BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,555,020	A→G	M280T (ATG→ACG)	yjiE ←	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,555,020	0	A	G	100.0%	983.9 / NA	297	M280T (ATG→ACG)	yjiE	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (147/150); total (147/150)

Only 100 of 305 total aligned reads displayed.

TGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG  >  NC_000913/4554930‑4555109

tGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTc                                                                                         <  2:3702239/93‑1 (MQ=255)

 gCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTcc                                                                                        <  2:5513534/93‑1 (MQ=255)

 gCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTcc                                                                                        <  1:6319513/93‑1 (MQ=255)

   gACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGGATTCGGCCgg                                                                                      >  1:5912769/1‑93 (MQ=255)

    aCGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGt                                                                                     >  2:1167942/1‑93 (MQ=255)

        tgaagaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGc                                                                                 <  2:4526948/90‑1 (MQ=255)

         ggAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCa                                                                                <  1:4934176/93‑1 (MQ=255)

           agaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATa                                                                              >  1:2833436/1‑93 (MQ=255)

           agaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATa                                                                              <  1:4873603/93‑1 (MQ=255)

            gaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAg                                                                             >  1:4108279/1‑93 (MQ=255)

            gaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAg                                                                             <  1:2889135/93‑1 (MQ=255)

            gaATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAg                                                                             <  1:4998704/93‑1 (MQ=255)

             aaTGTCAGCTAAGCACACTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAgg                                                                            <  2:2610465/93‑1 (MQ=255)

             aaTGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAgg                                                                            >  1:4816247/1‑93 (MQ=255)

              aTGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGc                                                                           >  2:322623/1‑93 (MQ=255)

               tGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGcc                                                                          <  2:3078613/93‑1 (MQ=255)

                gTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCt                                                                         <  2:490077/93‑1 (MQ=255)

                gTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCt                                                                         >  2:6264992/1‑93 (MQ=255)

                   aGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGaa                                                                      <  1:4678909/93‑1 (MQ=255)

                   aGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGaa                                                                      <  2:2502309/93‑1 (MQ=255)

                   aGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGaa                                                                      <  2:3364383/93‑1 (MQ=255)

                   aGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGaa                                                                      <  2:8950/93‑1 (MQ=255)

                     cTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATc                                                                    <  2:6182500/93‑1 (MQ=255)

                      tAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCg                                                                   >  1:64846/1‑93 (MQ=255)

                       aaGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCgg                                                                  <  2:3828250/93‑1 (MQ=255)

                       aaGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCgg                                                                  <  2:5403032/93‑1 (MQ=255)

                       aaGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCgg                                                                  >  1:314348/1‑93 (MQ=255)

                       aaGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCCGCAACGGGATTCATGCGGGTATTCGTCCGGTCTGCATACGCCTGAATAgg                                                                  >  1:1994515/1‑93 (MQ=255)

                        aGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCggg                                                                 >  2:3544738/1‑93 (MQ=255)

                         gCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGa                                                                >  1:1002311/1‑93 (MQ=255)

                            caATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCa                                                             >  2:326458/1‑93 (MQ=255)

                            caATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCa                                                             >  1:1548002/1‑93 (MQ=255)

                             aaTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAc                                                            >  2:630073/1‑93 (MQ=255)

                              aTCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAcc                                                           >  2:190503/1‑93 (MQ=255)

                               tctcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCa                                                          >  1:4342489/1‑93 (MQ=255)

                               tctcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCa                                                          >  2:2189585/1‑93 (MQ=255)

                               tctcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCa                                                          <  1:3397632/93‑1 (MQ=255)

                               tctcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCa                                                          >  2:6009893/1‑93 (MQ=255)

                                 tcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGt                                                        <  1:15884/93‑1 (MQ=255)

                                 tcCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGt                                                        <  2:75496/93‑1 (MQ=255)

                                 tcCAGATCGAGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAACCGGGATCACCAGt                                                        <  1:1443547/93‑1 (MQ=255)

                                  ccAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGtt                                                       <  1:253249/93‑1 (MQ=255)

                                  ccAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGtt                                                       <  2:4192240/93‑1 (MQ=255)

                                   cAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTc                                                      <  2:6477947/93‑1 (MQ=255)

                                   cAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGGATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTc                                                      >  2:5618870/1‑93 (MQ=255)

                                    aGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCg                                                     >  1:2994253/1‑93 (MQ=255)

                                    aGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCAACAGTTCg                                                     >  2:1456458/1‑93 (MQ=255)

                                     gCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATGCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGt                                                    >  2:4817530/1‑93 (MQ=255)

                                       tCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTcc                                                  >  1:1213955/1‑93 (MQ=255)

                                        cgcgCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTccc                                                 >  1:2292880/1‑93 (MQ=255)

