BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,059,790	T→C	intergenic (+66/‑36)	yihM → / → yihN	hypothetical protein/putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,059,790	0	T	C	100.0%	1053.8 / NA	316	intergenic (+66/‑36)	yihM/yihN	hypothetical protein/putative resistance protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (161/155); total (161/155)

Only 100 of 317 total aligned reads displayed.

GGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGT  >  NC_000913/4059700‑4059879

 gCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCaaa                                                                                        <  1:1911778/93‑1 (MQ=255)

  cAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCaaaa                                                                                       <  2:4966243/93‑1 (MQ=255)

   aaaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAAc                                                                                      >  2:6613000/1‑93 (MQ=255)

    aaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACa                                                                                     >  2:233104/1‑93 (MQ=255)

    aaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACa                                                                                     >  1:6073952/1‑93 (MQ=255)

      ccATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGt                                                                                   <  1:2987094/93‑1 (MQ=255)

        aTCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGa                                                                                 <  1:1068131/93‑1 (MQ=255)

        aTCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGa                                                                                 >  1:1031913/1‑93 (MQ=255)

        aTCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGa                                                                                 >  1:4401080/1‑93 (MQ=255)

         tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATTAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAt                                                                                >  2:860571/1‑93 (MQ=255)

         tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAt                                                                                >  2:4442715/1‑93 (MQ=255)

         tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAt                                                                                <  1:3226918/93‑1 (MQ=255)

          cttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAtt                                                                               <  1:6023195/93‑1 (MQ=255)

           ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAttt                                                                              >  2:2228438/1‑93 (MQ=255)

           ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAttt                                                                              <  2:2840584/93‑1 (MQ=255)

           ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAttt                                                                              >  2:2460665/1‑93 (MQ=255)

           ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGAttt                                                                              >  2:2730636/1‑93 (MQ=255)

             ctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTa                                                                            <  2:42714/93‑1 (MQ=255)

             ctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTa                                                                            <  1:4466806/93‑1 (MQ=255)

                 aCCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTaaaaa                                                                        >  2:5377525/1‑93 (MQ=255)

                  ccACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAAt                                                                       >  1:5479890/1‑93 (MQ=255)

                  ccACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAAt                                                                       <  2:5931676/93‑1 (MQ=255)

                     cTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGc                                                                    <  1:2044901/93‑1 (MQ=255)

                     cTAATAAGGTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGc                                                                    >  1:6559875/1‑93 (MQ=255)

                      taataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCt                                                                   >  2:5548657/1‑93 (MQ=255)

                      taataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCt                                                                   >  1:3602442/1‑93 (MQ=255)

                       aataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCtt                                                                  <  1:2594186/93‑1 (MQ=255)

                        ataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTa                                                                 >  1:4124623/1‑93 (MQ=255)

                        ataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTa                                                                 >  1:750091/1‑93 (MQ=255)

                        ataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTa                                                                 >  1:2424474/1‑93 (MQ=255)

                         taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAg                                                                >  1:3488644/1‑93 (MQ=255)

                          aaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAgg                                                               >  1:249755/1‑93 (MQ=255)

                            gTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAgggg                                                             <  2:4099810/93‑1 (MQ=255)

                            gTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAgggg                                                             <  2:3053525/93‑1 (MQ=255)

                             ttttAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGa                                                            <  1:6298381/93‑1 (MQ=255)

                             ttttAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGa                                                            <  2:602361/93‑1 (MQ=255)

                             ttttAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGa                                                            >  1:4033566/1‑93 (MQ=255)

                              tttAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGAt                                                           <  2:6220331/93‑1 (MQ=255)

                              tttAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGAt                                                           >  1:6130876/1‑93 (MQ=255)

                                tAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGt                                                         <  2:1520315/93‑1 (MQ=255)

                                tAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGt                                                         <  2:6292734/93‑1 (MQ=255)

                                 aaCTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGtt                                                        <  2:2527800/93‑1 (MQ=255)

                                 aaCTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGtt                                                        >  1:2719162/1‑93 (MQ=255)

                                 aaCTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTT‑AAAATCGCTTAGGGGATGTTa                                                       >  1:3257043/1‑93 (MQ=255)

                                 aaCTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGATATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGtt                                                        >  2:3558368/1‑93 (MQ=255)

                                   cTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTAt                                                      >  1:1179460/1‑93 (MQ=255)

                                    tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                                                     >  1:5908019/1‑93 (MQ=255)

                                    tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                                                     >  1:1363264/1‑93 (MQ=255)

                                    tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                                                     <  2:2301393/93‑1 (MQ=255)

