BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,112,113	T→C	intergenic (‑61/+36)	fpr ← / ← glpX	ferredoxin‑NADP reductase/GlpX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,112,113	0	T	C	100.0%	935.7 / NA	285	intergenic (‑61/+36)	fpr/glpX	ferredoxin‑NADP reductase/GlpX
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (160/125); total (160/125)

Only 100 of 301 total aligned reads displayed.

AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202

aGTGACTGTGCCTGTTACCCATTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGccc                                                                                         <  2:2807897/93‑1 (MQ=255)

 gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc                                                                                        >  2:270582/1‑93 (MQ=255)

 gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc                                                                                        >  1:3566657/1‑93 (MQ=255)

 gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc                                                                                        >  2:5409990/1‑93 (MQ=255)

     cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg                                                                                    >  2:6679004/1‑93 (MQ=255)

     cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg                                                                                    >  1:6225256/1‑93 (MQ=255)

     cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg                                                                                    >  1:2235806/1‑93 (MQ=255)

       ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  <  2:5043201/93‑1 (MQ=255)

       ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  >  1:3034059/1‑93 (MQ=255)

        tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  2:1067688/93‑1 (MQ=255)

        tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 >  1:5163767/1‑93 (MQ=255)

         gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGACGGACt                                                                                >  1:1932129/1‑93 (MQ=255)

          ccTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTg                                                                               >  1:287856/1‑93 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  2:6075597/1‑93 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:5229382/1‑93 (MQ=255)

             gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  2:442797/93‑1 (MQ=255)

             gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCAGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  2:4726351/93‑1 (MQ=255)

              ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg                                                                           >  1:4277430/1‑93 (MQ=255)

                 cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt                                                                        >  2:3123317/1‑93 (MQ=255)

                    aaTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCaa                                                                     <  1:4098211/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCTTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    <  1:3985586/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  1:1203314/1‑93 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    <  1:5610706/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    <  2:5491760/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  1:5857551/1‑93 (MQ=255)

                      tCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATc                                                                   <  2:4310494/93‑1 (MQ=255)

                       cAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCg                                                                  <  2:5241463/93‑1 (MQ=255)

                         gCCATTGTTTTCTCCTGTTTTGAGTGACTTGCCTTATCTTCGTGCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                <  1:2722262/93‑1 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  2:1936822/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  2:3949385/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  2:2492572/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  1:4558791/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  2:4561069/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  1:1537203/1‑93 (MQ=255)

                          ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc                                                               <  1:5134522/93‑1 (MQ=255)

                          ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc                                                               <  1:3076355/93‑1 (MQ=255)

                          acATGTTTTTCTCCTGTTTTGATAGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGTACTGAAAGGCTCAATCGatc                                                               <  1:4991539/92‑1 (MQ=255)

                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              <  1:881805/93‑1 (MQ=255)

                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              <  1:597333/93‑1 (MQ=255)

                            aTGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaa                                                             >  2:3994037/1‑93 (MQ=255)

                              gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  2:6265241/1‑93 (MQ=255)

                               tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc                                                          >  2:3261729/1‑93 (MQ=255)

                               tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAATGGAAGGCTCAATCGatcaaatc                                                          >  2:1386351/1‑93 (MQ=255)

                                   tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc                                                      >  2:3331170/1‑93 (MQ=255)

                                    ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCACGAAGGACTGGACGGATCAATCGATCAAatcaatca                                                     >  1:3334924/1‑93 (MQ=255)

                                     tcCTGTTTTGATTGACTTGCCTTATCTTCTTTCTCCGAACAAAAAAATTCCAGACACGAAGGCCTGGAAGGCTCAATCGCTCTAATCAATCag                                                    >  1:1503191/1‑93 (MQ=255)

                                     tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  2:1185540/1‑93 (MQ=255)

                                     tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  1:2302633/1‑93 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  1:4029622/93‑1 (MQ=255)

                                       cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag                                                  <  1:576191/93‑1 (MQ=255)

                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                >  2:2540502/1‑93 (MQ=255)

                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               >  2:701087/1‑93 (MQ=255)

                                           tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg                                              <  1:2777186/93‑1 (MQ=255)

                                            ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt                                             <  1:3118722/93‑1 (MQ=255)

                                            ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt                                             >  2:3853066/1‑93 (MQ=255)

                                               attgaCTTGCCTTATCTTCGTTCTCCTAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa                                          >  2:2361927/1‑93 (MQ=255)

                                                ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc                                         <  2:769254/93‑1 (MQ=255)

                                                ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc                                         >  2:2876023/1‑93 (MQ=255)

                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCGATCAGAGGATGTGCACCt                                       >  1:2146397/1‑93 (MQ=255)

                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt                                       >  2:6437959/1‑93 (MQ=255)

                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATCCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt                                       <  2:275727/93‑1 (MQ=255)

                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGc                                     <  1:4145927/93‑1 (MQ=255)

                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGc                                     <  1:1391225/93‑1 (MQ=255)

                                                     ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa                                    <  1:4751926/93‑1 (MQ=255)

                                                       gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt                                  >  2:6357001/1‑93 (MQ=255)

                                                       gCCTTATCTTCGTTCTCCGAACAAAAAAATACCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATCTGCACCTGCAtt                                  <  2:3894838/93‑1 (MQ=255)

                                                         ctaaTCTCCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                <  1:4877764/90‑1 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  1:1650424/1‑93 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  2:3059113/1‑93 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  2:5283226/1‑93 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                <  1:5520856/93‑1 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  2:872564/1‑93 (MQ=255)

                                                          ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc                               >  2:3666458/1‑93 (MQ=255)

                                                          ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc                               >  2:5822009/1‑93 (MQ=255)

                                                           tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              >  2:947733/1‑93 (MQ=255)

                                                            aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTTAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg                             >  1:2982520/1‑93 (MQ=255)

                                                            aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg                             <  2:2274128/93‑1 (MQ=255)

                                                             tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            <  1:3493831/93‑1 (MQ=255)

                                                              cTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGt                           <  2:4466922/93‑1 (MQ=255)

                                                               ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  1:6607877/1‑93 (MQ=255)

                                                               ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  1:1571418/1‑93 (MQ=255)

                                                               ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  2:4174300/1‑93 (MQ=255)

                                                                 cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt                        <  1:6098159/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       >  2:2600187/1‑93 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATGCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  1:1105772/93‑1 (MQ=255)

                                                                      tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa                   >  2:5593402/1‑93 (MQ=255)

                                                                      tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa                   <  1:5318067/93‑1 (MQ=255)

                                                                        cGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATc                 >  2:181953/1‑93 (MQ=255)

                                                                        cGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATc                 >  2:3751330/1‑93 (MQ=255)

                                                                         gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc                >  2:575641/1‑93 (MQ=255)

                                                                         gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc                <  1:3753997/93‑1 (MQ=255)

                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               >  1:5939956/1‑93 (MQ=255)

                                                                            cAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGa             >  1:450089/1‑93 (MQ=255)

                                                                             aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt            <  1:242062/93‑1 (MQ=255)

                                                                              aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa           >  1:204032/1‑93 (MQ=255)

                                                                               aaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg          <  2:4679002/93‑1 (MQ=255)

                                                                                aaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGCGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGt         <  2:3560243/93‑1 (MQ=255)

                                                                                 aaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtg        <  2:1474946/93‑1 (MQ=255)

                                                                                  aaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgg       <  2:2091222/93‑1 (MQ=255)

                                                                                   aTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgga      <  2:6567658/93‑1 (MQ=255)

AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`