BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	591,166	A→G	G412G (GGT→GGC)	nfrB ←	NfrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	591,166	0	A	G	100.0%	824.5 / NA	247	G412G (GGT→GGC)	nfrB	NfrB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/129); total (118/129)

Only 100 of 250 total aligned reads displayed.

GAAAAGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCATA  >  NC_000913/591076‑591255

gAAAAGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGcc                                                                                         >  1:3378526/1‑93 (MQ=255)

gAAAAGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGcc                                                                                         >  2:5544066/1‑93 (MQ=255)

  aaaGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCaa                                                                                       >  1:1042013/1‑93 (MQ=255)

   aaGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCaaa                                                                                      <  2:4150817/93‑1 (MQ=255)

   aaGACGCAGGACGAAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCaaa                                                                                      <  1:5721649/93‑1 (MQ=255)

    aGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAg                                                                                     >  1:1228282/1‑93 (MQ=255)

    aGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAg                                                                                     >  2:4618751/1‑93 (MQ=255)

    aGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAg                                                                                     >  2:3453022/1‑93 (MQ=255)

    aGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAg                                                                                     >  2:598474/1‑93 (MQ=255)

      aCGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGtt                                                                                   >  1:4092082/1‑93 (MQ=255)

      aCGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGtt                                                                                   <  2:3857795/93‑1 (MQ=255)

      aCGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGtt                                                                                   >  2:4401721/1‑93 (MQ=255)

      aCGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGtt                                                                                   <  2:6609896/93‑1 (MQ=255)

       cGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGttt                                                                                  <  2:1938436/93‑1 (MQ=255)

        gCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTa                                                                                 >  2:3081684/1‑93 (MQ=255)

        gCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTa                                                                                 <  2:4023010/93‑1 (MQ=255)

        cgcagACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTa                                                                                 <  2:2481045/89‑1 (MQ=255)

         cAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAg                                                                                <  1:3322050/93‑1 (MQ=255)

          aGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGc                                                                               >  2:909513/1‑93 (MQ=255)

          aGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGc                                                                               <  2:6272681/93‑1 (MQ=255)

          aGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGc                                                                               >  2:1537006/1‑93 (MQ=255)

           ggACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCACTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGcc                                                                              <  1:5181723/93‑1 (MQ=255)

            gACGAAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCca                                                                             <  1:1762114/93‑1 (MQ=255)

             aCGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCcac                                                                            >  2:6337452/1‑93 (MQ=255)

               ggAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcag                                                                          <  2:1022900/93‑1 (MQ=255)

                gAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagc                                                                         >  1:4478599/1‑93 (MQ=255)

                gAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagc                                                                         >  1:4296061/1‑93 (MQ=255)

                gAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagc                                                                         <  2:5817722/93‑1 (MQ=255)

                 aaaGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagca                                                                        <  2:2765121/93‑1 (MQ=255)

                 aaaGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagca                                                                        <  2:3041025/93‑1 (MQ=255)

                  aaGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagcag                                                                       <  2:4354898/93‑1 (MQ=255)

                  aaGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCAcagcag                                                                       <  1:317706/93‑1 (MQ=255)

                   agcagcCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAgg                                                                      <  2:2296777/93‑1 (MQ=255)

                    gcagcCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAggg                                                                     >  2:5213204/1‑93 (MQ=255)

                     cagcCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGt                                                                    <  2:1407435/93‑1 (MQ=255)

                         cccTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCAtt                                                                <  1:2966163/93‑1 (MQ=255)

                         cccTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCAtt                                                                >  2:6023201/1‑93 (MQ=255)

                          ccTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTa                                                               <  1:5064817/93‑1 (MQ=255)

                           cTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTaa                                                              >  1:171993/1‑93 (MQ=255)

                            tGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAAc                                                             >  1:2300104/1‑93 (MQ=255)

                              gtgcAGGCCGTAGTAGCCAGTAACGAAAATCGCCCGCGGCACGATGCGTTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCa                                                           <  1:225702/90‑1 (MQ=255)

                              cGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCa                                                           <  1:4896464/93‑1 (MQ=255)

                               gTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCAt                                                          >  2:5665968/1‑93 (MQ=255)

                                tCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATg                                                         >  2:6200548/1‑93 (MQ=255)

                                tCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATg                                                         <  1:5453286/93‑1 (MQ=255)

                                 cAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATgc                                                        >  1:6582782/1‑93 (MQ=255)

                                  aGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGCTTAGCCACAGCAGGGTCATTAACCATgcg                                                       >  2:5501277/1‑93 (MQ=255)

                                   ggCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATgcgc                                                      <  2:3583066/93‑1 (MQ=255)

                                   ggCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATgcgc                                                      >  1:1909917/1‑93 (MQ=255)

                                   ggCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATgcgc                                                      <  1:1516431/93‑1 (MQ=255)

                                   ggCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATgcgc                                                      <  1:4447891/93‑1 (MQ=255)