                                         gcgcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCg                                                >  1:722572/1‑93 (MQ=255)

                                          cgcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGa                                               <  2:4049925/93‑1 (MQ=255)

                                           gcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAt                                              >  1:4014868/1‑93 (MQ=255)

                                           gcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAt                                              <  2:1399395/93‑1 (MQ=255)

                                           gcAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTAGTCCCGAt                                              <  1:6524959/93‑1 (MQ=255)

                                            cAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGAtt                                             <  2:57880/93‑1 (MQ=255)

                                             aGTTCGCGCCAGAAGCGTGCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTc                                            <  1:461717/93‑1 (MQ=255)

                                             aGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTc                                            <  1:3358099/93‑1 (MQ=255)

                                             aGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTc                                            <  1:5638803/93‑1 (MQ=255)

                                              gTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCa                                           >  1:4741925/1‑93 (MQ=255)

                                              gTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCa                                           <  2:2376331/93‑1 (MQ=255)

                                              gTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCa                                           <  2:6345487/93‑1 (MQ=255)

                                               ttCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAg                                          >  2:5146160/1‑93 (MQ=255)

                                                 cACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTa                                        <  2:2051430/93‑1 (MQ=255)

                                                 cACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTa                                        <  2:5912373/93‑1 (MQ=255)

                                                    gCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACaa                                     <  2:3459068/93‑1 (MQ=255)

                                                     cccgAAGCGTTCGGCAACGGGATTTATGCGTGTGTTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTCCGTCCCGATTCAGTACAAc                                    <  1:5266567/90‑1 (MQ=255)

                                                     ccAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAc                                    <  2:4285827/93‑1 (MQ=255)

                                                     ccAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAc                                    <  1:619632/93‑1 (MQ=255)

                                                     ccAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAc                                    <  2:2724556/93‑1 (MQ=255)

                                                     ccAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAc                                    >  1:3922824/1‑93 (MQ=255)

                                                       aGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAAcca                                  <  1:4205492/93‑3 (MQ=255)

                                                       aGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGa                                  >  1:5470742/1‑93 (MQ=255)

                                                       aGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGa                                  >  1:3733799/1‑93 (MQ=255)

                                                          aGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCt                               <  2:3421553/93‑1 (MQ=255)

                                                          aGCGTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCt                               <  2:5706796/93‑1 (MQ=255)

                                                             gTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTcc                            >  2:2137432/1‑93 (MQ=255)

                                                             gTTCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTcc                            >  1:1821962/1‑93 (MQ=255)

                                                               tCGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCg                          >  1:3776663/1‑93 (MQ=255)

                                                                cGGCAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGc                         <  1:117240/93‑1 (MQ=255)

                                                                   cAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGc                      >  1:813988/1‑93 (MQ=255)

                                                                   cAACGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGc                      <  1:6609412/93‑1 (MQ=255)

                                                                    aagtggATTCGTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCg                     <  2:5296907/89‑1 (MQ=255)

                                                                    aaCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCg                     >  2:6566614/1‑93 (MQ=255)

                                                                    aaCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCg                     >  1:2652037/1‑93 (MQ=255)

                                                                    aaCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCg                     >  1:3794735/1‑93 (MQ=255)

                                                                    aaCGGGATTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCg                     >  1:575824/1‑93 (MQ=255)

                                                                          aTTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTc               <  1:2390369/93‑1 (MQ=255)

                                                                          aTTCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTc               <  1:930403/93‑1 (MQ=255)

                                                                           ttCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCt              <  1:5999870/93‑1 (MQ=255)

                                                                           ttCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCt              <  1:210763/93‑1 (MQ=255)

                                                                            tCATGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCtt             <  1:865579/93‑1 (MQ=255)

                                                                              aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           >  1:6073230/1‑93 (MQ=255)

                                                                              aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           >  2:6419514/1‑93 (MQ=255)

                                                                              aTGCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgt           >  2:2880437/1‑93 (MQ=255)

                                                                                gCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgttg         <  2:1282189/93‑1 (MQ=255)

                                                                                gCGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCttgttg         <  2:2837076/93‑1 (MQ=255)

                                                                                 cGGGTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTgg        >  1:5129817/1‑93 (MQ=255)

                                                                                   ggTATTCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGAt      >  1:347810/1‑93 (MQ=255)

                                                                                       ttCGTCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCg  >  2:3911211/1‑93 (MQ=255)

TGCGACGCTGGAGAATGTCAGCTAAGCACAATCTCCAGCTCGCGCAGTTCACGCCAGAAGCGTTCGGCAACGGGATTCATGCGGGTATTCATCCGGTATGCATAGGCCTGAATCGGGATCACCAGTTCGTCCCGATTCAGTACAACGAGCTTCCCGCTGCGAATTTCTTGTTGGATGGCG  >  NC_000913/4554930‑4555109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`