BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,625,205	T→C	L108L (TTG→CTG)	nadR →	NadR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,625,205	0	T	C	99.6%	773.7 / ‑5.2	237	L108L (TTG→CTG)	nadR	NadR
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (98/138); total (98/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 260 total aligned reads displayed.

ACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATT  >  NC_000913/4625115‑4625294

  cGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgctgtt                                                                                       <  1:1303878/93‑1 (MQ=255)

  cGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgctgtt                                                                                       <  1:711455/93‑1 (MQ=255)

  cGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCgctgtt                                                                                       <  1:2211361/93‑1 (MQ=255)

     aCATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACGACGCGCTGTTCGa                                                                                    >  1:1189296/1‑93 (MQ=255)

      cATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGaa                                                                                   >  1:3272023/1‑93 (MQ=255)

       atatCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAg                                                                                  >  2:6540784/1‑93 (MQ=255)

        tatCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGa                                                                                 <  2:394254/93‑1 (MQ=255)

        tatCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGa                                                                                 >  1:4153824/1‑93 (MQ=255)

        tatCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGa                                                                                 >  2:2830162/1‑93 (MQ=255)

         atCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGAc                                                                                <  2:5180905/93‑1 (MQ=255)

         atCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGAc                                                                                >  2:1343958/1‑93 (MQ=255)

         atCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGAc                                                                                >  1:6260017/1‑93 (MQ=255)

           cTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAg                                                                              <  2:2672149/93‑1 (MQ=255)

            tACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGt                                                                             <  2:34765/93‑1 (MQ=255)

             aCCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTg                                                                            >  1:6219957/1‑93 (MQ=255)

               cTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGcc                                                                          <  1:5457447/93‑1 (MQ=255)

                ttATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCa                                                                         >  1:3132975/1‑93 (MQ=255)

                ttATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCa                                                                         >  2:1617582/1‑93 (MQ=255)

                ttATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCa                                                                         >  2:580960/1‑93 (MQ=255)

                 tATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCAt                                                                        >  1:2356731/1‑93 (MQ=255)

                 tATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCAt                                                                        <  2:1748212/93‑1 (MQ=255)

                  aTCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATg                                                                       <  2:6170154/93‑1 (MQ=255)

                  aTCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATg                                                                       <  2:6062074/93‑1 (MQ=255)

                   tCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGt                                                                      <  2:440075/93‑1 (MQ=255)

                    ccAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTc                                                                     <  2:3340034/93‑1 (MQ=255)

                      aGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCgc                                                                   >  1:6191086/1‑93 (MQ=255)

                         gcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCgcagc                                                                <  1:364079/93‑1 (MQ=255)

                          cgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCgcagca                                                               >  1:2007126/1‑93 (MQ=255)

                           gcCTGTAGCCAGGTTGACGAGCTTCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGcagcag                                                              >  1:3554286/1‑93 (MQ=255)

                            ccTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCagcagc                                                             <  1:1435961/93‑1 (MQ=255)

                                 aGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAcc                                                        >  2:5350415/1‑93 (MQ=255)

                                  gCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCg                                                       >  2:4504477/1‑93 (MQ=255)

                                   ccAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGt                                                      <  1:1028155/93‑1 (MQ=255)

                                     aGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGc                                                    >  2:5527604/1‑93 (MQ=255)

                                      ggTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGcc                                                   >  2:1045523/1‑93 (MQ=255)

                                        ttGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCgg                                                 >  2:6407771/1‑93 (MQ=255)

                                         tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGa                                                >  1:2203461/1‑93 (MQ=255)

                                          gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAt                                               <  2:4773684/93‑1 (MQ=255)

                                          gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAt                                               <  2:5233518/93‑1 (MQ=255)

                                          gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAt                                               <  1:3450696/93‑1 (MQ=255)

                                          gACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGAt                                               <  1:454753/93‑1 (MQ=255)

                                           aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATc                                              <  2:5622671/93‑1 (MQ=255)

                                             gAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGt                                            >  2:1513495/1‑93 (MQ=255)

                                                 tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGc                                        >  2:3249405/1‑93 (MQ=255)

                                                 tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGc                                        <  2:5731491/93‑1 (MQ=255)

                                                   cATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGt                                      <  2:2949054/93‑1 (MQ=255)

                                                   cATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGt                                      <  1:563559/93‑1 (MQ=255)

                                                   cATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGt                                      <  1:6139962/93‑1 (MQ=255)

                                                    atatCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGtt                                     >  1:4049818/1‑93 (MQ=255)

