BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,158,977	T→C	V111A (GTC→GCC)	yijC →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,158,977	0	T	C	100.0%	933.9 / NA	289	V111A (GTC→GCC)	yijC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/163); total (126/163)

Only 100 of 299 total aligned reads displayed.

TGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTG  >  NC_000913/4158887‑4159066

tGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGcct                                                                                         <  2:1350700/93‑1 (MQ=255)

 ggTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGcctc                                                                                        <  2:2343872/93‑1 (MQ=255)

  gTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTcc                                                                                       <  2:1238681/93‑1 (MQ=255)

         agagCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTa                                                                                <  1:397980/93‑1 (MQ=255)

         agagCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTa                                                                                <  1:4559028/93‑1 (MQ=255)

          gagCGGTTTATTGCTACGCGAGCTCATGCGCCAGGCGCCTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCGCCTCGGCCTCCACATTTAt                                                                               <  1:3140440/93‑1 (MQ=255)

          gagCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTAt                                                                               >  1:1029875/1‑93 (MQ=255)

            gCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATgg                                                                             >  2:1085864/1‑93 (MQ=255)

            gCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATgg                                                                             <  1:4697754/93‑1 (MQ=255)

             cGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGa                                                                            <  2:877594/93‑1 (MQ=255)

               gTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGt                                                                          >  1:6684949/1‑93 (MQ=255)

                tttAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGtt                                                                         <  2:6083603/93‑1 (MQ=255)

                tttAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGtt                                                                         >  1:6075788/1‑93 (MQ=255)

                cttAATGCTACGCCAACTCATGCGCCAGGCGCATCAGCATATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGtt                                                                         <  1:4855802/92‑1 (MQ=255)

                  tAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCa                                                                       <  2:164039/93‑1 (MQ=255)

                   aaTGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCAt                                                                      <  2:5648370/93‑1 (MQ=255)

                   aaTGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCAt                                                                      <  1:1164514/93‑1 (MQ=255)

                    aTGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATc                                                                     <  2:6640384/93‑1 (MQ=255)

                    aTGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGACTTCATc                                                                     <  1:5554271/93‑1 (MQ=255)

                    aTGCTACGCAAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATc                                                                     <  1:1929294/93‑1 (MQ=255)

                     tGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCg                                                                    <  2:2782635/93‑1 (MQ=255)

                      gCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCgg                                                                   >  1:2867655/1‑93 (MQ=255)

                      gCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCgg                                                                   >  1:5014792/1‑93 (MQ=255)

                         aCGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaa                                                                >  2:2960998/1‑93 (MQ=255)

                         aCGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaa                                                                <  1:477042/93‑1 (MQ=255)

                         aCGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaa                                                                <  2:2054597/93‑1 (MQ=255)

                         aCGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaa                                                                <  2:1967981/93‑1 (MQ=255)

                           gCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaata                                                              >  2:5465534/1‑93 (MQ=255)

                            ccAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaataa                                                             <  2:4573211/93‑1 (MQ=255)

                            ccAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaataa                                                             <  1:2614576/93‑1 (MQ=255)

                            ccAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGtaataa                                                             <  1:4259698/93‑1 (MQ=255)

                              aaCTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATc                                                           >  2:5384613/1‑93 (MQ=255)

                              aaCTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATc                                                           <  1:2360081/93‑1 (MQ=255)

                               aCTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATcc                                                          >  1:178006/1‑93 (MQ=255)

                                cTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCt                                                         <  2:3722779/93‑1 (MQ=255)

                                cTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCt                                                         <  2:1730928/93‑1 (MQ=255)

                                cTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCt                                                         >  1:5296087/1‑93 (MQ=255)

                                  cATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTaa                                                       <  1:6658334/93‑1 (MQ=255)

                                  cATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTaa                                                       <  2:679375/93‑1 (MQ=255)

                                   aTGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAAc                                                      >  2:6184655/1‑93 (MQ=255)

                                    tGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACg                                                     <  1:2215862/93‑1 (MQ=255)

                                     gcgcCAGGCGCGTCAGCGTAGCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGc                                                    <  2:2709967/93‑1 (MQ=255)

                                      cgcCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGcc                                                   <  1:2098808/93‑1 (MQ=255)

                                       gcCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCt                                                  >  2:764133/1‑93 (MQ=255)

                                       gcCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGCCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCt                                                  <  2:3563804/93‑1 (MQ=255)

                                        ccAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCtt                                                 >  2:1404609/1‑93 (MQ=255)

                                        ccAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGGGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCtt                                                 >  1:2513995/1‑93 (MQ=255)

                                        ccAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGGGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCtc                                                 >  2:3378765/1‑92 (MQ=255)

                                         cAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCTCCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTc                                                <  2:6529020/93‑1 (MQ=255)

