BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	70,940	A→G	Y185C (TAC→TGC)	araC →	transcriptional regulator for ara operon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	70,940	0	A	G	100.0%	790.8 / NA	239	Y185C (TAC→TGC)	araC	transcriptional regulator for ara operon
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (139/100); total (139/100)

Only 100 of 245 total aligned reads displayed.

TGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTT  >  NC_000913/70850‑71029

tGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCa                                                                                         >  2:1589214/1‑93 (MQ=255)

tGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCa                                                                                         >  1:3124625/1‑93 (MQ=255)

  cTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATc                                                                                       >  2:5551797/1‑93 (MQ=255)

   ttGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCa                                                                                      >  1:5886181/1‑93 (MQ=255)

   ttGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCa                                                                                      <  2:798395/93‑1 (MQ=255)

   ttGAGCAAGTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATGATCGGGTACGCGAGGCTTGTCAGTGCATCa                                                                                      <  1:2577534/93‑1 (MQ=255)

       gCAATTGTTACTGCGGCGCATGGAAGGGATTAACGAGTGGCTCCATCCACCGATGGATAATCGGGGACGCGAGGCTTGTCAGTGCATCAGCGa                                                                                  >  1:1023366/1‑93 (MQ=255)

        cAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGAt                                                                                 <  1:4497030/93‑1 (MQ=255)

         aaTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATc                                                                                >  1:2220672/1‑93 (MQ=255)

         aaTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATc                                                                                >  2:2099685/1‑93 (MQ=255)

         aaTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATc                                                                                >  1:2378725/1‑93 (MQ=255)

         aaTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATc                                                                                >  1:1455342/1‑93 (MQ=255)

          aTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCa                                                                               >  1:4454332/1‑93 (MQ=255)

          aTTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCa                                                                               >  1:219537/1‑93 (MQ=255)

           ttGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGCCTTGTCAGCGCATCAGCGATCAc                                                                              >  1:717721/1‑93 (MQ=255)

            tGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCAcc                                                                             >  2:245386/1‑93 (MQ=255)

            tGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCAcc                                                                             <  2:2070583/93‑1 (MQ=255)

             gTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCt                                                                            <  2:5893846/93‑1 (MQ=255)

             gTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCt                                                                            <  1:1543981/93‑1 (MQ=255)

              ttACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTg                                                                           <  1:2817092/93‑1 (MQ=255)

              ttACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTg                                                                           >  2:2370541/1‑93 (MQ=255)

              ttACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTg                                                                           >  2:4046430/1‑93 (MQ=255)

               tACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCtcg                                                                          >  1:1391397/1‑91 (MQ=255)

                tcTGCGGCGCATGGAACGGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGc                                                                         <  1:927420/92‑1 (MQ=255)

                  tGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAg                                                                       >  2:1657158/1‑93 (MQ=255)

                    cggcgCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGAc                                                                     <  1:133950/93‑1 (MQ=255)

                     ggcgCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACa                                                                    <  1:2978806/93‑1 (MQ=255)

                     ggcgCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACa                                                                    <  1:1127223/93‑1 (MQ=255)

                       cgcATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGc                                                                  <  1:6101882/93‑1 (MQ=255)

                       cgcATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGc                                                                  <  2:84139/93‑1 (MQ=255)

                        gcATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGGAGACAGCa                                                                 >  2:1691868/1‑93 (MQ=255)

                           tcgAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAAtt                                                              >  1:5395840/3‑93 (MQ=255)

                           tGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAAtt                                                              <  2:4517086/93‑1 (MQ=255)

                           tGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAAtt                                                              >  1:5002100/1‑93 (MQ=255)

                             gAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAAtttt                                                            >  2:1174286/1‑93 (MQ=255)

                             gAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAAtttt                                                            >  1:3608855/1‑93 (MQ=255)

                              aaGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTg                                                           >  2:3545148/1‑93 (MQ=255)

                               aGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGTAATTTTGa                                                          <  1:6562454/93‑1 (MQ=255)

                               aGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGa                                                          <  1:5753141/93‑1 (MQ=255)

                                gCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGat                                                         <  2:672836/93‑1 (MQ=255)

                                 cGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGata                                                        <  2:5453352/93‑1 (MQ=255)

                                 cGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGata                                                        >  1:4111069/1‑93 (MQ=255)

                                  gATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATAAGCGATCACCTGGCAGACAGCAATTTTGatat                                                       >  1:2130338/1‑93 (MQ=255)

                                   aTTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATc                                                      <  2:4352803/93‑1 (MQ=255)

                                    ttAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCg                                                     >  1:4143690/1‑93 (MQ=255)

                                    ttAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCg                                                     >  1:5246121/1‑93 (MQ=255)

                                     tAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGc                                                    <  2:656938/93‑1 (MQ=255)

                                      aaCGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGcc                                                   <  2:1785865/93‑1 (MQ=255)

                                       aCGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCTCCa                                                  >  2:6350664/1‑93 (MQ=255)

                                       aCGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCa                                                  <  1:6261079/93‑1 (MQ=255)

                                       aCGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCa                                                  >  1:3325673/1‑93 (MQ=255)

                                         gAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGc                                                >  2:2912964/1‑93 (MQ=255)

                                         gAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGc                                                >  2:652011/1‑93 (MQ=255)

                                         gAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGc                                                >  2:4418674/1‑93 (MQ=255)

                                         gAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGc                                                >  2:5785214/1‑93 (MQ=255)

                                          aGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCg                                               <  2:4671716/93‑1 (MQ=255)

                                           gTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGt                                              >  1:5561780/1‑93 (MQ=255)

                                           gTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGt                                              >  2:2665977/1‑93 (MQ=255)

                                           gTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTAGCAGACAGCAATTTTGATATCGCCAGCGt                                              >  1:6598964/1‑93 (MQ=255)

                                                tccatccaCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGcac                                         <  1:2765952/93‑1 (MQ=255)

                                                 ccatccaCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGcaca                                        <  2:3045470/93‑1 (MQ=255)

                                                     ccaCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCAt                                    >  2:1362955/1‑93 (MQ=255)

                                                      caCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATg                                   >  1:2139263/1‑93 (MQ=255)

                                                       aCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGt                                  <  2:4299565/93‑1 (MQ=255)

                                                       aCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGt                                  >  2:3872713/1‑93 (MQ=255)

                                                       aCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGt                                  >  2:3814264/1‑93 (MQ=255)

                                                       aCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGt                                  >  2:1088373/1‑93 (MQ=255)

                                                       aCCGATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGt                                  >  2:2535926/1‑93 (MQ=255)

                                                          gATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTg                               >  1:6648948/1‑93 (MQ=255)

                                                          gATGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTg                               >  1:5972150/1‑93 (MQ=255)

                                                           aTGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGc                              >  1:4760570/1‑93 (MQ=255)

                                                            tGGATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCCCACAGCATGTTTGCt                             <  2:2614191/93‑1 (MQ=255)

                                                              gATAATCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTg                           >  2:4861505/1‑93 (MQ=255)

                                                                 aaTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCg                        >  1:3849220/1‑93 (MQ=255)

                                                                 aaTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCg                        >  2:4004981/1‑93 (MQ=255)

                                                                 aaTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCg                        >  2:1924392/1‑93 (MQ=255)

                                                                  aTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGc                       <  2:4965229/93‑1 (MQ=255)

                                                                  aTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGc                       <  1:110028/93‑1 (MQ=255)

                                                                  aTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGc                       <  2:1282364/93‑1 (MQ=255)

                                                                  aTCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGc                       >  1:3732831/1‑93 (MQ=255)

                                                                   tCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGcc                      >  2:6233867/1‑93 (MQ=255)

                                                                   tCGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGcc                      >  1:1738387/1‑93 (MQ=255)

                                                                    cGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCg                     >  2:3132768/1‑93 (MQ=255)

                                                                    cGGGTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCg                     <  2:5737263/93‑1 (MQ=255)

                                                                     gggTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGt                    <  2:5014131/93‑1 (MQ=255)

                                                                      ggTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTc                   >  2:422060/1‑93 (MQ=255)

                                                                      ggTACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTc                   >  2:6415437/1‑93 (MQ=255)

                                                                        tACGCGAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTcgc                 <  1:2050846/93‑1 (MQ=255)

                                                                          cgcgAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGt               >  1:5670360/1‑93 (MQ=255)

                                                                           acgAGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCCGCGTCGCACAGCATGTTTGCTTGTCGCCGCCGCGTc              <  1:1484943/92‑1 (MQ=255)

                                                                              aGGCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGt           >  1:839833/1‑93 (MQ=255)

                                                                               ggCTTGTCAGTGCATCAGCGATCACCTGTCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTc          <  2:6637315/93‑1 (MQ=255)

                                                                               ggCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTc          >  1:1582639/1‑93 (MQ=255)

                                                                               ggCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTc          >  1:1808999/1‑93 (MQ=255)

                                                                                gCTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTca         >  2:2776077/1‑93 (MQ=255)

                                                                                 cTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTcac        >  2:6494849/1‑93 (MQ=255)

                                                                                 cTTGTCAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTcac        >  1:3886274/1‑93 (MQ=255)

                                                                                  ttGTCAGTGCATCAGCGATCACCTGGAAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATTTTTGCTTGTTGCCGTCGCGTCTGTcaca       >  2:3314083/1‑93 (MQ=255)

                                                                                      cAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCtt   <  2:3576338/93‑1 (MQ=255)

                                                                                      cAGTGCATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCtt   >  1:6052243/1‑93 (MQ=255)

TGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTT  >  NC_000913/70850‑71029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`