Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 502,653 C→T intergenic (‑191/+47) ybaL ← / ← fsr putative transport protein/fosmidomycin resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913502,6530CT99.6% 918.2 / NA 256intergenic (‑191/+47)ybaL/fsrputative transport protein/fosmidomycin resistance protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (126/128);  total (128/128)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 259 total aligned reads displayed.

TTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGCGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCAACATC  >  NC_000913/502564‑502742
                                                                                         |                                                                                         
ttattGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGAc                                                                                        >  2:1731896/1‑93 (MQ=255)
  attGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTg                                                                                      >  1:6251866/1‑93 (MQ=255)
  attGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTg                                                                                      <  1:4224417/93‑1 (MQ=255)
   ttGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGt                                                                                     >  2:4049305/1‑93 (MQ=255)
    tGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTa                                                                                    <  1:4469856/93‑1 (MQ=255)
       aTTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTaaaa                                                                                 >  1:5893897/1‑93 (MQ=255)
       aTTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTaaaa                                                                                 <  2:6440753/93‑1 (MQ=255)
       aTTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTaaaa                                                                                 <  2:3604557/93‑1 (MQ=255)
        ttttGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAAc                                                                                >  2:3571740/1‑93 (MQ=255)
        ttttGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAAc                                                                                <  1:5067334/93‑1 (MQ=255)
          ttGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGa                                                                              <  1:2120666/93‑1 (MQ=255)
           tGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGCTGACTGTAAAACGAt                                                                             <  1:6554212/93‑1 (MQ=255)
            gCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATg                                                                            >  1:5043325/1‑93 (MQ=255)
             cAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGc                                                                           <  2:1155978/93‑1 (MQ=255)
              aGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCa                                                                          <  1:3938540/93‑1 (MQ=255)
              aGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCa                                                                          <  2:5254825/93‑1 (MQ=255)
               gAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAg                                                                         <  2:4577190/93‑1 (MQ=255)
               gAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAg                                                                         >  1:5174212/1‑93 (MQ=255)
                 aaaaTGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGcc                                                                       <  2:4762651/93‑1 (MQ=255)
                 aaaaTGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGcc                                                                       >  2:2526174/1‑93 (MQ=255)
                 aaaaTGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGcc                                                                       <  1:6704281/93‑1 (MQ=255)
                      ggAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGt                                                                  <  2:5564661/93‑1 (MQ=255)
                      ggAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGt                                                                  >  2:2635332/1‑93 (MQ=255)
                      ggAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGt                                                                  >  2:675898/1‑93 (MQ=255)
                       gAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGtt                                                                 <  1:565283/93‑1 (MQ=255)
                       gAATGAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGtt                                                                 <  2:5977114/93‑1 (MQ=255)
                         aTTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTg                                                               >  2:4832949/1‑93 (MQ=255)
                         aTTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGGTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTg                                                               >  1:3348950/1‑93 (MQ=255)
                          ttAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGc                                                              >  1:6504629/1‑93 (MQ=255)
                            aGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCt                                                            >  1:5405399/1‑93 (MQ=255)
                             gCTGCAAAAAAAGCACGGATCGGCAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCtt                                                           >  1:1893444/1‑93 (MQ=255)
                             gCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCtt                                                           >  2:4853938/1‑93 (MQ=255)
                              cTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCttt                                                          >  1:2289793/1‑93 (MQ=255)
                               tGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTg                                                         <  2:2290697/93‑1 (MQ=255)
                               tGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTg                                                         >  2:1435748/1‑93 (MQ=255)
                               tGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTg                                                         >  2:401038/1‑93 (MQ=255)
                               tGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTg                                                         >  2:5008139/1‑93 (MQ=255)
                                  aaaaaaaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCt                                                      >  2:3103413/1‑93 (MQ=255)
                                    aaaaaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGc                                                    <  2:6422697/93‑1 (MQ=255)
                                     aaaaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCa                                                   <  1:6115993/93‑1 (MQ=255)
                                      aaaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCaa                                                  >  2:3334362/1‑93 (MQ=255)
                                      aaaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCaa                                                  <  1:6360328/93‑1 (MQ=255)
                                       aaGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAAt                                                 <  2:1206138/93‑1 (MQ=255)
                                        aGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATg                                                <  1:4059311/93‑1 (MQ=255)
                                         gCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGa                                               >  2:2401926/1‑93 (MQ=255)
                                         gCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGa                                               >  2:4297744/1‑93 (MQ=255)
                                          cACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGaa                                              >  1:303073/1‑93 (MQ=255)
                                           aCGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGaaa                                             <  2:698264/93‑1 (MQ=255)
                                            cGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAAt                                            <  1:986734/93‑1 (MQ=255)
