Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,934,276 C→T H125Y (CAC→TAC)  rbsB → D‑ribose periplasmic binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,934,2760CT99.6% 969.4 / NA 260H125Y (CAC→TAC) rbsBD‑ribose periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (115/144);  minor base A (1/0);  total (116/144)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 272 total aligned reads displayed.

GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT  >  NC_000913/3934186‑3934364
                                                                                          |                                                                                        
 cAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtaca                                                                                       <  2:6241473/93‑1 (MQ=255)
  aGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAt                                                                                      <  2:4501631/93‑1 (MQ=255)
  aGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAt                                                                                      >  2:600644/1‑93 (MQ=255)
  aGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAt                                                                                      <  1:5153033/93‑1 (MQ=255)
   gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt                                                                                     >  2:3075692/1‑93 (MQ=255)
   gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt                                                                                     >  2:2670912/1‑93 (MQ=255)
   gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt                                                                                     >  2:2108077/1‑93 (MQ=255)
    tGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTg                                                                                    <  1:2999334/93‑1 (MQ=255)
     gggTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGc                                                                                   >  1:2921090/1‑93 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc                                                                                <  1:5033239/93‑1 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGATGAGCTACATTGCTTc                                                                                <  2:6181124/93‑1 (MQ=255)
          aTGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTg                                                                              >  2:6016446/1‑93 (MQ=255)
           tGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGa                                                                             <  2:4123988/93‑1 (MQ=255)
             cTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATa                                                                           <  1:313344/93‑1 (MQ=255)
              tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa                                                                          >  2:690897/1‑93 (MQ=255)
              tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa                                                                          <  1:6457266/93‑1 (MQ=255)
               gtgAAGATGTGTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAc                                                                         <  1:4264542/93‑1 (MQ=255)
               gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATAACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAc                                                                         <  1:2807386/93‑1 (MQ=255)
                 gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt                                                                       <  1:2299231/93‑1 (MQ=255)
                    gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACt                                                                    <  2:371905/93‑1 (MQ=255)
                     aTGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTg                                                                   <  2:139656/93‑1 (MQ=255)
                     aTGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTg                                                                   <  1:1257524/93‑1 (MQ=255)
                      tGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTgg                                                                  <  1:5853367/93‑1 (MQ=255)
                         cTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcg                                                               <  2:3780564/93‑1 (MQ=255)
                           aaCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcggc                                                             >  1:5046492/1‑93 (MQ=255)
                            aCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCa                                                            >  2:3385045/1‑93 (MQ=255)
                             ccAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaa                                                           <  1:4955095/93‑1 (MQ=255)
                              cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaa                                                          >  1:3420019/1‑93 (MQ=255)
                              cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGAGGCaaa                                                          >  2:3206739/1‑93 (MQ=255)
                               aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                         <  2:4776057/93‑1 (MQ=255)
                               aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                         <  2:4977125/93‑1 (MQ=255)
                               aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                         >  2:6633104/1‑93 (MQ=255)
                               aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                         >  1:4215604/1‑93 (MQ=255)
                                ggCGAACATCCTGGCTATCACTCTTGCGCGGCAGGCAACGAAAGGTGAAGCGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                        <  2:1552326/93‑1 (MQ=255)
                                ggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                        >  1:3806251/1‑93 (MQ=255)
                                ggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                        >  1:5848550/1‑93 (MQ=255)
                                 gCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATc                                                       <  2:3932415/93‑1 (MQ=255)
                                   gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGGAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     <  2:1995212/93‑1 (MQ=255)
                                   gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     >  1:2396541/1‑93 (MQ=255)
                                   gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     <  2:5190486/93‑1 (MQ=255)
                                   gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     <  1:1187158/93‑1 (MQ=255)
                                   gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     <  2:2788356/93‑1 (MQ=255)
                                   caaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc                                                     <  1:2100609/92‑1 (MQ=255)
                                    aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt                                                    >  2:922673/1‑93 (MQ=255)
                                     aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg                                                   >  1:2039926/1‑93 (MQ=255)
                                      cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg                                                  <  2:2986212/93‑1 (MQ=255)
                                      cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg                                                  <  1:834598/93‑1 (MQ=255)
                                      cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg                                                  <  2:2367475/93‑1 (MQ=255)
                                      cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg                                                  <  2:3940429/93‑1 (MQ=255)
                                       aTCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGt                                                 >  1:4676065/1‑93 (MQ=255)
