BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,428,092	A→G	G217G (GGA→GGG)	cycA →	transport of D‑alanine, D‑serine, and glycine

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,428,092	0	A	G	100.0%	742.5 / NA	227	G217G (GGA→GGG)	cycA	transport of D‑alanine, D‑serine, and glycine
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/109); total (118/109)

Only 100 of 231 total aligned reads displayed.

TTCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACG  >  NC_000913/4428001‑4428181

ttCAGTCACCGCCTGGTGTGGAAGCGTCTTCCGCGCATTTGTGGAATGACGGGGGCT‑GTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGtt                                                                                         <  2:2017946/93‑1 (MQ=255)

 tCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGtt                                                                                         <  1:5505510/93‑1 (MQ=255)

 tCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGtt                                                                                         <  1:2534907/93‑1 (MQ=255)

  cAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTc                                                                                        <  2:3401602/93‑1 (MQ=255)

    gTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCa                                                                                      >  1:718327/1‑93 (MQ=255)

       aCCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGAt                                                                                   >  2:3869267/1‑93 (MQ=255)

        ccGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATa                                                                                  >  2:2336772/1‑93 (MQ=255)

          gACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAgg                                                                                >  1:3115822/1‑92 (MQ=255)

          gACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGc                                                                                >  1:4227951/1‑93 (MQ=255)

          gACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGc                                                                                <  1:2822128/93‑1 (MQ=255)

          gACGGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGc                                                                                <  1:1127579/93‑1 (MQ=255)

           aCTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCg                                                                               >  1:1231777/1‑93 (MQ=255)

           aCTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCg                                                                               <  2:3463726/93‑1 (MQ=255)

             tGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGt                                                                             >  1:1901563/1‑93 (MQ=255)

              ggTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGtt                                                                            <  1:3859301/93‑1 (MQ=255)

              ggTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGtt                                                                            >  2:2432997/1‑93 (MQ=255)

                tgtgGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATTGCGGtttt                                                                          <  1:6561377/93‑1 (MQ=255)

                 gtgGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTc                                                                         >  1:4294729/1‑93 (MQ=255)

                  tgGAAGAGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGGGGGTTTCg                                                                        >  1:2192561/1‑93 (MQ=255)

                   ggAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGc                                                                       <  2:1197865/93‑1 (MQ=255)

                   ggAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGc                                                                       >  1:5057493/1‑93 (MQ=255)

                   ggAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGc                                                                       >  2:5683143/1‑93 (MQ=255)

                      aGCGTCATTCGCGCAGTTGTGGAATGACGGAGGCTGGTTCCCGAAAGGTTTAAGGGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCttt                                                                    <  1:1877864/93‑1 (MQ=255)

                        cGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCg                                                                  <  2:73660/93‑1 (MQ=255)

                          tCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTg                                                                <  1:2161618/93‑1 (MQ=255)

                          tCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCCTg                                                                <  2:4136013/93‑1 (MQ=255)

                            aTTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGGTTTCGTggg                                                              >  1:1732597/1‑93 (MQ=255)

                            aTTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTggg                                                              <  1:3557206/93‑1 (MQ=255)

                            aTTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTggg                                                              <  2:5649326/93‑1 (MQ=255)

                            aTTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTggg                                                              >  2:2175159/1‑93 (MQ=255)

                            aTTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTggg                                                              >  1:906271/1‑93 (MQ=255)

                             ttCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTgggg                                                             <  2:6216080/93‑1 (MQ=255)

                                gcgcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGAtt                                                          >  2:1487316/1‑93 (MQ=255)

                                 cgcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTg                                                         >  2:5844155/1‑93 (MQ=255)

                                  gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  2:6384144/93‑1 (MQ=255)

                                  gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  1:5153202/93‑1 (MQ=255)

                                  gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        >  1:6360363/1‑93 (MQ=255)

                                  gcATTTGTGGAATCACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  2:3798908/93‑1 (MQ=255)

                                  caaTTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTGCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  1:647805/91‑1 (MQ=255)

                                    aTTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGc                                                      >  1:2503992/1‑93 (MQ=255)

                                     tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     <  2:6480800/93‑1 (MQ=255)

                                      ttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTg                                                    <  1:3331674/93‑1 (MQ=255)

                                      ttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTg                                                    <  2:4883298/93‑1 (MQ=255)

                                        gtgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggt                                                  <  2:4337511/93‑1 (MQ=255)

                                         tgGAATGACGGGGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggta                                                 <  2:4495854/93‑1 (MQ=255)

                                         tgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggta                                                 <  1:3636706/93‑1 (MQ=255)

                                          ggAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggtag                                                <  1:6712310/93‑1 (MQ=255)

