Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 531,453 T→C intergenic (‑8/‑222) ybbS ← / → ybbT putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913531,4530TC99.6% 915.8 / NA 280intergenic (‑8/‑222)ybbS/ybbTputative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (138/141);  minor base A (1/0);  total (139/141)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 283 total aligned reads displayed.

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542
                                                                                          |                                                                                         
ttACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCAt                                                                                         <  1:748387/93‑1 (MQ=255)
  aCATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcc                                                                                       <  2:6090865/93‑1 (MQ=255)
    aTAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcccc                                                                                     <  2:5174247/93‑1 (MQ=255)
    aTAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcccc                                                                                     <  2:1645437/93‑1 (MQ=255)
    aTAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcccc                                                                                     <  1:6703378/93‑1 (MQ=255)
    aTAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcccc                                                                                     <  1:3275828/93‑1 (MQ=255)
     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    >  1:1198351/1‑93 (MQ=255)
     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    <  2:2067428/93‑1 (MQ=255)
     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    <  2:1544290/93‑1 (MQ=255)
     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    >  1:3451013/1‑93 (MQ=255)
      aaTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtt                                                                                   >  2:5275295/1‑93 (MQ=255)
      aaTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtt                                                                                   <  2:6473044/93‑1 (MQ=255)
      aaTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGATTCTGGATCGAACATCTTCAGGCATCCCCtt                                                                                   >  2:6720660/1‑93 (MQ=255)
       aTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCttt                                                                                  >  2:4601009/1‑93 (MQ=255)
       aTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCttt                                                                                  >  2:3297152/1‑93 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 <  2:581496/93‑1 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 >  1:5582536/1‑93 (MQ=255)
        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 <  1:5323157/93‑1 (MQ=255)
         cGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTa                                                                                >  2:2673578/1‑93 (MQ=255)
         cGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTa                                                                                <  1:4040225/93‑1 (MQ=255)
          gTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaa                                                                               >  1:2897268/1‑93 (MQ=255)
          gTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaa                                                                               >  1:6405408/1‑93 (MQ=255)
            tCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAAt                                                                             <  2:1792278/93‑1 (MQ=255)
            tCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAAt                                                                             >  1:4416760/1‑93 (MQ=255)
               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                          >  1:3852187/1‑93 (MQ=255)
               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                          >  1:4616235/1‑93 (MQ=255)
                 cGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCa                                                                        >  2:1611970/1‑93 (MQ=255)
                 cGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCa                                                                        >  1:3521157/1‑93 (MQ=255)
                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                     <  1:5104792/93‑1 (MQ=255)
                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                     >  1:568167/1‑93 (MQ=255)
                     tttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGtt                                                                    >  1:2276354/1‑93 (MQ=255)
                     ttggAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGtt                                                                    <  1:2665740/90‑1 (MQ=255)
                      ttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTg                                                                   <  2:3584958/93‑1 (MQ=255)
                       tGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGc                                                                  <  1:2176987/93‑1 (MQ=255)
                         aaaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCgg                                                                >  2:5527023/1‑92 (MQ=255)
                         aaaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGt                                                                <  2:4915800/93‑1 (MQ=255)
                         aaaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGt                                                                >  1:1913452/1‑93 (MQ=255)
                            aaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCTCCTTTTAAATCCGCAAGTTGCGTGAt                                                             >  1:6271943/1‑93 (MQ=255)
                             aCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtt                                                            >  1:3071955/1‑93 (MQ=255)
                              cTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAttt                                                           >  1:2520077/1‑93 (MQ=255)
                                tCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTc                                                         <  2:707726/93‑1 (MQ=255)
                                 ccTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCt                                                        <  2:5917393/93‑1 (MQ=255)
                                  cTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCtt                                                       >  2:1130773/1‑93 (MQ=255)
                                  cTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCtt                                                       >  1:2608788/1‑93 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  2:5591142/93‑1 (MQ=255)
                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATATTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCttt                                                      >  2:5336869/1‑92 (MQ=255)
                                      ttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATcc                                                   <  1:5960721/93‑1 (MQ=255)
                                       tCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCct                                                  <  2:3507843/93‑1 (MQ=255)