                                          aGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTcc                                               <  2:4746742/93‑1 (MQ=255)

                                          aGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTcc                                               >  1:1502974/1‑93 (MQ=255)

                                          aGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTcc                                               >  1:3292874/1‑93 (MQ=255)

                                          aGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTcc                                               <  1:6356950/93‑1 (MQ=255)

                                          aGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTcc                                               >  1:3379244/1‑93 (MQ=255)

                                           ggCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCg                                              <  2:6235298/93‑1 (MQ=255)

                                           ggCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCg                                              <  1:963892/93‑1 (MQ=255)

                                           ggCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCg                                              <  1:4444005/93‑1 (MQ=255)

                                           ggCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCg                                              <  1:770529/93‑1 (MQ=255)

                                           ggCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCg                                              <  2:212267/93‑1 (MQ=255)

                                             cgcgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGt                                            <  1:4625401/93‑1 (MQ=255)

                                             cgcgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGCCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGt                                            <  2:584288/93‑1 (MQ=255)

                                              gcgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGtt                                           >  2:1576841/1‑93 (MQ=255)

                                               cgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGtta                                          >  2:2456568/1‑93 (MQ=255)

                                               cgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGtta                                          <  1:6145065/93‑1 (MQ=255)

                                               cgTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGtta                                          >  1:599175/1‑93 (MQ=255)

                                                gTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttat                                         <  2:3189912/93‑1 (MQ=255)

                                                gTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttat                                         <  2:4968521/93‑1 (MQ=255)

                                                gTCAGCGTATCACCAAAGGCGGGAGTGTGATCCCCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttat                                         <  2:5559801/93‑1 (MQ=255)

                                                 tCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttatt                                        <  1:6492566/93‑1 (MQ=255)

                                                  cAGCTTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttatta                                       <  1:5210305/93‑1 (MQ=255)

                                                  cAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGttatta                                       >  2:6600812/1‑93 (MQ=255)

                                                    gCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTattatt                                     >  1:3090297/1‑93 (MQ=255)

                                                      gTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGc                                   >  2:4865399/1‑93 (MQ=255)

                                                      gTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGc                                   >  1:710587/1‑93 (MQ=255)

                                                           gCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGaa                              <  2:3256612/93‑1 (MQ=255)

                                                           gCCAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGaa                              <  1:3743146/93‑1 (MQ=255)

                                                            ccAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAAc                             >  2:5799470/1‑93 (MQ=255)

                                                             cAAAGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACg                            <  1:1325329/93‑1 (MQ=255)

                                                              aaaGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGc                           <  1:4174607/93‑1 (MQ=255)

                                                              aaaGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGc                           >  2:2588122/1‑93 (MQ=255)

                                                              aaaGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGc                           <  2:5184398/93‑1 (MQ=255)

                                                               aaGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCt                          >  1:3555320/1‑93 (MQ=255)

                                                               aaGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCt                          <  1:2192889/93‑1 (MQ=255)

                                                                aGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTc                         <  2:4692827/93‑1 (MQ=255)

                                                                aGGCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTc                         >  2:3468904/1‑93 (MQ=255)

                                                                 ggCGGGAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTcc                        <  1:1417823/93‑1 (MQ=255)

                                                                    gggAGTGTGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGc                     <  1:4352447/93‑1 (MQ=255)

                                                                       agggtgATCCGCACCTCGGCCGCCACATTTATGGAGTTCATCGGTAATGATCCTAACGCCTTCCGGTTAGTATTGCTGGTACGCTCCGGCAcc                  >  1:2390709/4‑93 (MQ=255)

                                                                        gtgtGATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCt                 <  1:3926190/93‑1 (MQ=255)

                                                                          gtgATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTcc               <  2:6391929/93‑1 (MQ=255)

                                                                           tgATCCGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCg              <  2:3892475/93‑1 (MQ=255)

                                                                               ccGCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGc          <  2:1839047/93‑1 (MQ=255)

                                                                                 gCACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGt        >  2:1182326/1‑93 (MQ=255)

                                                                                  cACCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGtt       >  1:4133492/1‑93 (MQ=255)

                                                                                   cccTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGttt      <  2:4261614/92‑1 (MQ=255)

                                                                                   aCCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGttt      >  2:4437767/1‑93 (MQ=255)

                                                                                   aCCTCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGttt      <  2:3104039/93‑1 (MQ=255)

                                                                                      tCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGt   >  2:599873/1‑93 (MQ=255)

                                                                                      tCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGt   >  1:1564338/1‑93 (MQ=255)

                                                                                      tCGGCCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGt   >  1:833615/1‑93 (MQ=255)

TGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTG  >  NC_000913/4158887‑4159066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`