BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,950,400	T→C	R98R (CGT→CGC)	ilvE →	branched‑chain amino‑acid aminotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,950,400	0	T	C	100.0%	849.7 / NA	262	R98R (CGT→CGC)	ilvE	branched‑chain amino‑acid aminotransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (143/119); total (143/119)

Only 100 of 294 total aligned reads displayed.

TCGCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGTCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTGGGG  >  NC_000913/3950310‑3950489

tCGCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATAtccgccc                                                                                         >  2:861157/1‑93 (MQ=255)

  gCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATccgcccgc                                                                                       >  2:5215694/1‑93 (MQ=255)

   cTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCt                                                                                      <  2:6063686/93‑1 (MQ=255)

    ttCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTg                                                                                     >  2:2974665/1‑93 (MQ=255)

    ttCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTg                                                                                     >  1:3715992/1‑93 (MQ=255)

     tCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGa                                                                                    >  2:1641557/1‑93 (MQ=255)

        cGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCt                                                                                 <  1:1189942/93‑1 (MQ=255)

        cGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCt                                                                                 >  2:6329076/1‑93 (MQ=255)

        cGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCt                                                                                 <  2:5739734/93‑1 (MQ=255)

        cGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCt                                                                                 <  2:4039227/93‑1 (MQ=255)

          gTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTtc                                                                               <  2:2579415/93‑1 (MQ=255)

           tttCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTtcg                                                                              >  2:3222876/1‑93 (MQ=255)

             tCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTtcgtc                                                                            >  2:438057/1‑93 (MQ=255)

              cGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTtcgtcg                                                                           >  2:3583950/1‑93 (MQ=255)

               gCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCgg                                                                          <  1:1283474/93‑1 (MQ=255)

                cAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGt                                                                         >  1:1081811/1‑93 (MQ=255)

                 agagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTg                                                                        >  2:4731778/1‑93 (MQ=255)

                 agagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTg                                                                        <  2:1716205/93‑1 (MQ=255)

                 agagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTg                                                                        >  2:1932120/1‑93 (MQ=255)

                 agagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTg                                                                        <  1:4436115/93‑1 (MQ=255)

                  gagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGa                                                                       <  1:678387/93‑1 (MQ=255)

                  cagCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGa                                                                       >  1:6014867/2‑93 (MQ=255)

                    gCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATg                                                                     <  1:6228261/93‑1 (MQ=255)

                    gCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATg                                                                     >  1:167562/1‑93 (MQ=255)

                     cATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGt                                                                    >  1:72504/1‑93 (MQ=255)

                     cATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGt                                                                    <  1:828885/93‑1 (MQ=255)

                     cATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGt                                                                    <  1:384082/93‑1 (MQ=255)

                      aTTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGtt                                                                   >  1:4884181/1‑93 (MQ=255)

                      aTTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGtt                                                                   >  1:17952/1‑93 (MQ=255)

                      aTTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGACGtt                                                                   >  1:1800759/1‑93 (MQ=255)

                       ttGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGCTGTTg                                                                  >  1:3131224/1‑93 (MQ=255)

                       ttGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTg                                                                  <  2:4003218/93‑1 (MQ=255)

                          atgaGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCa                                                               <  2:3868447/93‑1 (MQ=255)

                               cTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGa                                                          <  1:2059281/93‑1 (MQ=255)

                               cTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGa                                                          >  2:2146272/1‑93 (MQ=255)

                               cTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGa                                                          <  2:4570166/93‑1 (MQ=255)

                                 gATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGt                                                        <  1:3082255/93‑1 (MQ=255)

                                 gATGGAACTTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGt                                                        <  2:773830/93‑1 (MQ=255)

                                   tGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaa                                                      <  2:4202118/93‑1 (MQ=255)

                                   tGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaa                                                      >  1:5324508/1‑93 (MQ=255)

                                   tGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaa                                                      >  2:5396135/1‑93 (MQ=255)

                                    ggAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaaa                                                     >  1:1931285/1‑93 (MQ=255)

                                    ggAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaaa                                                     <  1:1742484/93‑1 (MQ=255)

                                    ggAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATACCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTaaa                                                     <  2:4599967/93‑1 (MQ=255)

                                       aGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAAccc                                                  >  1:2614424/1‑93 (MQ=255)

                                       aGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAAccc                                                  >  2:5968642/1‑93 (MQ=255)

                                        gCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCg                                                 >  1:4540911/1‑93 (MQ=255)

                                         cTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGc                                                <  2:3019014/93‑1 (MQ=255)

                                          ttGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCCCTGATCTTCGCCGGTGTTTTTGCCAGGGGAGTAACCCCGcc                                               >  1:929107/1‑93 (MQ=255)

                                           tGTCGTGACGTGATCCGCAAAAACAATCTCCCCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCa                                              <  1:4482596/93‑1 (MQ=255)

                                           tGTCGTGACGTGATCAGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCa                                              <  1:1535189/93‑1 (MQ=255)

                                             tCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGc                                            >  2:2064608/1‑93 (MQ=255)

                                               gtgacgtgaGCCGTAAAAACAATCTCACGAGCGCCTATATCCGCCGGGGGATCTTCGTGGGTGAGGTTGGCATGGGAGTAAACCCGCCAGCgg                                          <  1:2931272/93‑1 (MQ=255)

                                                 gacgtgaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGa                                        >  1:3587894/1‑93 (MQ=255)

                                                  acgtgaTCCGAAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGAt                                       <  2:430556/93‑1 (MQ=255)

                                                     tgaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGGTACt                                    >  1:1380093/1‑93 (MQ=255)

                                                     tgaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACt                                    <  1:656916/93‑1 (MQ=255)

                                                     tgaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACt                                    >  1:3009310/1‑93 (MQ=255)

                                                     tgaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACt                                    >  1:2699496/1‑93 (MQ=255)

                                                      gaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTc                                   >  2:2897921/1‑93 (MQ=255)

                                                      gaTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTc                                   >  2:3259593/1‑93 (MQ=255)

                                                       aTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCa                                  <  1:6618979/93‑1 (MQ=255)

                                                       aTCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCa                                  <  1:2280826/93‑1 (MQ=255)

                                                       aTCCGAAAAAACAATTTCACCAGCGCCTACATTCGGCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAACCCCGCCAGCGGGATACTCa                                  <  2:3061627/93‑1 (MQ=255)

                                                        tCCGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCaa                                 <  2:1463230/93‑1 (MQ=255)

                                                          cGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAAcg                               >  2:2277810/1‑92 (MQ=255)

                                                          cGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAAcc                               >  1:5481777/1‑93 (MQ=255)

                                                          cGCAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAAcc                               <  1:3985256/93‑1 (MQ=255)

                                                            cAAAAACAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGa                             <  1:2162308/93‑1 (MQ=255)

                                                              aaaaCAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACg                           >  1:3334587/1‑93 (MQ=255)

                                                               aaaCAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACgg                          >  1:3505431/1‑92 (MQ=255)

                                                               aaaCAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGt                          >  2:136847/1‑93 (MQ=255)

                                                               aaaCAATCTCACCAGCGCCTATACCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGt                          <  1:5795341/93‑1 (MQ=255)

                                                                 acacTCTCCCCAGCGCCTATATCCCCCCGCTGATCTTCGTCGGTGATGTTGCCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGa                        <  1:3558041/93‑1 (MQ=255)

                                                                 aCAATCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGa                        >  2:1663806/1‑93 (MQ=255)

                                                                  cAATCTCACAAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGAt                       <  2:5492235/93‑1 (MQ=255)

                                                                    aTCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTa                     >  1:5182526/1‑93 (MQ=255)

                                                                    aTCTCACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTa                     >  2:4755852/1‑93 (MQ=255)

                                                                     tctcACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTAt                    <  1:4309624/93‑1 (MQ=255)

                                                                       tcACCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCg                  >  1:2801459/1‑93 (MQ=255)

                                                                         aCCAGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCgct                >  1:408443/1‑93 (MQ=255)

                                                                            aGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCgctgct             >  1:3804110/1‑93 (MQ=255)

                                                                            aGCGCCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCgctgct             >  2:1225033/1‑93 (MQ=255)

                                                                             gcgcCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCtt            >  1:5678008/1‑93 (MQ=255)

                                                                             gcgcCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCtt            >  2:6190846/1‑93 (MQ=255)

                                                                              cgcCTATATCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAACCCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCttt           <  1:2455972/93‑1 (MQ=255)

                                                                               cccTATACCCGCCCGCTGATCTTGGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTc          <  2:370486/92‑1 (MQ=255)

                                                                                  tataTCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCg       >  2:52908/1‑93 (MQ=255)

                                                                                  tataTCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCg       >  2:5817542/1‑93 (MQ=255)

                                                                                  tataTCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCg       <  2:1900960/93‑1 (MQ=255)

                                                                                  tataTCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCg       >  1:2318049/1‑93 (MQ=255)

                                                                                  tataTCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCg       >  2:6539613/1‑93 (MQ=255)

                                                                                   atatCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGt      >  1:2546075/1‑93 (MQ=255)

                                                                                   atacCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGt      <  1:4329015/93‑1 (MQ=255)

                                                                                    tatCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTg     >  2:2799075/1‑93 (MQ=255)

                                                                                    tatCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTg     >  1:4680149/1‑93 (MQ=255)

                                                                                    tatCCGCCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTg     <  1:1011752/93‑1 (MQ=255)

                                                                                     atCCGCCCGCTGATCTTCGTCGGGGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTgg    >  2:3786282/1‑93 (MQ=255)

                                                                                      tccgcccgCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTggg   <  2:4815083/93‑1 (MQ=255)

                                                                                      tccgcccgCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTggg   >  2:5607534/1‑93 (MQ=255)

TCGCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGTCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTGGGG  >  NC_000913/3950310‑3950489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`