BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	827,018	C→T	S396N (AGT→AAT)	ybhF ←	YbhF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	827,018	0	C	T	100.0%	641.2 / NA	173	S396N (AGT→AAT)	ybhF	YbhF
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (90/83); total (90/83)

Only 100 of 198 total aligned reads displayed.

AAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACC  >  NC_000913/826928‑827106

aaaaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttc                                                                                        <  2:449315/93‑1 (MQ=255)

aaaaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttc                                                                                        <  1:4048432/93‑1 (MQ=255)

aaaaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttc                                                                                        <  1:5050694/93‑1 (MQ=255)

aaaaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttc                                                                                        <  1:6641161/93‑1 (MQ=255)

 aaaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttct                                                                                       >  1:1430969/1‑93 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGTCGCGCTTTACCGGAAttctc                                                                                      >  1:705245/1‑93 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  2:2232264/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      >  2:1428831/1‑93 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  2:1061326/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  2:239017/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  1:4126711/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  2:3636410/93‑1 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      >  1:2773860/1‑93 (MQ=255)

  aaaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctc                                                                                      <  1:3347321/93‑1 (MQ=255)

   aaGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAAttctct                                                                                     >  1:3969648/1‑93 (MQ=255)

    aGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCtt                                                                                    <  1:5542265/93‑1 (MQ=255)

     gCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCttt                                                                                   >  1:1135168/1‑93 (MQ=255)

     gCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCttt                                                                                   >  2:2303879/1‑93 (MQ=255)

      cGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTc                                                                                  <  2:4364581/93‑1 (MQ=255)

      cGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTc                                                                                  <  2:3800240/93‑1 (MQ=255)

       gTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCa                                                                                 >  1:3094366/1‑93 (MQ=255)

       gTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCa                                                                                 >  2:3191857/1‑93 (MQ=255)

        tAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAg                                                                                >  1:3453719/1‑93 (MQ=255)

        tAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAg                                                                                >  2:1096513/1‑93 (MQ=255)

          aaTTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGat                                                                              <  2:5270614/93‑1 (MQ=255)

          aaTTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGat                                                                              >  1:6059145/1‑93 (MQ=255)

           aTTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatc                                                                             <  2:4774071/93‑1 (MQ=255)

            ttCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatcc                                                                            <  2:868783/93‑1 (MQ=255)

             tCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatcca                                                                           <  2:3995018/93‑1 (MQ=255)

             tCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatcca                                                                           <  1:4541832/93‑1 (MQ=255)

              cTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatccat                                                                          >  2:1939665/1‑93 (MQ=255)

              cTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGatccat                                                                          <  1:2994837/93‑1 (MQ=255)

                     aCCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCTATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGc                                                                   <  2:4117204/93‑1 (MQ=255)

                       cGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCAc                                                                 >  1:989417/1‑93 (MQ=255)

                        gTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCATATCCATCCCCAGCAcc                                                                >  1:6431348/1‑93 (MQ=255)

                        gTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCAcc                                                                <  2:1380370/93‑1 (MQ=255)

                        gTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCACCAGCAcc                                                                >  1:1616661/1‑93 (MQ=255)

                          cAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAg                                                              <  2:1724328/93‑1 (MQ=255)

                           aGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgc                                                             <  2:6188241/93‑1 (MQ=255)

                           aGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgc                                                             <  2:1607907/93‑1 (MQ=255)

                            ggTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcg                                                            >  2:5698177/1‑93 (MQ=255)

                            ggTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcg                                                            >  2:3250342/1‑93 (MQ=255)

                            ggTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcg                                                            >  2:1805234/1‑93 (MQ=255)

                            ggTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAgcc                                                            >  2:1542920/1‑92 (MQ=255)

                              ttACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCCCCAGCGcc                                                          <  1:6571798/93‑1 (MQ=255)

                              ttACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGcc                                                          >  2:299581/1‑93 (MQ=255)

                              ttACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGcc                                                          <  2:685952/93‑1 (MQ=255)

                               tACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCt                                                         <  1:313015/93‑1 (MQ=255)

                               tACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCt                                                         <  1:1159501/93‑1 (MQ=255)

                               tACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCt                                                         >  2:5979792/1‑93 (MQ=255)

                                aCCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTg                                                        <  1:3176360/93‑1 (MQ=255)

                                 ccGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTgg                                                       >  2:6489114/1‑93 (MQ=255)