                                           gAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGCTTTCGCTTTCGTGGGGATTGAGCTggtagg                                               >  2:5979641/1‑93 (MQ=255)

                                             aTGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggtaggta                                             >  2:5248645/1‑93 (MQ=255)

                                             aTGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggtaggta                                             <  2:5134200/93‑1 (MQ=255)

                                              tGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTac                                            >  1:3455774/1‑93 (MQ=255)

                                              tGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTac                                            <  2:1764691/93‑1 (MQ=255)

                                                aCGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaa                                          >  1:4025242/1‑93 (MQ=255)

                                                 cggcggCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaac                                         <  1:4092353/93‑1 (MQ=255)

                                                 cggcggCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaac                                         >  1:10712/1‑93 (MQ=255)

                                                  ggcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaaca                                        >  1:6048048/1‑93 (MQ=255)

                                                  ggcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaaca                                        >  2:4618496/1‑93 (MQ=255)

                                                  ggcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaaca                                        <  2:4283056/93‑1 (MQ=255)

                                                  ggcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaaca                                        <  2:3267366/93‑1 (MQ=255)

                                                    cggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGc                                      <  1:1172108/93‑1 (MQ=255)

                                                      gcTGTTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTCTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTg                                    <  1:5435328/93‑1 (MQ=255)

                                                      gcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTg                                    >  1:4319314/1‑93 (MQ=255)

                                                        tGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCg                                  >  2:5585976/1‑93 (MQ=255)

                                                         ggTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCgg                                 >  1:5218028/1‑93 (MQ=255)

                                                         ggTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCgg                                 >  1:2982856/1‑93 (MQ=255)

                                                          gTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGa                                <  2:2281644/93‑1 (MQ=255)

                                                          gTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGa                                >  1:611018/1‑93 (MQ=255)

                                                            tCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGaaa                              >  1:41131/1‑93 (MQ=255)

                                                             cccGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAAc                             <  2:616090/93‑1 (MQ=255)

                                                             cccGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAAc                             <  2:1093037/93‑1 (MQ=255)

                                                              ccGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAAcc                            <  2:6298593/93‑1 (MQ=255)

                                                              ccGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAAcc                            >  1:2351685/1‑93 (MQ=255)

                                                               cGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCa                           <  2:2387752/93‑1 (MQ=255)

                                                               cGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCa                           >  1:2262231/1‑93 (MQ=255)

                                                               cGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCa                           >  2:3589138/1‑93 (MQ=255)

                                                                gAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCaa                          >  1:4456961/1‑93 (MQ=255)

                                                                gAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCaa                          >  1:4581776/1‑93 (MQ=255)

                                                                   aGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGa                       >  1:2773753/1‑93 (MQ=255)

                                                                     gTTTAAGTGGCTTCTTTGCCGGGGTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGCAGGTACAACAGCTGCGGAAACCAAAGATc                     >  1:2063489/1‑93 (MQ=255)

                                                                      tttAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGAttc                    >  2:2640509/1‑91 (MQ=255)

                                                                       ttAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCa                   <  1:3199051/93‑1 (MQ=255)

                                                                         aaGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCaga                 <  2:2587946/93‑1 (MQ=255)

                                                                         aaGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCaga                 <  1:5340800/93‑1 (MQ=255)

                                                                         aaGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTAGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCaga                 >  1:161497/1‑93 (MQ=255)

                                                                          aGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCagag                >  1:4648886/1‑93 (MQ=255)

                                                                            tGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGaa              <  2:5020396/93‑1 (MQ=255)

                                                                            tGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGaa              >  2:1296809/1‑93 (MQ=255)

                                                                              gCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGAACCAGAGAAAt            >  1:1505502/1‑93 (MQ=255)

                                                                               cttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATc           >  2:1356316/1‑93 (MQ=255)

                                                                               cttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATc           >  1:3956888/1‑93 (MQ=255)

                                                                                ttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCa          >  1:6419357/1‑93 (MQ=255)

                                                                                ttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCa          >  2:4656807/1‑93 (MQ=255)

                                                                                ttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCa          >  2:6085094/1‑93 (MQ=255)

                                                                                 tcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCAc         >  1:5466424/1‑93 (MQ=255)

                                                                                  cttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACt        <  1:1308726/93‑1 (MQ=255)

                                                                                     tGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGcc     >  2:302252/1‑93 (MQ=255)

                                                                                     tGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGcc     <  1:2654706/93‑1 (MQ=255)

                                                                                      gCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGCAATCACTGCCa    >  2:1407869/1‑93 (MQ=255)

                                                                                      gCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCa    >  2:2067052/1‑93 (MQ=255)

                                                                                      gCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCa    >  1:3803909/1‑93 (MQ=255)

TTCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACG  >  NC_000913/4428001‑4428181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`