BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,992,894	A→G	T175A (ACG→GCG)	dapF →	diaminopimelate epimerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,992,894	0	A	G	100.0%	879.9 / NA	270	T175A (ACG→GCG)	dapF	diaminopimelate epimerase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/156); total (114/156)

Only 100 of 277 total aligned reads displayed.

GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT  >  NC_000913/3992804‑3992983

  cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt                                                                                       <  1:6681387/93‑1 (MQ=255)

   gagaAGACAATCTTATGCTGCGGGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATCCCGCGGCGGTAGAAGCGCtt                                                                                      <  1:1626638/93‑1 (MQ=255)

   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                                                      >  2:6018854/1‑93 (MQ=255)

   gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                                                      >  1:46994/1‑93 (MQ=255)

    aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg                                                                                     <  2:6176354/93‑1 (MQ=255)

     gCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTgg                                                                                    >  1:6629624/1‑93 (MQ=255)

       aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc                                                                                  >  1:3966955/1‑93 (MQ=255)

        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGTGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  2:4687356/1‑93 (MQ=255)

        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  2:3757264/1‑93 (MQ=255)

        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  2:246023/1‑93 (MQ=255)

        gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 <  2:14864/93‑1 (MQ=255)

         aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                                                >  2:919/1‑93 (MQ=255)

         aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                                                >  1:5919885/1‑93 (MQ=255)

           aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt                                                                              >  1:1520748/1‑93 (MQ=255)

            aTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGtt                                                                             >  2:3183945/1‑93 (MQ=255)

               ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          >  1:821155/1‑93 (MQ=255)

               ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          >  1:103886/1‑93 (MQ=255)

               ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          <  1:3649457/93‑1 (MQ=255)

                tATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTgg                                                                         >  2:474360/1‑93 (MQ=255)

                   gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa                                                                      <  2:5298632/93‑1 (MQ=255)

                   gcggcgTGGTGTCGATGGGAAATCCGCATGGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa                                                                      <  2:2730352/93‑1 (MQ=255)

                   gcggcgTGGTGTCGATCGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa                                                                      <  1:4341016/93‑1 (MQ=255)

                     ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc                                                                    <  2:4356570/93‑1 (MQ=255)

                      gcgTGGTGTCGATGGGCAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc                                                                   >  1:6036995/1‑93 (MQ=255)

                      gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc                                                                   >  2:300834/1‑93 (MQ=255)

                      gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc                                                                   >  2:819144/1‑93 (MQ=255)

                       cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa                                                                  <  1:5559641/93‑1 (MQ=255)

                        gtggtgGCGATGGGAAAGCCGCATTGCGTGATGCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc                                                                 <  1:2176350/93‑1 (MQ=255)

                            tgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                                                             <  1:3921724/93‑1 (MQ=255)

                            tgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                                                             <  2:5090793/93‑1 (MQ=255)

                            tgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc                                                             <  2:4288301/93‑1 (MQ=255)

                              tCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt                                                           <  1:5622735/93‑1 (MQ=255)

                               cGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt                                                          <  2:3605470/93‑1 (MQ=255)

                               cGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt                                                          >  1:6378087/1‑93 (MQ=255)

                               cGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt                                                          <  2:1751121/93‑1 (MQ=255)

                               cGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt                                                          <  2:4960096/93‑1 (MQ=255)

                                gATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt                                                         >  2:4925702/1‑93 (MQ=255)

                                 aTGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtttt                                                        >  2:5194512/1‑93 (MQ=255)

                                 aTGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtttt                                                        <  1:4251593/93‑1 (MQ=255)

                                  tGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                                                       >  2:3894585/1‑93 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  1:930675/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  2:2682896/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  1:612759/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  1:6241755/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  1:1556378/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  2:536510/93‑1 (MQ=255)

                                   gggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      >  2:3428764/1‑93 (MQ=255)

                                    ggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                                                     <  1:356983/93‑1 (MQ=255)

                                    ggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                                                     >  1:3704483/1‑93 (MQ=255)

                                    gcaaaTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                                                     <  2:4189144/91‑1 (MQ=255)

                                        aTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                                                 >  1:1480192/1‑93 (MQ=255)

                                        aTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                                                 <  2:2279651/93‑1 (MQ=255)

                                        aTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                                                 >  2:1972665/1‑93 (MQ=255)

