BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	578,967	T→C	intergenic (‑108/‑136)	ybcV ← / → ybcW	putative envelope protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	578,967	0	T	C	100.0%	941.2 / NA	288	intergenic (‑108/‑136)	ybcV/ybcW	putative envelope protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (159/129); total (159/129)

Only 100 of 298 total aligned reads displayed.

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  1:316458/93‑1 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        >  1:3777814/1‑93 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        <  1:3964361/93‑1 (MQ=255)

  aTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCgg                                                                                       <  1:5840487/93‑1 (MQ=255)

   tCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGt                                                                                      <  2:2357518/93‑1 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:4214323/93‑1 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:2897189/93‑1 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    >  1:6159604/1‑93 (MQ=255)

     tGGTCTGACCTCTTCGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    >  1:4235598/1‑93 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  >  2:4476808/1‑93 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  <  1:5475859/93‑1 (MQ=255)

         cTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgct                                                                                >  1:1596315/1‑93 (MQ=255)

         cTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgct                                                                                <  1:807792/93‑1 (MQ=255)

          tGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgctg                                                                               <  1:2348492/93‑1 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              <  2:4758626/93‑1 (MQ=255)

            aCCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGc                                                                             >  1:5723729/1‑93 (MQ=255)

             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            >  1:1140845/1‑93 (MQ=255)

             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            >  2:1167789/1‑93 (MQ=255)

              ctctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAt                                                                           >  1:1871735/1‑93 (MQ=255)

               tctTTGTGTTTTGTTGGTGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAtt                                                                          >  2:6661789/1‑93 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:1034882/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:2451607/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:5574937/93‑1 (MQ=255)

                 tttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCt                                                                        <  1:5906231/93‑1 (MQ=255)

                 tttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCt                                                                        >  2:3277086/1‑93 (MQ=255)

                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     <  1:1511269/93‑1 (MQ=255)

                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     <  1:5343434/93‑1 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  1:305358/93‑1 (MQ=255)

                         ttgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaa                                                                >  1:5619567/1‑93 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             >  2:4288744/1‑93 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             >  2:1364379/1‑93 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             >  1:4779941/1‑93 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATCTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             <  2:6447847/93‑1 (MQ=255)

                             tgatgaTTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATAc                                                            <  2:5436322/93‑1 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           >  1:4669696/1‑93 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         >  2:4547486/1‑93 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        <  2:6618273/93‑1 (MQ=255)

                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGAGAAATACAACCg                                                       >  2:2798905/1‑93 (MQ=255)

                                   tttATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGa                                                      >  1:5138988/1‑93 (MQ=255)

                                    ttATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGAc                                                     >  2:3417011/1‑93 (MQ=255)

                                      aTGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAg                                                   >  2:5340137/1‑93 (MQ=255)

                                       tGTCAAATATTAGGAATGTTTGCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGa                                                  <  1:2071905/93‑1 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 >  1:2661385/1‑93 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 <  2:3676205/93‑1 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 >  2:2833020/1‑93 (MQ=255)

                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                <  2:2245446/93‑1 (MQ=255)

                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                <  2:5054852/93‑1 (MQ=255)

                                          cAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgt                                               <  2:1412165/93‑1 (MQ=255)

                                           aaaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGTTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgta                                              <  1:6515700/93‑1 (MQ=255)

                                            aaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtat                                             >  2:2054632/1‑93 (MQ=255)

                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                           <  2:1525820/93‑1 (MQ=255)

                                               atTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAtgtatgta                                          >  2:3799695/1‑93 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAGGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:5262266/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:5162426/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  1:2205282/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         >  2:3904866/1‑93 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         >  1:3908759/1‑93 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:876643/93‑1 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        <  1:3528643/93‑1 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        >  2:3076608/1‑93 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      >  2:5791500/1‑93 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      <  1:4495634/93‑1 (MQ=255)

                                                    gAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGcc                                     <  2:754306/93‑1 (MQ=255)

                                                     aaTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCa                                    >  2:6304388/1‑93 (MQ=255)

                                                     aaTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCa                                    <  1:1762743/93‑1 (MQ=255)

                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   <  1:2785317/93‑1 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  2:1878851/1‑93 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  <  2:2580104/93‑1 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  1:405558/1‑93 (MQ=255)

                                                        gTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACg                                 <  1:1967682/93‑1 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                <  2:2624387/93‑1 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                <  1:367837/93‑1 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                >  2:4062918/1‑93 (MQ=255)

                                                            tCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCt                             >  1:1381609/1‑93 (MQ=255)

                                                             cAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTc                            >  2:4380182/1‑93 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCa                           >  1:2083005/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  2:6014372/1‑93 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         >  2:4869047/1‑93 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         <  1:6051642/93‑1 (MQ=255)

                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        >  2:496382/1‑93 (MQ=255)

                                                                  aaTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAcc                       <  1:5769900/93‑1 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  2:2739942/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:4139160/1‑93 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  1:4564130/1‑93 (MQ=255)

                                                                     aGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTc                    >  2:5547305/1‑93 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  1:671023/1‑93 (MQ=255)

                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                >  2:3976352/1‑93 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               >  2:3357202/1‑93 (MQ=255)

                                                                             ttGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaa            >  1:1205753/1‑93 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:5594076/93‑1 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  1:3574471/93‑1 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           >  2:582339/1‑93 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           >  2:174551/1‑93 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:2186918/93‑1 (MQ=255)

                                                                                cGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGa         <  1:493532/93‑1 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        <  1:6269969/93‑1 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       >  2:6704579/1‑93 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      >  2:5715311/1‑93 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  1:3319871/93‑1 (MQ=255)

                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  >  1:3027268/1‑93 (MQ=255)

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`