BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	592,232	C→T	R57Q (CGA→CAA)	nfrB ←	NfrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	592,232	0	C	T	100.0%	811.4 / NA	216	R57Q (CGA→CAA)	nfrB	NfrB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (115/101); total (115/101)

Only 100 of 226 total aligned reads displayed.

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

atatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgc                                                                                         >  1:3283054/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  1:1345207/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  1:5407512/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        <  2:191254/93‑1 (MQ=255)

  atTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCgg                                                                                       <  1:1421268/93‑1 (MQ=255)

  atTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCgg                                                                                       <  1:4317970/93‑1 (MQ=255)

  atTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCgg                                                                                       <  1:5251145/93‑1 (MQ=255)

   ttGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCggg                                                                                      <  2:1626413/93‑1 (MQ=255)

    tGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGt                                                                                     <  2:3670801/93‑1 (MQ=255)

     gCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTa                                                                                    <  1:827648/93‑1 (MQ=255)

     gCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTa                                                                                    <  1:4234863/93‑1 (MQ=255)

      ccGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAg                                                                                   <  2:5888700/93‑1 (MQ=255)

        gATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcg                                                                                 <  1:1271626/93‑1 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  1:1769594/1‑93 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  1:4766474/1‑93 (MQ=255)

          tGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcggc                                                                               >  2:5895733/1‑93 (MQ=255)

              gCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           <  1:6585399/93‑1 (MQ=255)

              gCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           <  2:1264804/93‑1 (MQ=255)

              ccccGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           <  2:5461722/92‑1 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  1:2227482/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  1:5069037/1‑93 (MQ=255)

                       aTTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACAGTCaa                                                                  <  1:3033948/93‑1 (MQ=255)

                       aTTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCaa                                                                  >  2:951968/1‑93 (MQ=255)

                       aTTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCaa                                                                  >  1:469708/1‑93 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 >  1:4848732/1‑93 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               <  2:4043651/93‑1 (MQ=255)

                           cACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTg                                                              >  2:2299553/1‑93 (MQ=255)

                             cGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCg                                                            <  2:2420888/93‑1 (MQ=255)

                             cGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCg                                                            <  1:168652/93‑1 (MQ=255)

                             cGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCg                                                            >  2:6527512/1‑93 (MQ=255)

                              gCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGt                                                           <  2:1529886/93‑1 (MQ=255)

                               ccGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGtt                                                          <  2:5869009/93‑1 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTa                                                        >  2:6019448/1‑93 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTa                                                        >  2:1464389/1‑93 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTa                                                        >  2:1328006/1‑93 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGGTTa                                                        >  1:2629763/1‑93 (MQ=255)

                                  gAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTaa                                                       >  1:4998364/1‑93 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      >  1:742185/1‑93 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      >  1:5029018/1‑93 (MQ=255)

                                    aCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATg                                                     <  1:3159051/93‑1 (MQ=255)

                                    aCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATg                                                     <  2:3085482/93‑1 (MQ=255)

                                    aCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATg                                                     <  2:4634951/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:4298939/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    >  1:1615642/1‑93 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    >  2:1768209/1‑93 (MQ=255)

                                      cATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcg                                                   >  2:861042/1‑93 (MQ=255)

                                       aTAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcgg                                                  >  1:3698666/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  1:5680338/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  2:3026251/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 <  1:6656665/93‑1 (MQ=255)

                                         aaTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggcg                                                >  1:1533656/1‑93 (MQ=255)

                                         aaTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggcg                                                >  2:1992316/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               >  2:738733/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               <  1:2836517/93‑1 (MQ=255)

                                             gCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAcc                                            >  2:2770349/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  2:1843913/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  1:2266004/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  1:2693318/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  1:2406710/1‑93 (MQ=255)

                                                aaCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAg                                         >  2:3834162/1‑93 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        >  2:6587471/1‑93 (MQ=255)

                                                    gTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAga                                     >  1:5361695/1‑93 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    <  2:1104404/93‑1 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    <  2:219115/93‑1 (MQ=255)

                                                       tttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgacga                                  >  2:6154625/1‑93 (MQ=255)

                                                          cATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAt                               <  1:5947526/93‑1 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  1:3508010/1‑93 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  1:2125302/1‑93 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              <  2:2734511/93‑1 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  2:5665471/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:396174/1‑93 (MQ=255)

                                                             cTGGTTTAAACAGTTCGCGCTAACTCATTTGCGGGTGGCGGCGATAAACACTCAACTTGCGTTTAATGCCGCGTACCCAGTAGACGACATCaa                            <  1:4789834/93‑1 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAt                               >  1:4114430/1‑89 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAt                               <  2:4114430/89‑1 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           >  1:3548182/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  2:4979690/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  2:2841972/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      >  1:4459340/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  2:5313513/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  2:2158826/1‑93 (MQ=255)

                                                                      aCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAAt                   <  1:243074/93‑1 (MQ=255)

                                                                        aGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCg                 >  2:5354513/1‑93 (MQ=255)

                                                                        aGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCg                 >  2:4424372/1‑93 (MQ=255)

                                                                          ttCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTc               <  1:632585/93‑1 (MQ=255)

                                                                          ttCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTc               <  1:5626900/93‑1 (MQ=255)

                                                                              cgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGc           >  1:5236981/1‑93 (MQ=255)

                                                                              cgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGc           <  1:6096573/93‑1 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          <  1:4589442/93‑1 (MQ=255)

                                                                                 tAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCg        <  1:3375767/93‑1 (MQ=255)

                                                                                  aaCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGc       <  2:345020/93‑1 (MQ=255)

                                                                                  aaCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGc       <  1:4157286/93‑1 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      >  1:5876556/1‑93 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      <  2:4548192/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    >  1:1056015/1‑93 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    <  2:1694851/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    <  1:2010075/93‑1 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   <  2:2809183/93‑1 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   <  1:425179/93‑1 (MQ=255)

                                                                                       aTTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgatg  <  1:6282624/93‑1 (MQ=255)

                                                                                       aTTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgatg  <  2:1858209/93‑1 (MQ=255)

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`