                                        cAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctc                                                 <  2:3342884/93‑1 (MQ=255)
                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                <  2:2509418/93‑1 (MQ=255)
                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                >  1:4936311/1‑93 (MQ=255)
                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                <  2:3103374/93‑1 (MQ=255)
                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               >  2:3838582/1‑93 (MQ=255)
                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               <  1:6009984/93‑1 (MQ=255)
                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                             >  2:3895003/1‑93 (MQ=255)
                                            aaCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAt                                             >  1:2033552/1‑93 (MQ=255)
                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                            >  2:852230/1‑93 (MQ=255)
                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                            >  1:5770162/1‑93 (MQ=255)
                                              ccGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAttt                                           <  2:3635495/93‑1 (MQ=255)
                                               cGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTa                                          <  1:3965937/93‑1 (MQ=255)
                                                gCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTAt                                         <  2:2983317/93‑1 (MQ=255)
                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        <  1:2767784/93‑1 (MQ=255)
                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        <  2:3427187/93‑1 (MQ=255)
                                                  aaTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCa                                       >  2:1714686/1‑93 (MQ=255)
                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     >  1:6288169/1‑93 (MQ=255)
                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     <  1:3163145/93‑1 (MQ=255)
                                                     gAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTa                                    <  2:121481/93‑1 (MQ=255)
                                                       aaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtt                                  >  2:420975/1‑93 (MQ=255)
                                                       aaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtt                                  >  2:1475347/1‑93 (MQ=255)
                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCTGTAttt                                 >  1:3664439/1‑93 (MQ=255)
                                                        aGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttt                                 <  2:3730137/93‑1 (MQ=255)
                                                         gTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtttt                                <  1:2113644/93‑1 (MQ=255)
                                                           tcGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAATTTTa                              <  2:414397/92‑1 (MQ=255)
                                                           ccGCAAGGTTTCTGGATCGATCATCTTAAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTa                              <  1:1441497/93‑1 (MQ=255)
                                                            cGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTAc                             <  2:5694549/93‑1 (MQ=255)
                                                              cAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACAt                           <  2:4301256/93‑1 (MQ=255)
                                                                 ggTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGAt                        >  2:2598359/1‑93 (MQ=255)
                                                                  gTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATa                       >  1:1002133/1‑93 (MQ=255)
                                                                  gTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATa                       >  1:4144079/1‑93 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     >  1:2493035/1‑93 (MQ=255)
                                                                    ttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAc                     >  1:607655/1‑93 (MQ=255)
                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                   <  2:6310641/93‑1 (MQ=255)
                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                   <  2:2333879/93‑1 (MQ=255)
                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                   <  2:1938856/93‑1 (MQ=255)
                                                                        ggATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTg                 <  2:1029150/93‑1 (MQ=255)
                                                                        ggATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTg                 <  2:1970676/93‑1 (MQ=255)
                                                                           tCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTc              <  2:4092496/93‑1 (MQ=255)
                                                                            cGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCa             <  2:4463292/93‑1 (MQ=255)
                                                                             gAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCaa            >  1:1804577/1‑93 (MQ=255)
                                                                              aaCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAt           <  2:2175860/93‑1 (MQ=255)
                                                                              aaCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAt           >  1:2215202/1‑93 (MQ=255)
                                                                                cATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAttt         <  2:2253874/93‑1 (MQ=255)
                                                                                 aTCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtg        >  2:793715/1‑93 (MQ=255)
                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       <  1:1298058/93‑1 (MQ=255)
                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       >  1:875712/1‑93 (MQ=255)
                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       >  2:2871172/1‑93 (MQ=255)
                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     <  2:5083305/93‑1 (MQ=255)
                                                                                    ttCAGGCATCCCCTTGTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCCATTTGTgg     <  1:6545685/93‑1 (MQ=255)
                                                                                      cAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATACCCCTGTTCAATTTGTGGAc   <  2:6015208/93‑1 (MQ=255)
                                                                                       aGGCATCCGCTTTTAAATCTGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACt  >  1:6568162/1‑93 (MQ=255)
                                                                                          |                                                                                         
TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: