BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,478,520	C→T	intergenic (+29/+30)	yjgN → / ← valS	hypothetical protein/valine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,478,520	0	C	T	100.0%	1121.1 / NA	296	intergenic (+29/+30)	yjgN/valS	hypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (170/126); total (170/126)

Only 100 of 303 total aligned reads displayed.

CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT  >  NC_000913/4478429‑4478610

ccAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGc                                                                                         >  1:6140981/1‑93 (MQ=255)

ccAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGc                                                                                         >  1:2030938/1‑93 (MQ=255)

 cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGcc                                                                                        <  1:3743491/93‑1 (MQ=255)

 cAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGcc                                                                                        >  2:5614482/1‑93 (MQ=255)

  aGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCt                                                                                       <  2:1814978/93‑1 (MQ=255)

  aGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCt                                                                                       >  1:964586/1‑93 (MQ=255)

   gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                                      <  1:5421976/93‑1 (MQ=255)

   gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                                      <  1:432034/93‑1 (MQ=255)

   gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCtt                                                                                      >  2:5804805/1‑93 (MQ=255)

    aTAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttc                                                                                     >  2:1950994/1‑92 (MQ=255)

     tAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcg                                                                                    <  2:3426785/93‑3 (MQ=255)

      aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt                                                                                   >  1:1230930/1‑90 (MQ=255)

      aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgt                                                                                   >  2:1486539/1‑90 (MQ=255)

       aaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCttcgtt                                                                                  >  2:3707038/1‑89 (MQ=255)

        aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGttt                                                                                <  1:4135522/93‑1 (MQ=255)

         ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                               >  1:2774825/1‑93 (MQ=255)

         ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                               >  2:243042/1‑93 (MQ=255)

         ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                               >  2:3530504/1‑93 (MQ=255)

         ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                               >  1:2391870/1‑93 (MQ=255)

         ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGtttt                                                                               >  1:4250759/1‑93 (MQ=255)

            ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                            >  2:1078696/1‑93 (MQ=255)

            ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                            <  2:2072951/93‑1 (MQ=255)

            ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                            >  1:1526485/1‑93 (MQ=255)

            ttcttAGACAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGTCGGA‑GCATGCTCTGGCCTT‑CGTTTtcat                                                                            >  1:4204764/1‑93 (MQ=255)

             tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc                                                                           >  2:2969453/1‑93 (MQ=255)

             tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatc                                                                           <  1:1036076/93‑1 (MQ=255)

              cttAGCCAGTATTTCACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTtcatca                                                                          <  1:2289376/93‑1 (MQ=255)

               ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCAc                                                                         >  2:5995220/1‑93 (MQ=255)

                  gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt                                                                      >  2:5923936/1‑93 (MQ=255)

                  gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACtgt                                                                      >  1:6273227/1‑93 (MQ=255)

                    cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTgtgt                                                                    <  1:1903547/93‑1 (MQ=255)

                      gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGttt                                                                  <  2:2343501/93‑1 (MQ=255)

                       tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt                                                                 >  2:505801/1‑93 (MQ=255)

                       tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGtttt                                                                 <  1:475724/93‑1 (MQ=255)

                          ttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAt                                                              <  1:3229965/93‑1 (MQ=255)

                           tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt                                                             <  1:1175338/93‑1 (MQ=255)

                           tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGAtt                                                             <  2:3495922/93‑1 (MQ=255)

                               ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAg                                                         >  2:3461802/1‑93 (MQ=255)

                                gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc                                                        <  2:6703139/93‑1 (MQ=255)

                                gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgc                                                        <  1:3435876/93‑1 (MQ=255)

                                  gAGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAgcgc                                                      >  2:1722957/1‑93 (MQ=255)

                                   aGTTATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGcgcg                                                     >  2:6459067/1‑93 (MQ=255)

                                     ttATGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                   >  2:4124992/1‑93 (MQ=255)

                                       aTGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                                                 <  1:5720089/93‑1 (MQ=255)

                                        tGCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt                                                >  2:4557870/1‑93 (MQ=255)

                                         gCCTTCTTTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                               >  1:6697421/1‑93 (MQ=255)

                                           cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                             <  2:5112968/93‑1 (MQ=255)

                                           cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                             >  2:5270469/1‑93 (MQ=255)

                                           cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                             >  2:2555870/1‑93 (MQ=255)

                                           cttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                             >  1:4419308/1‑93 (MQ=255)

                                            ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                            <  2:6176378/93‑1 (MQ=255)

                                            ttcttTACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                            >  1:5194591/1‑93 (MQ=255)

                                                ttACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                                        <  2:1645746/93‑1 (MQ=255)

                                                 tACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg                                       <  1:2890088/93‑1 (MQ=255)

                                                 tACCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctg                                       >  2:3579016/1‑93 (MQ=255)

                                                  aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc                                      <  2:801186/93‑1 (MQ=255)

                                                  aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc                                      <  2:5581045/93‑1 (MQ=255)

                                                  aCCATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc                                      >  1:1480194/1‑93 (MQ=255)

                                                   ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                                     >  2:4917388/1‑93 (MQ=255)

                                                   ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                                     <  2:1233919/93‑1 (MQ=255)

                                                   ccATTTCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                                     >  2:4513868/1‑93 (MQ=255)

                                                      tttCTGTAAGAGATAAAAAAA‑GCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                  <  2:3152633/93‑1 (MQ=255)

                                                      tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                  <  1:65745/93‑1 (MQ=255)

                                                      tttCTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                  >  1:1796753/1‑93 (MQ=255)

                                                         cTGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa                               >  2:4370876/1‑93 (MQ=255)

                                                          tGTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt                              <  2:4852822/93‑1 (MQ=255)

                                                           gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                             >  1:1713920/1‑93 (MQ=255)

                                                           gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                             <  2:5953306/93‑1 (MQ=255)

                                                           gTAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                             >  2:405038/1‑93 (MQ=255)

                                                            tAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa                            <  2:3056643/93‑1 (MQ=255)

                                                            tAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa                            <  1:4998670/93‑1 (MQ=255)

                                                            tAAGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa                            <  1:3372050/93‑1 (MQ=255)

                                                             aaGAGAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                           >  1:213387/1‑93 (MQ=255)

                                                              agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt                          >  1:2599913/1‑93 (MQ=255)

                                                              agagAT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt                          >  1:5871502/1‑93 (MQ=255)

                                                               gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                         <  1:5315309/93‑1 (MQ=255)

                                                               gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                         >  2:4235901/1‑93 (MQ=255)

                                                               gagaT‑AAAAAAGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                         >  2:4890608/1‑93 (MQ=255)

                                                                 agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                        <  2:3847904/89‑1 (MQ=255)

                                                                 agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                        <  1:1312826/89‑1 (MQ=255)

                                                                 agataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                        >  2:3789550/5‑93 (MQ=255)

                                                                   ataaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcg                      <  2:4347422/91‑1 (MQ=255)

                                                                    taaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgc                     >  1:3586960/2‑93 (MQ=255)

                                                                     aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                    >  2:1309280/1‑93 (MQ=255)

                                                                     aaaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                    >  1:4729671/1‑93 (MQ=255)

                                                                      aaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt                   <  2:6661387/93‑1 (MQ=255)

                                                                      aaaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt                   >  1:5621140/1‑93 (MQ=255)

                                                                       aaaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                  <  2:5503922/93‑1 (MQ=255)

                                                                        aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                 <  1:3958196/93‑1 (MQ=255)

                                                                        aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                 >  1:5013323/1‑93 (MQ=255)

                                                                        aaaGGCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                 <  1:6030055/93‑1 (MQ=255)

                                                                           ggCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct              <  2:3915897/93‑1 (MQ=255)

                                                                           ggCCGGA‑GCATGCTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATAAGTttcgctttcgct              >  1:2059737/1‑93 (MQ=255)

                                                                                ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg          <  1:836067/90‑1 (MQ=255)

                                                                                ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg          <  1:6467823/90‑1 (MQ=255)

                                                                                ggagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg          >  1:3322773/4‑93 (MQ=255)

                                                                                 gagcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc         >  1:5057395/3‑93 (MQ=255)

                                                                                  agcatgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCa        <  1:2512825/92‑1 (MQ=255)

                                                                                     atgcTCTGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAg     <  1:3043219/93‑1 (MQ=255)

                                                                                        ctctGGCCTT‑CGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCt  <  1:3305520/93‑1 (MQ=255)

CCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT  >  NC_000913/4478429‑4478610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`