BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	772,731	A→G	Y156C (TAC→TGC)	cydB →	cytochrome d terminal oxidase polypeptide subunit II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	772,731	0	A	G	100.0%	684.2 / NA	206	Y156C (TAC→TGC)	cydB	cytochrome d terminal oxidase polypeptide subunit II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/109); total (97/109)

Only 100 of 212 total aligned reads displayed.

GTAGCTTCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTACTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCAA  >  NC_000913/772641‑772820

  tgCTTCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGtgctac                                                                                       <  1:3450907/92‑1 (MQ=255)

     ttCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACAcc                                                                                    <  2:5834442/93‑1 (MQ=255)

        gTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGt                                                                                 <  2:1253824/93‑1 (MQ=255)

         ttCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTa                                                                                >  1:3268355/1‑93 (MQ=255)

          tCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTaa                                                                               <  1:3778224/93‑1 (MQ=255)

          tCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTaa                                                                               >  2:2082555/1‑93 (MQ=255)

           cctacgcTGGTAATTGGTGTAGCGTTCGGTACCCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAAc                                                                              <  1:6308307/89‑1 (MQ=255)

            cgccgcTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAAct                                                                             <  2:641702/93‑1 (MQ=255)

               cgcTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAActtct                                                                          <  1:2284758/93‑1 (MQ=255)

                  tGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTcc                                                                       >  2:5106982/1‑93 (MQ=255)

                  tGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTcc                                                                       <  1:5134840/93‑1 (MQ=255)

                   ggTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCa                                                                      <  1:4098330/93‑1 (MQ=255)

                   ggTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCa                                                                      >  2:3245835/1‑93 (MQ=255)

                   ggTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCa                                                                      >  2:4125096/1‑93 (MQ=255)

                   ggTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTACAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCa                                                                      <  2:347320/93‑1 (MQ=255)

                     tAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGt                                                                    >  1:1734867/1‑93 (MQ=255)

                      aaTTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGtt                                                                   <  1:3294757/93‑1 (MQ=255)

                        ttGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGc                                                                 >  2:4217240/1‑93 (MQ=255)

                         tGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCt                                                                <  2:2545977/93‑1 (MQ=255)

                           gtgtAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTTCTTa                                                              <  1:5598204/93‑1 (MQ=255)

                           gtgtAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTa                                                              >  1:2054394/1‑93 (MQ=255)

                            tgtAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTaa                                                             <  1:1418930/93‑1 (MQ=255)

                              tAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAAcc                                                           <  2:4469847/93‑1 (MQ=255)

                               aGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAAccc                                                          >  2:1395257/1‑93 (MQ=255)

                                gCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCg                                                         <  2:1491204/93‑1 (MQ=255)

                                  gTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGtt                                                       <  2:4319159/93‑1 (MQ=255)

                                  gTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGtt                                                       <  2:5503170/93‑1 (MQ=255)

                                   ttCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTc                                                      <  2:2362943/93‑1 (MQ=255)

                                   ttCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTc                                                      <  2:6175959/93‑1 (MQ=255)

                                      ggTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGc                                                   >  2:5988503/1‑93 (MQ=255)

                                       gTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGcc                                                  >  2:6469013/1‑93 (MQ=255)

                                       gTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGcc                                                  <  2:3881078/93‑1 (MQ=255)

                                       gTAACCTGTTGCAGGGCGTACCGGTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGATGCTTAACCCTTTCggtc                                                  >  1:3895473/1‑91 (MQ=255)

                                        tAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCct                                                 >  1:84793/1‑93 (MQ=255)

                                        tAACCTGTTGCAGCGCGTACGGTTCAGCGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCct                                                 <  2:1063226/93‑1 (MQ=255)

                                         aaCCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCctg                                                >  1:1164940/1‑93 (MQ=255)

                                         aaCCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCctg                                                >  1:4393389/1‑93 (MQ=255)

                                           ccTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCctgct                                              <  1:5428703/93‑1 (MQ=255)

                                            cTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCctgctg                                             >  1:1027823/1‑93 (MQ=255)

                                            cTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCctgctg                                             >  2:6149032/1‑93 (MQ=255)

                                               ttGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCa                                          <  1:129252/93‑1 (MQ=255)

                                               ttGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCa                                          >  1:2641978/1‑93 (MQ=255)

                                                tGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAg                                         <  1:2460564/93‑1 (MQ=255)

                                                tGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAg                                         <  2:5419598/93‑1 (MQ=255)

                                                 gCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAgg                                        <  1:3564640/93‑1 (MQ=255)

                                                     ggCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCgtg                                    <  1:648513/93‑1 (MQ=255)

