                >  2:3936679/1‑93 (MQ=255)

                                                                         tATCCAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGa               >  2:5694752/1‑93 (MQ=255)

                                                                            ccAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACgg            <  1:3434963/93‑1 (MQ=255)

                                                                             cAGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGGGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGt           >  1:5651616/1‑93 (MQ=255)

                                                                              aGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTa          <  1:4044856/93‑1 (MQ=255)

                                                                              aGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTa          >  1:3505702/1‑93 (MQ=255)

                                                                              aGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTa          <  1:1411175/93‑1 (MQ=255)

                                                                              aGGTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTa          <  2:4369320/93‑1 (MQ=255)

                                                                               ggTTGATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTaa         >  1:2027757/1‑93 (MQ=255)

                                                                                   gATAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCAc     >  1:29476/1‑93 (MQ=255)

                                                                                    aTAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACg    >  1:3965485/1‑93 (MQ=255)

                                                                                     tAGCAGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGc   >  1:6029022/1‑93 (MQ=255)

                                                                                      agcagcCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCa  <  2:4323813/93‑1 (MQ=255)

CGCCCATTACCGCGCCCGCAAATGCAGGAACCGCCTGATAAAGCCAGAGATAACCGGCGGCAATCAGTTCGCTTATCCAGGTTGATAGCGGCCCCACCAGCAGAAAGGTGACGGGTGTGATAACCATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCA  >  NC_000913/3902343‑3902521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`