                                 ccGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTgg                                                       >  2:269700/1‑93 (MQ=255)

                                   gTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGcc                                                     >  2:2820732/1‑93 (MQ=255)

                                   gTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGcc                                                     >  1:212099/1‑93 (MQ=255)

                                     agagCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCgg                                                   >  1:1788050/1‑93 (MQ=255)

                                       agCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGaa                                                 <  1:2241914/93‑1 (MQ=255)

                                       agCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGaa                                                 <  2:4636490/93‑1 (MQ=255)

                                          gAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTc                                              <  2:3272905/93‑1 (MQ=255)

                                             aaTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGc                                           <  2:6080519/93‑1 (MQ=255)

                                              aTTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCa                                          <  2:5613401/93‑1 (MQ=255)

                                               tttttGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCAc                                         <  1:5162258/93‑1 (MQ=255)

                                                 tttGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCa                                       <  2:732959/93‑1 (MQ=255)

                                                       ccATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAc                                 >  1:2955166/1‑93 (MQ=255)

                                                       ccATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAc                                 <  2:5469467/93‑1 (MQ=255)

                                                        cATATAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAAcc                                >  2:428432/1‑93 (MQ=255)

                                                         atatAGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCg                               >  1:2642953/1‑93 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCATActgt                              >  1:4772782/1‑90 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                              >  2:3049211/1‑93 (MQ=255)

                                                          tataGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGc                              <  2:4753080/93‑1 (MQ=255)

                                                            taGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGcac                            <  1:3049214/93‑1 (MQ=255)

                                                             aGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGcaca                           >  2:5135360/1‑93 (MQ=255)

                                                             aGCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGcaca                           <  2:6594582/93‑1 (MQ=255)

                                                              gCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcat                          >  2:375930/1‑93 (MQ=255)

                                                              gCCGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcat                          >  1:4715331/1‑93 (MQ=255)

                                                               ccGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatc                         >  1:134088/1‑93 (MQ=255)

                                                               ccGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatc                         <  2:3383736/93‑1 (MQ=255)

                                                               ccGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatc                         <  1:1242235/93‑1 (MQ=255)

                                                                cGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatca                        <  1:3190692/93‑1 (MQ=255)

                                                                cGAGATGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatca                        >  1:2636901/1‑93 (MQ=255)

                                                                 gagaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCAcatcat                       >  1:3831677/1‑93 (MQ=255)

                                                                  agaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACatcatc                      <  2:4912073/93‑1 (MQ=255)

                                                                  agaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACatcatc                      <  1:2004043/93‑1 (MQ=255)

                                                                   gaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCt                     <  1:3645317/93‑1 (MQ=255)

                                                                   gaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCt                     <  2:2558549/93‑1 (MQ=255)

                                                                   gaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCt                     >  1:1722113/1‑93 (MQ=255)

                                                                   gaTGCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCt                     >  1:1931012/1‑93 (MQ=255)

                                                                      gCTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTaa                  <  1:5283055/93‑1 (MQ=255)

                                                                       cTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTaaa                 <  1:1071758/93‑1 (MQ=255)

                                                                       cTGGCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTaaa                 <  1:5894780/93‑1 (MQ=255)

                                                                         ggCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAgg               <  1:5425334/93‑1 (MQ=255)

                                                                         ggCGCGCTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAgg               >  1:2445189/1‑93 (MQ=255)

                                                                          gcgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggt              <  1:286214/93‑1 (MQ=255)

                                                                          gcgcgcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAggt              <  1:3773671/93‑1 (MQ=255)

                                                                              gcTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTc          >  2:431314/1‑93 (MQ=255)

                                                                               cTTTACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCg         >  1:6264213/1‑93 (MQ=255)

                                                                                tttACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGa        >  1:4591374/1‑93 (MQ=255)

                                                                                 ttACCGGAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGAt       <  2:4229151/93‑1 (MQ=255)

                                                                                      ggAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAcc  <  2:3768312/93‑1 (MQ=255)

                                                                                      ggAATTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTAcc  >  2:1252319/1‑93 (MQ=255)

AAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCGGAACTCTCTTTCAGATCCATCCCCAGCACCAGCGCCTGGCCGGAAGTCGGCACCAGCAAACCGCACATCATCTTAAAGGTGGTCGATTTACC  >  NC_000913/826928‑827106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`