                                    tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                                                     >  1:867007/1‑93 (MQ=255)

                                    tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                                                     >  1:662101/1‑93 (MQ=255)

                                     cATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGc                                                    >  1:948125/1‑93 (MQ=255)

                                     cATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGc                                                    >  1:2680178/1‑93 (MQ=255)

                                      aTACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCt                                                   >  2:2249056/1‑93 (MQ=255)

                                       tACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTc                                                  >  2:6384584/1‑93 (MQ=255)

                                        aCGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCa                                                 <  2:5255189/93‑1 (MQ=255)

                                        aCGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCa                                                 >  1:1538450/1‑93 (MQ=255)

                                         cGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCAc                                                <  2:5000129/93‑1 (MQ=255)

                                          gCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACg                                               >  2:3799980/1‑93 (MQ=255)

                                            aGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGaa                                             >  1:6449940/1‑93 (MQ=255)

                                               taataaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGaaaaa                                          <  1:3660325/93‑1 (MQ=255)

                                                aataaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAg                                         <  1:2893538/93‑1 (MQ=255)

                                                   aaaaCCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGaaa                                      >  1:3345441/1‑93 (MQ=255)

                                                    aaaCCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAAt                                     >  2:6084550/1‑93 (MQ=255)

                                                     aaCCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATg                                    <  2:4219706/93‑1 (MQ=255)

                                                      aCCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATgg                                   >  1:481163/1‑93 (MQ=255)

                                                      aCCATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATgg                                   >  2:3929926/1‑93 (MQ=255)

                                                       ccATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATggg                                  >  2:6515555/1‑93 (MQ=255)

                                                        cATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGc                                 <  2:4846764/93‑1 (MQ=255)

                                                        cATTCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGc                                 <  2:4168680/93‑1 (MQ=255)

                                                          ttCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt                               <  2:1952943/93‑1 (MQ=255)

                                                          ttCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt                               >  1:3933648/1‑93 (MQ=255)

                                                           tCCATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                              <  2:4115320/93‑1 (MQ=255)

                                                            ccATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTa                             <  2:3697578/93‑1 (MQ=255)

                                                             cATATGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                            >  1:432410/1‑93 (MQ=255)

                                                               tatGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                          <  2:122913/93‑1 (MQ=255)

                                                               tatGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                          >  1:5171951/1‑93 (MQ=255)

                                                                atGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTa                         <  1:4959797/93‑1 (MQ=255)

                                                                 tGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                        <  2:4804683/93‑1 (MQ=255)

                                                                 tGAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                        >  1:5539093/1‑93 (MQ=255)

                                                                  gAATGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGAGCGTTATTTAGt                       >  1:4222071/1‑93 (MQ=255)

                                                                    aTGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCt                     <  1:5361067/93‑1 (MQ=255)

                                                                     tGGTCGGTATCTTCTTGCCTTCAAAACAGCGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGACATCGGCGTTATTTAGTCTa                    >  1:1306292/1‑93 (MQ=255)

                                                                     tGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTa                    >  2:3103582/1‑93 (MQ=255)

                                                                     tGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTa                    <  2:5469818/93‑1 (MQ=255)

                                                                     tGGTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTa                    >  1:3052534/1‑93 (MQ=255)

                                                                      ggTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTAt                   <  2:6249695/93‑1 (MQ=255)

                                                                      ggTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTAt                   <  2:1761029/93‑1 (MQ=255)

                                                                       gTCGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTAtt                  >  1:2621101/1‑93 (MQ=255)

                                                                         cGGTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTaa                <  2:6678626/93‑1 (MQ=255)

                                                                          ggTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAac               >  2:566393/1‑93 (MQ=255)

                                                                           gTATCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAaca              >  2:552659/1‑93 (MQ=255)

                                                                             aTCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACt            >  1:3279111/1‑93 (MQ=255)

                                                                              tCTTATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACtg           <  1:2315406/93‑1 (MQ=255)

                                                                                ttATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACtgtg         <  1:5778804/93‑1 (MQ=255)

                                                                                 tATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAaca              >  1:470834/1‑87 (MQ=255)

                                                                                 tATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAaca              <  2:470834/87‑1 (MQ=255)

                                                                                 tATTGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACtgtgt        <  2:2981294/93‑1 (MQ=255)

                                                                                    tGCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGc     >  2:2090301/1‑93 (MQ=255)

                                                                                     gCCTTCAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCg    >  1:5656477/1‑93 (MQ=255)

GGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGT  >  NC_000913/4059700‑4059879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`