                                             ggATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATc                                           >  2:1611833/1‑93 (MQ=255)
                                             ggATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATc                                           <  2:895090/93‑1 (MQ=255)
                                              gATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCa                                          >  1:1175562/1‑93 (MQ=255)
                                                tCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGt                                        >  2:1469054/1‑93 (MQ=255)
                                                tCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGt                                        <  2:3839274/93‑1 (MQ=255)
                                                tCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGt                                        >  1:6687902/1‑93 (MQ=255)
                                                 cGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTc                                       <  1:803455/93‑1 (MQ=255)
                                                  ggAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCt                                      >  1:546414/1‑93 (MQ=255)
                                                  ggAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCt                                      >  2:3458756/1‑93 (MQ=255)
                                                  ggAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCt                                      <  1:4745358/93‑1 (MQ=255)
                                                  ggAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCt                                      <  1:2329311/93‑1 (MQ=255)
                                                   gAAAACAGAAGGCGGTTTAACAGAGGAACGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCtt                                     <  1:2711949/93‑1 (MQ=255)
                                                    aaaaCAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCttt                                    <  2:287423/93‑1 (MQ=255)
                                                     aaaCAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTa                                   <  2:4414572/93‑1 (MQ=255)
                                                        cAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGc                                >  2:1004181/1‑93 (MQ=255)
                                                        cAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGc                                <  1:2193002/93‑1 (MQ=255)
                                                        cAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGATTGCCTTTGGCTGCAATGAAATCAGTCTTTATGc                                >  2:1932033/1‑93 (MQ=255)
                                                         aGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGcc                               >  2:5452603/1‑93 (MQ=255)
                                                         aGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGcc                               <  2:6014441/93‑1 (MQ=255)
                                                         aGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGcc                               <  2:185907/93‑1 (MQ=255)
                                                          gAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCg                              >  2:3283793/1‑93 (MQ=255)
                                                          gAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCg                              >  1:4876912/1‑93 (MQ=255)
                                                           aaGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCgg                             >  1:1966043/1‑93 (MQ=255)
                                                            aGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGt                            <  2:2339596/93‑1 (MQ=255)
                                                            aGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGt                            >  1:1588761/1‑93 (MQ=255)
                                                             ggCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGtt                           >  1:6049914/1‑93 (MQ=255)
                                                              gCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTa                          >  1:4337847/1‑93 (MQ=255)
                                                                 gTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATca                       >  1:3201423/1‑93 (MQ=255)
                                                                 gTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATca                       <  1:1699273/93‑1 (MQ=255)
                                                                 gTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATca                       <  2:5679301/93‑1 (MQ=255)
                                                                 gTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATca                       <  2:5124559/93‑1 (MQ=255)
                                                                  tttAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcag                      <  1:1097968/93‑1 (MQ=255)
                                                                     aaCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggca                   <  1:1234245/93‑1 (MQ=255)
                                                                     aaCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggca                   <  2:1979695/93‑1 (MQ=255)
                                                                      aCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggcag                  >  2:1776493/1‑93 (MQ=255)
                                                                      aCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggcag                  >  2:1076320/1‑93 (MQ=255)
                                                                      aCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggcag                  >  2:2023016/1‑93 (MQ=255)
                                                                      aCAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATcaggcag                  <  1:6032132/93‑1 (MQ=255)
                                                                        agagGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGa                >  1:3715134/1‑93 (MQ=255)
                                                                        agagGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGCTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGa                >  1:6328346/1‑93 (MQ=255)
                                                                         gagGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGaa               >  2:2145114/1‑93 (MQ=255)
                                                                          agGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAat              >  1:3622474/1‑93 (MQ=255)
                                                                           ggAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAata             <  2:5924703/93‑1 (MQ=255)
                                                                            gAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAatat            <  1:1330943/93‑1 (MQ=255)
                                                                                ggCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTc        >  2:2188739/1‑93 (MQ=255)
                                                                                ggCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTc        >  1:6127606/1‑93 (MQ=255)
                                                                                 gCTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCa       >  2:3130434/1‑93 (MQ=255)
                                                                                  cTTATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCaa      >  2:6235609/1‑93 (MQ=255)
                                                                                    tATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTTGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGTCAGGAATATGGTCAACa    <  1:5581695/93‑1 (MQ=255)
                                                                                    tATGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCAACa    <  2:5422299/93‑1 (MQ=255)
                                                                                      tGGTGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCAACATc  >  1:3132559/1‑93 (MQ=255)
                                                                                         |                                                                                         
TTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGCGACTGTAAAACGATGCAGCCAAAGTTTGCCTTTGGCTGCAATGAAATCAGTCTTTATGCCGGTTATCAGGCAGGAATATGGTCAACATC  >  NC_000913/502564‑502742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