                                                    atatCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGACGGATCGTCTGCGtt                                     >  2:1481588/1‑93 (MQ=255)

                                                      atCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                   <  2:3757686/93‑1 (MQ=255)

                                                       tCATTATGGGTTTTGACGATACGCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCCTCTGCGTTGGt                                  <  2:872307/93‑1 (MQ=255)

                                                       tCATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                  >  1:2573748/1‑93 (MQ=255)

                                                        cATTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                 <  1:1785424/93‑1 (MQ=255)

                                                         aTTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                <  2:689045/93‑1 (MQ=255)

                                                         aTTATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                <  2:1952073/93‑1 (MQ=255)

                                                           tATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                              <  1:4024463/93‑1 (MQ=255)

                                                           tATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                              <  1:5764312/93‑1 (MQ=255)

                                                           tATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                              <  2:4129389/93‑1 (MQ=255)

                                                           tATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                              <  1:3400879/93‑1 (MQ=255)

                                                           tATGGGTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                              <  1:5977050/93‑1 (MQ=255)

                                                              gggTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGCTCGTCTGCGTTGGGTATTGCa                           >  1:4830796/1‑93 (MQ=255)

                                                              gggTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCa                           >  2:737017/1‑93 (MQ=255)

                                                               ggTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                          >  2:4931787/1‑93 (MQ=255)

                                                               ggTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                          <  1:4698192/93‑1 (MQ=255)

                                                               ggTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                          <  1:6707252/93‑1 (MQ=255)

                                                                gTTTTGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                         >  2:22452/1‑93 (MQ=255)

                                                                 ttttGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCacac                        >  1:2938304/1‑93 (MQ=255)

                                                                 ttttGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAAc                        <  2:1243499/93‑1 (MQ=255)

                                                                  tttGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACt                       <  1:1919023/93‑1 (MQ=255)

                                                                   ttGACGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                      <  1:5891328/93‑1 (MQ=255)

                                                                       cGATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                  >  2:2062776/1‑93 (MQ=255)

                                                                        gATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                 >  1:5694139/1‑93 (MQ=255)

                                                                        gATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                 >  1:2055056/1‑93 (MQ=255)

                                                                        gATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                 >  2:5539898/1‑93 (MQ=255)

                                                                        gATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                 <  1:2967059/93‑1 (MQ=255)

                                                                        gATACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaaa                 >  2:5929913/1‑93 (MQ=255)

                                                                         aTACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                <  1:10985/93‑1 (MQ=255)

                                                                         aTACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                <  2:4254164/93‑1 (MQ=255)

                                                                          tACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata               <  2:500732/93‑1 (MQ=255)

                                                                          tACCCGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata               >  2:1693334/1‑93 (MQ=255)

                                                                            cccGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc             >  2:4580759/1‑93 (MQ=255)

                                                                            cccGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc             <  1:5260009/93‑1 (MQ=255)

                                                                            cccGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc             <  1:602409/93‑1 (MQ=255)

                                                                             ccGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa            <  1:4606977/93‑1 (MQ=255)

                                                                              cGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAg           <  1:2268978/93‑1 (MQ=255)

                                                                              cGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAg           >  2:2997068/1‑93 (MQ=255)

                                                                              cGTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTCCGGTGGTTATTGCAAACTTTTGAATATCAg           >  2:6330741/1‑93 (MQ=255)

                                                                               gTGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGa          <  1:3572735/93‑1 (MQ=255)

                                                                                tGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaa         <  1:471003/93‑1 (MQ=255)

                                                                                tGACCGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaa         <  1:2406039/93‑1 (MQ=255)

                                                                                   ccGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa      <  2:1796002/93‑1 (MQ=255)

                                                                                   ccGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa      <  2:2360108/93‑1 (MQ=255)

                                                                                   ccGCGCGCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa      <  2:2452549/93‑1 (MQ=255)

                                                                                     gcgcgcTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata    <  2:1648792/93‑1 (MQ=255)

                                                                                      cgcgCTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat   >  2:3318296/1‑93 (MQ=255)

                                                                                       gcgcTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATAtt  <  2:5690617/93‑1 (MQ=255)

                                                                                       gcgcTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATAtt  <  2:1450881/93‑1 (MQ=255)

                                                                                       gcgcTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATAtt  >  1:5404546/1‑93 (MQ=255)

                                                                                       gcgcTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATAtt  <  2:2566302/93‑1 (MQ=255)

ACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATT  >  NC_000913/4625115‑4625294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`