                                                      gCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCgtgg                                   <  2:6058688/93‑1 (MQ=255)

                                                         tACCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGa                                <  1:380007/93‑1 (MQ=255)

                                                          aCCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAg                               >  1:6079918/1‑93 (MQ=255)

                                                          aCCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAg                               >  2:1121708/1‑93 (MQ=255)

                                                          aCCGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGCGAg                               >  1:478406/1‑93 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              <  2:2165672/93‑1 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              <  2:2672029/93‑1 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              >  2:3691866/1‑93 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              >  1:4617406/1‑93 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              >  2:6324891/1‑93 (MQ=255)

                                                           ccGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGc                              >  1:166561/1‑93 (MQ=255)

                                                            cGTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCg                             >  2:1894856/1‑93 (MQ=255)

                                                             gTTCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGt                            >  1:3667712/1‑93 (MQ=255)

                                                              ttCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGGGTGGTGAGCGtg                           >  2:2002776/1‑92 (MQ=255)

                                                              ttCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTa                           >  1:945557/1‑93 (MQ=255)

                                                               tCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAg                          <  1:4398785/93‑1 (MQ=255)

                                                               tCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAg                          <  2:275962/93‑1 (MQ=255)

                                                               tCAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAg                          <  2:537875/93‑1 (MQ=255)

                                                                cAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAgg                         <  1:2312592/93‑1 (MQ=255)

                                                                cAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAgg                         <  2:3073724/93‑1 (MQ=255)

                                                                cAACGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGGAgg                         >  1:67545/1‑93 (MQ=255)

                                                                 aaCGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAggg                        <  2:2921795/93‑1 (MQ=255)

                                                                  aCGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTACCCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGga                       <  1:1707046/93‑1 (MQ=255)

                                                                  aCGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGga                       >  1:4695481/1‑93 (MQ=255)

                                                                   cGTTGATGAATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGgat                      <  1:3025759/93‑1 (MQ=255)

                                                                      tgatgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGgatgat                   <  1:2772948/93‑1 (MQ=255)

                                                                       gatgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATc                  >  2:4019987/1‑93 (MQ=255)

                                                                       gatgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATc                  <  2:439934/93‑1 (MQ=255)

                                                                       gatgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATc                  >  1:5000758/1‑93 (MQ=255)

                                                                       gatgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATc                  >  2:1725579/1‑93 (MQ=255)

                                                                        atgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCa                 >  1:5550730/1‑93 (MQ=255)

                                                                         tgaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCAt                <  1:5127666/93‑1 (MQ=255)

                                                                          gaATATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCAtt               <  1:6605274/93‑1 (MQ=255)

                                                                           aaTATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTa              <  1:2876709/93‑1 (MQ=255)

                                                                           aaTATCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTa              <  1:4063838/93‑1 (MQ=255)

                                                                            atatCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTAc             >  1:3987840/1‑93 (MQ=255)

                                                                            atatCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTAc             >  1:5495340/1‑93 (MQ=255)

                                                                             tatCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACt            >  1:2567743/1‑93 (MQ=255)

                                                                              atCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTc           <  2:3902479/93‑1 (MQ=255)

                                                                               tCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCa          <  1:802514/93‑1 (MQ=255)

                                                                               tCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCa          <  2:3425113/93‑1 (MQ=255)

                                                                               tCTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCa          <  1:6621005/93‑1 (MQ=255)

                                                                                cTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAg         <  2:2904707/93‑1 (MQ=255)

                                                                                cTGCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGAAGGGATGATCATTACTCAg         <  1:6563445/93‑1 (MQ=255)

                                                                                  gCGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAggg       >  2:4256400/1‑93 (MQ=255)

                                                                                   cGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGgc      <  2:4844466/93‑1 (MQ=255)

                                                                                   cGTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGgc      <  1:5949408/93‑1 (MQ=255)

                                                                                    gTCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGTCTGCTGGCAGGCGTGGTGAGCGTCGGGATGAGCATTACTCACGgcg     >  1:1461114/1‑93 (MQ=255)

                                                                                     tCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGgcgc    >  2:5623766/1‑93 (MQ=255)

                                                                                     tCTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGgcgc    <  1:4475948/93‑1 (MQ=255)

                                                                                      cTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCa   <  2:5595349/93‑1 (MQ=255)

                                                                                      cTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCa   >  1:3566471/1‑93 (MQ=255)

                                                                                      cTGTGCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCa   >  2:826648/1‑93 (MQ=255)

                                                                                       tgtgCTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCaa  >  2:1024668/1‑93 (MQ=255)

GTAGCTTCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTACTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCAA  >  NC_000913/772641‑772820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`