                                    gCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCt                                                     <  1:6083093/93‑1 (MQ=255)

                                    gCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCt                                                     <  1:775555/93‑1 (MQ=255)

                                     ccGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTg                                                    >  2:6313343/1‑93 (MQ=255)

                                       gtagtaGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGcc                                                  >  2:4049166/1‑93 (MQ=255)

                                        tagtagCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCg                                                 >  2:4537765/1‑93 (MQ=255)

                                          gtagCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCt                                               >  1:842668/1‑93 (MQ=255)

                                          gtagCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCt                                               >  2:792455/1‑93 (MQ=255)

                                             gCCAGTAACGAAAATCGCCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGaa                                            <  1:1326857/93‑1 (MQ=255)

                                             gCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGaa                                            <  1:2707898/93‑1 (MQ=255)

                                               cAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGaaaa                                          >  1:6720842/1‑93 (MQ=255)

                                                aGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAAt                                         >  1:5495351/1‑93 (MQ=255)

                                                 gTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATa                                        <  2:5042141/93‑1 (MQ=255)

                                                  tAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAg                                       <  1:3766773/93‑1 (MQ=255)

                                                   aaCGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGa                                      >  1:4597227/1‑93 (MQ=255)

                                                    aCGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGaa                                     >  2:3612417/1‑93 (MQ=255)

                                                    aCGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGaa                                     <  1:2842506/93‑1 (MQ=255)

                                                     cGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGaaa                                    <  2:3129893/93‑1 (MQ=255)

                                                      gAAAATCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAg                                   >  1:4530233/1‑93 (MQ=255)

                                                        aaaTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGa                                 >  2:5729648/1‑93 (MQ=255)

                                                        aaaTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGa                                 >  1:2174880/1‑93 (MQ=255)

                                                        aaaTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGa                                 >  1:4780161/1‑93 (MQ=255)

                                                         aaTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGaa                                >  2:1303486/1‑93 (MQ=255)

                                                          aTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGaaa                               <  2:3784396/93‑1 (MQ=255)

                                                          aTCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGaaa                               >  1:3239897/1‑93 (MQ=255)

                                                           tCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAAt                              <  2:4234637/93‑1 (MQ=255)

                                                           tCACCCGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAAt                              <  2:4463681/93‑1 (MQ=255)

                                                               ccGCTGCACGATGCGGTTAAGCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCa                          >  1:5441040/1‑93 (MQ=255)

                                                               ccGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCa                          >  1:4729436/1‑93 (MQ=255)

                                                                cGCTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAg                         <  1:618467/93‑1 (MQ=255)

                                                                  cTGCACGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGc                       >  2:6537349/1‑93 (MQ=255)

                                                                      aCGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCg                   >  2:2700001/1‑93 (MQ=255)

                                                                       cGATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCgg                  <  1:4071558/93‑1 (MQ=255)

                                                                        gATGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCggg                 >  2:5452206/1‑93 (MQ=255)

                                                                         aTGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGc                <  1:1522222/93‑1 (MQ=255)

                                                                         aTGCGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGc                <  2:1602448/93‑1 (MQ=255)

                                                                         aTGCGGTTAACCATCAAGCCAAAG‑TTAGACACAGCAGGGGCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCggggc               >  1:1111331/1‑91 (MQ=255)

                                                                            cGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCcac             <  1:361064/93‑1 (MQ=255)

                                                                            cGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCcac             <  1:3504687/93‑1 (MQ=255)

                                                                            cGGTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCcac             <  1:5606684/93‑1 (MQ=255)

                                                                             ggTTAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCcaca            <  2:6456288/93‑1 (MQ=255)

                                                                                tAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAAc         >  1:3957114/1‑93 (MQ=255)

                                                                                tAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAAc         >  1:2610810/1‑93 (MQ=255)

                                                                                tAACCATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAAc         <  1:5810418/93‑1 (MQ=255)

                                                                                   ccATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACttt      >  2:6681720/1‑93 (MQ=255)

                                                                                   ccATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACttt      <  2:209273/93‑1 (MQ=255)

                                                                                    cATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTc     <  2:4569684/93‑1 (MQ=255)

                                                                                    cATCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTc     >  1:636001/1‑93 (MQ=255)

                                                                                     accAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCAGGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCa    <  1:5942055/91‑1 (MQ=255)

                                                                                      tCAAGCCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCAt   <  1:415830/93‑1 (MQ=255)

GAAAAGACGCAGGACGGAAAGCAGCCCCTGCGTCAGGCCGTAGTAGCCAGTAACGAAAATCACCCGCTGCACGATGCGGTTAACCATCAAACCAAAGTTTAGCCACAGCAGGGTCATTAACCATGCGCTGCCGCTGAAAATAGAAAGGAAATGCCAGGCATCGGGCCACAAACTTTCATA  >  NC_000913/591076‑591255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`