BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,923,857	T→C	Q76R (CAG→CGG)	mioC ←	MioC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,923,857	0	T	C	100.0%	1063.2 / NA	320	Q76R (CAG→CGG)	mioC	MioC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (174/146); total (174/146)

Only 100 of 322 total aligned reads displayed.

TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG  >  NC_000913/3923767‑3923946

tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                         >  1:4182844/1‑93 (MQ=255)

tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                         >  1:2520431/1‑93 (MQ=255)

 cGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGtt                                                                                        >  1:838181/1‑93 (MQ=255)

  gAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTc                                                                                       >  1:5072822/1‑93 (MQ=255)

   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                      <  1:4965724/93‑1 (MQ=255)

   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                      >  2:5088614/1‑93 (MQ=255)

     tttATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTg                                                                                    >  1:3469485/1‑93 (MQ=255)

        aTCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCaa                                                                                 <  2:3550024/93‑1 (MQ=255)

         tCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAt                                                                                <  2:4125427/93‑1 (MQ=255)

          cGATAGCCCTACAAAAGGTGTGATAATCACGACTGACAATACCGATTGCGCCAGAGGGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATg                                                                               <  1:2373987/93‑1 (MQ=255)

          cGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATg                                                                               <  1:2150689/93‑1 (MQ=255)

          cGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATg                                                                               >  1:5896664/1‑93 (MQ=255)

            aTAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCt                                                                             <  2:4872723/93‑1 (MQ=255)

              aGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTc                                                                           >  2:1106893/1‑93 (MQ=255)

               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                          >  2:1328726/1‑93 (MQ=255)

               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                          >  2:3132775/1‑93 (MQ=255)

                ccccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAt                                                                         >  2:3973300/1‑93 (MQ=255)

                 cccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATa                                                                        >  2:3388171/1‑93 (MQ=255)

                 cccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATa                                                                        >  2:2297625/1‑93 (MQ=255)

                  ccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATag                                                                       <  1:5831941/93‑1 (MQ=255)

                  ccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATag                                                                       >  2:6211580/1‑93 (MQ=255)

                   cacaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATaga                                                                      <  2:582950/93‑1 (MQ=255)

                    acaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaa                                                                     >  1:533596/1‑93 (MQ=255)

                    acaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaa                                                                     >  1:3577150/1‑93 (MQ=255)

                     caAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaa                                                                    <  2:1543611/93‑1 (MQ=255)

                     caAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaa                                                                    >  1:2274058/1‑93 (MQ=255)

                      aaaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaag                                                                   <  2:1921545/93‑1 (MQ=255)

                      aaaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaag                                                                   >  2:402373/1‑93 (MQ=255)

                       aaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAACGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagg                                                                  >  1:2766754/1‑93 (MQ=255)

                       aaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagg                                                                  >  1:1031957/1‑93 (MQ=255)

                        aaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagga                                                                 <  1:4631449/93‑1 (MQ=255)

                         aGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggag                                                                >  2:2140121/1‑93 (MQ=255)

                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               >  2:5721382/1‑93 (MQ=255)

                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               <  1:1505661/93‑1 (MQ=255)

                          ggTGTCATAGTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               <  2:1991850/93‑1 (MQ=255)

                            tgtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaa                                                             <  1:6214869/93‑1 (MQ=255)

                               cATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGt                                                          <  2:2547621/93‑1 (MQ=255)

                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  1:5978073/1‑93 (MQ=255)

                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  1:1152976/1‑93 (MQ=255)

                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  1:456829/1‑93 (MQ=255)

                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  1:2133044/1‑93 (MQ=255)

                                  atTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGt                                                       <  2:2652847/93‑1 (MQ=255)

                                   ttCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTc                                                      <  2:5167039/93‑1 (MQ=255)

                                   ttCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTc                                                      <  1:2570448/93‑1 (MQ=255)

                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                     <  2:6719079/93‑1 (MQ=255)

                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                     >  2:6474000/1‑93 (MQ=255)

                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                     <  2:102185/93‑1 (MQ=255)

                                     cACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGATTCCGTTCCTGCAATGCTTCATAGAAACGAGAAAGGTTGTCCg                                                    >  2:5127072/1‑93 (MQ=255)