                                        tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTTGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg                                                <  1:6623663/93‑1 (MQ=255)
                                        tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg                                                >  2:3554601/1‑93 (MQ=255)
                                          ccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAt                                              >  2:4046308/1‑93 (MQ=255)
                                           cGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGATGTGGTTAGCTACATATCTTCTGATAACGTACATGGCGGCAAAATCGCTGGTGAtt                                             >  1:6722992/1‑93 (MQ=255)
                                             gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                           >  2:1638174/1‑93 (MQ=255)
                                             gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                           <  1:4356121/93‑1 (MQ=255)
                                             gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                           >  2:4237465/1‑93 (MQ=255)
                                              ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAAATTGCTTCTCCTAACGTACTAGGCGGCAAAATCGCTGGTGATTACa                                          >  1:2773/1‑93 (MQ=255)
                                               tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt                                         >  1:4080554/1‑93 (MQ=255)
                                               tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt                                         <  2:5447111/93‑1 (MQ=255)
                                                  cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                      >  2:1204361/1‑93 (MQ=255)
                                                  cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                      >  2:2726841/1‑93 (MQ=255)
                                                  cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                      <  1:1881650/93‑1 (MQ=255)
                                                    ctctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCga                                    >  2:1903130/1‑93 (MQ=255)
                                                    ctctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCga                                    >  1:3710283/1‑93 (MQ=255)
                                                    ctctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCga                                    >  1:2844375/1‑93 (MQ=255)
                                                     tctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaa                                   >  1:719651/1‑93 (MQ=255)
                                                      ctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaag                                  >  1:5737984/1‑93 (MQ=255)
                                                         taCCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGaaa                               <  2:5707431/92‑1 (MQ=255)
                                                         gACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGaaa                               <  1:609464/93‑1 (MQ=255)
                                                           ccGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGc                             <  2:4524346/93‑1 (MQ=255)
                                                           ccGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGc                             <  2:4382225/93‑1 (MQ=255)
                                                             gCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgg                           <  1:4420934/93‑1 (MQ=255)
                                                             gCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgg                           >  2:2916027/1‑93 (MQ=255)
                                                              ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg                          >  2:2211958/1‑93 (MQ=255)
                                                               cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgggg                         >  1:1383465/1‑92 (MQ=255)
                                                               cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgggg                         >  1:4871214/1‑92 (MQ=255)
                                                               cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGt                         <  2:6583497/93‑1 (MQ=255)
                                                                aGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg                        >  1:2569946/1‑93 (MQ=255)
                                                                 ggCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGa                       <  1:5620009/93‑1 (MQ=255)
                                                                  gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa                      <  1:5334947/93‑1 (MQ=255)
                                                                  gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa                      <  2:3400865/93‑1 (MQ=255)
                                                                    aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg                    <  1:2334582/93‑1 (MQ=255)
                                                                    aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg                    <  2:5278908/93‑1 (MQ=255)
                                                                         aaGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCa               >  2:5396497/1‑93 (MQ=255)
                                                                           ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa             <  2:5553833/93‑1 (MQ=255)
                                                                            gTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAg            <  2:4611959/93‑1 (MQ=255)
                                                                             tGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGt           <  1:1945739/93‑1 (MQ=255)
                                                                              gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt          >  1:4781064/1‑93 (MQ=255)
                                                                              gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGAGAAGGTGCCAAAGtt          >  1:4010288/1‑93 (MQ=255)
                                                                               aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa         <  1:2199026/93‑1 (MQ=255)
                                                                               aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa         >  1:5595598/1‑93 (MQ=255)
                                                                               aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa         <  1:5406914/93‑1 (MQ=255)
                                                                               aaGTCGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa         <  1:2957137/93‑1 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc       >  1:976279/1‑93 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc       <  1:1691371/93‑1 (MQ=255)
                                                                                   ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa     <  2:1163803/93‑1 (MQ=255)
                                                                                     tgAGCTAGATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc   <  1:4404528/93‑1 (MQ=255)
                                                                                      gAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCt  <  2:2570788/93‑1 (MQ=255)
                                                                                      gAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCt  <  1:6575416/93‑1 (MQ=255)
                                                                                          |                                                                                        
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT  >  NC_000913/3934186‑3934364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: