BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,950,224	A→G	I40V (ATC→GTC)	ilvE →	branched‑chain amino‑acid aminotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,950,224	0	A	G	100.0%	873.3 / NA	270	I40V (ATC→GTC)	ilvE	branched‑chain amino‑acid aminotransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (135/135); total (135/135)

Only 100 of 274 total aligned reads displayed.

TGGTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCATCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATCGC  >  NC_000913/3950134‑3950313

tGGTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTc                                                                                         <  1:1515594/93‑1 (MQ=255)

  gTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCg                                                                                       >  1:1049490/1‑93 (MQ=255)

   atCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGt                                                                                      <  1:5272459/92‑1 (MQ=255)

     cAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTg                                                                                    >  2:520788/1‑93 (MQ=255)

      aaTGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGc                                                                                   <  2:1289851/93‑1 (MQ=255)

      aaTGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGc                                                                                   >  2:1772404/1‑93 (MQ=255)

       aTGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCt                                                                                  >  1:6659751/1‑93 (MQ=255)

         ggggAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTAc                                                                                >  1:4556205/1‑93 (MQ=255)

            gagaTGTTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGAc                                                                             <  1:2843480/93‑1 (MQ=255)

            gagaTGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGAc                                                                             >  2:1093214/1‑93 (MQ=255)

            gagaTGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGAc                                                                             <  1:5710862/93‑1 (MQ=255)

             agaTGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACt                                                                            <  2:3779465/93‑1 (MQ=255)

              gaTGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTc                                                                           >  2:1428406/1‑93 (MQ=255)

               aTGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCg                                                                          >  2:854162/1‑93 (MQ=255)

                  gTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGcac                                                                       <  2:2698099/93‑1 (MQ=255)

                  gTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGcac                                                                       >  2:4482596/1‑93 (MQ=255)

                     cGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACaaa                                                                    <  2:2325517/93‑1 (MQ=255)

                     cGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACaaa                                                                    <  2:4710666/93‑1 (MQ=255)

                     cGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACaaa                                                                    <  2:4937987/93‑1 (MQ=255)

                        tGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGa                                                                 <  1:5390748/93‑1 (MQ=255)

                         gggAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGAc                                                                <  2:3392166/93‑1 (MQ=255)

                         gggAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGAc                                                                >  2:5997335/1‑93 (MQ=255)

                         gggAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGAc                                                                >  2:2069530/1‑93 (MQ=255)

                          ggAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGAcc                                                               <  1:690840/93‑1 (MQ=255)

                             aGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGt                                                            <  2:630982/93‑1 (MQ=255)

                             aGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGt                                                            >  1:3002100/1‑93 (MQ=255)

                             aGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGt                                                            >  1:5523059/1‑93 (MQ=255)

                              gACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGtt                                                           >  2:1562109/1‑93 (MQ=255)

                                cgcgAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGt                                                         <  2:1233783/93‑1 (MQ=255)

                                 gcgAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTa                                                        >  1:4059933/1‑93 (MQ=255)

                                 gcgAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTa                                                        <  1:2323788/93‑1 (MQ=255)

                                 ccgAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTa                                                        <  1:3845786/92‑1 (MQ=255)

                                  cgAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTAt                                                       <  1:4821981/93‑1 (MQ=255)

                                   gAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTAtt                                                      >  2:4573076/1‑93 (MQ=255)

                                   gAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTAtt                                                      >  2:421113/1‑93 (MQ=255)

                                    aaGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTc                                                     <  1:4278706/93‑1 (MQ=255)

                                     aGGTGCATGTGATGTCGCACGCGGTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTCATACGACTCGCACAAAGGACCGGTTTTATGcc                                                    >  1:1740712/1‑93 (MQ=255)

                                     aGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTcc                                                    >  1:2274414/1‑93 (MQ=255)

                                     aGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTcc                                                    >  2:4309624/1‑93 (MQ=255)

                                     aGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTcc                                                    >  1:6190704/1‑93 (MQ=255)

                                     aGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTCGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTcc                                                    >  2:335046/1‑93 (MQ=255)

                                       gTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGc                                                  >  1:1900960/1‑93 (MQ=255)

                                        tGCATGTGATGTCGCGCGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGcc                                                 <  1:855682/93‑1 (MQ=255)

                                         gCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCa                                                >  2:5646370/1‑93 (MQ=255)

                                         gCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCa                                                >  2:1742484/1‑93 (MQ=255)

                                           aTGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATc                                              >  1:6063686/1‑93 (MQ=255)

                                           aTGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATc                                              >  1:4003218/1‑93 (MQ=255)

                                             gtgATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGt                                            >  1:6012408/1‑93 (MQ=255)

                                               gATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGa                                          >  2:2431833/1‑93 (MQ=255)

                                               gATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGa                                          <  1:5794433/93‑1 (MQ=255)

                                               gATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGa                                          <  1:1954420/93‑1 (MQ=255)

                                               gATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCATGa                                          >  1:4321791/1‑93 (MQ=255)

                                               gATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCATTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGa                                          <  1:3193524/93‑1 (MQ=255)

                                                aTGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAg                                         >  2:4348800/1‑93 (MQ=255)

                                                aTGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAg                                         >  1:2727557/1‑93 (MQ=255)

                                                 tGTTGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTCTTCCGCCATCGTGAGc                                        >  1:758683/1‑93 (MQ=255)

                                                  gTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCa                                       <  1:1413684/93‑1 (MQ=255)

                                                  gTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCa                                       >  1:5514807/1‑93 (MQ=255)

                                                  gTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCa                                       <  2:6106793/93‑1 (MQ=255)

                                                    cGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCata                                     >  2:4619512/1‑93 (MQ=255)

                                                    cGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCata                                     <  1:2117264/93‑1 (MQ=255)

                                                    cGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCata                                     <  2:5867616/93‑1 (MQ=255)

                                                    cGCACGCGCTGCACTATGGCACTTCGGTTTGTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCata                                     <  1:6138285/93‑1 (MQ=255)

                                                      cACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATg                                   <  2:5357016/93‑1 (MQ=255)

                                                      cACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATg                                   <  1:1023891/93‑1 (MQ=255)

                                                      cACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATg                                   <  2:5141875/93‑1 (MQ=255)

                                                       aCGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGTTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGc                                  >  2:3609859/1‑93 (MQ=255)

                                                          cgcTGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGc                               >  2:1632952/1‑93 (MQ=255)

                                                             tGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTc                            <  1:976895/93‑1 (MQ=255)

                                                             tGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTc                            <  1:4199653/93‑1 (MQ=255)

                                                             tGCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTc                            <  2:3594392/93‑1 (MQ=255)

                                                              gCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCt                           >  2:466667/1‑93 (MQ=255)

                                                              gCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCt                           <  2:4860718/93‑1 (MQ=255)

                                                              gCACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCt                           >  2:713236/1‑93 (MQ=255)

                                                               cACTATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTg                          <  2:289381/93‑1 (MQ=255)

                                                                 cTATGCCACTTCGCTGTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCa                        <  1:3157954/93‑1 (MQ=255)

                                                                  tATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCAt                       <  1:3567014/93‑1 (MQ=255)

                                                                  tATGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCAt                       >  1:370486/1‑93 (MQ=255)

                                                                   aTGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATg                      >  1:1601496/1‑93 (MQ=255)

                                                                    tGGCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGa                     >  2:6073282/1‑93 (MQ=255)

                                                                     ggCACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGAc                    <  2:3910180/93‑1 (MQ=255)

                                                                     ggCACTTAGGTTTTTGAAGGCGTCAGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGAc                    <  1:4624041/93‑1 (MQ=255)

                                                                       cACTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTc                  <  2:3053940/93‑1 (MQ=255)

                                                                        aCTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTcc                 >  2:2230719/1‑93 (MQ=255)

                                                                        aCTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTcc                 <  2:4136816/93‑1 (MQ=255)

                                                                        aCTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTcc                 >  1:5833972/1‑93 (MQ=255)

                                                                         cTTCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCg                >  1:2489738/1‑93 (MQ=255)

                                                                          ttCGGTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGc               >  1:2519139/1‑93 (MQ=255)

                                                                             ggTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCaa            >  1:4768835/1‑93 (MQ=255)

                                                                              gTTTTTGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCaaa           >  1:5934195/1‑93 (MQ=255)

                                                                               tttttGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCaaaa          <  2:1183415/93‑1 (MQ=255)

                                                                                ttttGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAAt         >  2:2554830/1‑93 (MQ=255)

                                                                                 tttGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATc        >  2:6680580/1‑93 (MQ=255)

                                                                                 tttGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATc        <  1:4985544/93‑1 (MQ=255)

                                                                                  ttGAAGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCt       >  2:1941497/1‑93 (MQ=255)

                                                                                     aaGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATc    <  2:14140/93‑1 (MQ=255)

                                                                                     aaGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATc    <  2:6571139/93‑1 (MQ=255)

                                                                                     aaGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATc    <  1:1838947/93‑1 (MQ=255)

                                                                                     aaGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATc    <  2:894467/93‑1 (MQ=255)

                                                                                      aGGCGTCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATCg   >  2:2050106/1‑93 (MQ=255)

TGGTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCATCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATCGC  >  NC_000913/3950134‑3950313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`