                                          ccGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc                                               >  2:2241830/1‑93 (MQ=255)

                                           cGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcg                                              <  2:1304282/93‑1 (MQ=255)

                                            gCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcgc                                             >  1:5538163/1‑93 (MQ=255)

                                            gCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcgc                                             >  1:1153976/1‑93 (MQ=255)

                                             cATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGcc                                            <  2:189561/93‑1 (MQ=255)

                                              aTTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa                                           <  2:4527555/93‑1 (MQ=255)

                                              aTTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa                                           >  2:5727690/1‑93 (MQ=255)

                                               ttGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa                                          >  1:70335/1‑93 (MQ=255)

                                                 gCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata                                        <  1:6003596/93‑1 (MQ=255)

                                                   gTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc                                      >  1:503001/1‑93 (MQ=255)

                                                     gATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg                                    >  2:1540138/1‑93 (MQ=255)

                                                      aTTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGt                                   >  1:4965005/1‑93 (MQ=255)

                                                       ttCAGGTCGATGATGTCGCTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt                                  <  2:2855048/93‑1 (MQ=255)

                                                       ttCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt                                  <  1:5237692/93‑1 (MQ=255)

                                                        tCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGttt                                 <  1:2974282/93‑1 (MQ=255)

                                                         cAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtttt                                <  2:1370573/93‑1 (MQ=255)

                                                         cAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtttt                                <  1:3911470/93‑1 (MQ=255)

                                                          aGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa                               <  1:3802188/93‑1 (MQ=255)

                                                          aGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa                               <  2:1636523/93‑1 (MQ=255)

                                                          aGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAACGGTTTTa                               <  1:6544473/93‑1 (MQ=255)

                                                          aGGTCGATGAGGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa                               <  1:2610535/93‑1 (MQ=255)

                                                           ggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAt                              <  2:6426223/93‑1 (MQ=255)

                                                           ggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAt                              <  1:3196747/93‑1 (MQ=255)

                                                           ggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAt                              <  1:1012828/93‑1 (MQ=255)

                                                           ggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGCTTTCCGGAGCGCGCCAATATCGGCTTTAt                              >  1:2764764/1‑93 (MQ=255)

                                                            gTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATg                             >  2:1068183/1‑93 (MQ=255)

                                                            gTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATg                             <  1:4387985/93‑1 (MQ=255)

                                                               gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa                          <  1:6513715/93‑1 (MQ=255)

                                                               gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa                          <  1:4558378/93‑1 (MQ=255)

                                                                 tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt                        <  2:4459122/93‑1 (MQ=255)

                                                                 tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt                        <  2:3939559/93‑1 (MQ=255)

                                                                   atgTCGATACCGCGGCTGTAGAAGCGCTTGGTCCTGTCCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTgg                      <  1:4014138/93‑1 (MQ=255)

                                                                   atgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTgg                      <  1:1946026/93‑1 (MQ=255)

                                                                    tgTCGATACCGCGGCGCTAGAAGCGCTTGGTCCTGTTCTGGAAACCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGt                     <  1:787590/93‑1 (MQ=255)

                                                                     gTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGtt                    >  1:5858169/1‑93 (MQ=255)

                                                                      tCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTa                   >  1:3359345/1‑93 (MQ=255)

                                                                       cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa                  >  2:3288044/1‑93 (MQ=255)

                                                                         atgccGCGGCGGTAGAAGCGCTTGGTCCTGTCCGGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  2:3789149/90‑1 (MQ=255)

                                                                         aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                >  2:5867628/1‑93 (MQ=255)

                                                                         aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  1:2285551/93‑1 (MQ=255)

                                                                               cggcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGc          <  1:2850192/93‑1 (MQ=255)

                                                                                  cggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCata       <  2:6539393/93‑1 (MQ=255)

                                                                                  cggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCata       <  2:1430379/93‑1 (MQ=255)

                                                                                   ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat      <  2:5493534/93‑1 (MQ=255)

                                                                                   ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATACCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat      <  2:5569508/93‑1 (MQ=255)

                                                                                    gTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAtt     >  2:2917260/1‑93 (MQ=255)

                                                                                       gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt  <  1:1386501/93‑1 (MQ=255)

GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT  >  NC_000913/3992804‑3992983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`