                                        gACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGaa                                                 <  2:2365044/93‑1 (MQ=255)

                                          cTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAata                                               <  1:1565431/93‑1 (MQ=255)

                                           tGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatat                                              >  1:2615287/1‑93 (MQ=255)

                                           tGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatat                                              <  2:2728142/93‑1 (MQ=255)

                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                             <  1:1684603/93‑1 (MQ=255)

                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                             <  2:5592753/93‑1 (MQ=255)

                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                           >  1:5652123/1‑93 (MQ=255)

                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                           >  1:4251695/1‑93 (MQ=255)

                                                aTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCg                                         >  1:1268489/1‑93 (MQ=255)

                                                   ccGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCa                                      >  1:4897135/1‑93 (MQ=255)

                                                   ccGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCa                                      >  2:431343/1‑93 (MQ=255)

                                                    cGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAc                                     >  2:3157154/1‑93 (MQ=255)

                                                    cGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAc                                     <  2:2934806/93‑1 (MQ=255)

                                                      aTTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCg                                   >  1:1650396/1‑93 (MQ=255)

                                                       ttGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgt                                  <  1:6450331/93‑1 (MQ=255)

                                                       ttGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgt                                  <  2:4608456/93‑1 (MQ=255)

                                                         gcgcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgg                                <  1:6706036/93‑1 (MQ=255)

                                                          cgcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtggg                               <  1:1959470/93‑1 (MQ=255)

                                                           gcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAACGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                              >  2:4705673/1‑93 (MQ=255)

                                                             cAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggtgg                            >  2:1485112/1‑93 (MQ=255)

                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           <  1:1366907/93‑1 (MQ=255)

                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           >  2:5386701/1‑93 (MQ=255)

                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           >  2:6130113/1‑93 (MQ=255)

                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           >  2:3286223/1‑93 (MQ=255)

                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                          >  1:3740701/1‑93 (MQ=255)

                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                          >  2:5935221/1‑93 (MQ=255)

                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                          >  1:6347951/1‑93 (MQ=255)

                                                                aGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGc                         >  2:5334227/1‑93 (MQ=255)

                                                                 gCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCt                        >  2:1242105/1‑93 (MQ=255)

                                                                 gCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGGGGGTGGAGCt                        >  2:5434893/1‑93 (MQ=255)

                                                                   ggACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGa                      <  2:5245673/93‑1 (MQ=255)

                                                                    gACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                     >  2:6305735/1‑93 (MQ=255)

                                                                    gACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                     >  1:3516785/1‑93 (MQ=255)

                                                                    gACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                     >  2:3806684/1‑93 (MQ=255)

                                                                    gACGGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                     <  1:1746405/93‑1 (MQ=255)

                                                                       tGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAc                  >  2:4468494/1‑93 (MQ=255)

                                                                       tGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAc                  <  1:3166224/93‑1 (MQ=255)

                                                                        gCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAcc                 <  1:4026956/93‑1 (MQ=255)

                                                                          aGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccag               >  1:4465213/1‑93 (MQ=255)

                                                                           gAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagc              >  2:183156/1‑93 (MQ=255)

                                                                           gAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGT‑GGTGGAGCTGATAAccagcc             >  1:3303057/1‑93 (MQ=255)

                                                                             aaGATCGGGCTTCCGTTTCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTTCGGAATATCTCGGGCACCGTGGGTGGAGCTGATAAccagcca            >  1:2700058/1‑93 (MQ=255)

                                                                               gATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGa          >  1:5480007/1‑93 (MQ=255)

                                                                               gATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGa          >  2:4370797/1‑93 (MQ=255)

                                                                                   gggCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATccc      >  1:6552556/1‑93 (MQ=255)

                                                                                    ggCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCt     <  2:3898048/93‑1 (MQ=255)

                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    >  2:3685339/1‑93 (MQ=255)

                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    >  2:3325580/1‑93 (MQ=255)

                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    >  1:3653739/1‑93 (MQ=255)

                                                                                       ttCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAg  >  2:4075303/1‑93 (MQ=255)

                                                                                       ttCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAg  >  1:3002646/1‑93 (MQ=255)

                                                                                       ttCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAg  >  1:340706/1‑93 (MQ=255)

TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG  >  NC_000913/3923767‑3923946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`