BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	888,315	C→T	G243D (GGC→GAC)	b0847 ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	888,315	0	C	T	100.0%	854.0 / NA	229	G243D (GGC→GAC)	b0847	putative transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (105/124); total (105/124)

Only 100 of 239 total aligned reads displayed.

ACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888225‑888404

aCCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCg                                                                                         <  2:3108019/93‑1 (MQ=255)

 ccAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCgg                                                                                        <  1:6679608/93‑1 (MQ=255)

 ccAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCgg                                                                                        >  1:4528820/1‑93 (MQ=255)

   aaCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGtt                                                                                      <  1:1008662/93‑1 (MQ=255)

    aCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGttt                                                                                     >  1:5639676/1‑93 (MQ=255)

    aCGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGttt                                                                                     <  2:6638284/93‑1 (MQ=255)

        tATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCg                                                                                 <  2:3377272/93‑1 (MQ=255)

         aTTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGa                                                                                >  2:2407297/1‑93 (MQ=255)

         aTTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGa                                                                                <  2:3681822/93‑1 (MQ=255)

          tttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               <  1:6072380/93‑1 (MQ=255)

          tttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               >  2:6706088/1‑93 (MQ=255)

          tttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGAt                                                                               >  2:6105448/1‑93 (MQ=255)

           ttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATa                                                                              <  2:3986191/93‑1 (MQ=255)

           ttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATa                                                                              <  2:4592037/93‑1 (MQ=255)

           ttCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCCATa                                                                              >  1:1431962/1‑93 (MQ=255)

             cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            <  1:3906661/93‑1 (MQ=255)

             cATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaa                                                                            >  2:1820736/1‑93 (MQ=255)

              aTCGCGCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAAt                                                                           >  1:4340597/1‑93 (MQ=255)

              aTCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATaaaa                                                                           >  2:1174347/1‑92 (MQ=255)

              aTCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAAt                                                                           <  1:4101559/93‑1 (MQ=255)

               tCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATa                                                                          <  1:2628934/93‑1 (MQ=255)

               tCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATa                                                                          <  2:5876686/93‑1 (MQ=255)

               tCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTACAATGTAGCAGTCGGTTTGTCGATAAATa                                                                          >  1:2700765/1‑93 (MQ=255)

                cGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAc                                                                         <  2:4254030/93‑1 (MQ=255)

                 gCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAcc                                                                        >  1:4675708/1‑93 (MQ=255)

                 gCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATAcc                                                                        >  2:4469086/1‑93 (MQ=255)

                   ccATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCa                                                                      <  1:179361/93‑1 (MQ=255)

                    cATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAg                                                                     <  1:159305/93‑1 (MQ=255)

                    cATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAg                                                                     >  2:6030543/1‑93 (MQ=255)

                    cATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAg                                                                     <  1:4139062/93‑1 (MQ=255)

                    cATTTGTAGCACGGAATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTGAATGTAGCAGTCGGTTTGTCGATAAATTCCCAg                                                                     <  1:6280476/93‑1 (MQ=255)

                     aTTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGt                                                                    >  2:538208/1‑93 (MQ=255)

                      tttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGtt                                                                   >  2:5596356/1‑93 (MQ=255)

                       ttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTc                                                                  <  1:5920914/93‑1 (MQ=255)

                       ttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTc                                                                  <  2:892145/93‑1 (MQ=255)

                       ttGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTc                                                                  <  1:5070102/93‑1 (MQ=255)

                          tAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACg                                                               >  1:1164687/1‑93 (MQ=255)

                              aCGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGa                                                           <  2:1682266/93‑1 (MQ=255)

                              aCGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGa                                                           <  1:725972/93‑1 (MQ=255)

                               cGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAt                                                          <  1:982671/93‑1 (MQ=255)

                                ggCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtt                                                         <  2:634678/93‑1 (MQ=255)

                                cgCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtt                                                         <  2:348541/92‑1 (MQ=255)

                                  cATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtttt                                                       <  1:5739564/93‑1 (MQ=255)

                                  cATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGAtttt                                                       <  1:3234905/93‑1 (MQ=255)

                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  1:4704211/1‑93 (MQ=255)

                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     >  2:6238662/1‑93 (MQ=255)

                                    tCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTg                                                     <  1:3744598/93‑1 (MQ=255)

                                     cACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGc                                                    >  1:916454/1‑93 (MQ=255)

                                     cACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGc                                                    <  1:4456370/93‑1 (MQ=255)

                                      aCCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGGTTGTCGATAAATACCCAGTTCACGCAGATTTTTGcc                                                   >  2:4305290/1‑93 (MQ=255)

                                         gTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTc                                                <  1:3608339/93‑1 (MQ=255)

                                         gTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTc                                                >  2:2025102/1‑93 (MQ=255)

                                         gTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTc                                                <  2:1943999/93‑1 (MQ=255)

                                         gTCTGGATATGCCAGAAGCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATCCCCAGTTCACGCAGATTTTTGCCGTc                                                <  2:608669/93‑1 (MQ=255)

                                          tCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCg                                               >  1:3160816/1‑93 (MQ=255)

                                            tGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGt                                             >  2:4904057/1‑93 (MQ=255)

                                             ggATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTc                                            >  2:2873649/1‑93 (MQ=255)

                                                tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         >  1:3871916/1‑93 (MQ=255)

                                                tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         >  2:1355069/1‑93 (MQ=255)

                                                tttGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAg                                         <  1:952566/93‑1 (MQ=255)

                                                   gCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGcc                                      <  2:3768702/93‑1 (MQ=255)

                                                    ccAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATGAATACCCAGTTCACGACGATTTTTTCCGGCGGTCCAGGcca                                     >  1:3944705/1‑93 (MQ=255)

                                                      aGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacc                                   >  1:6588497/1‑93 (MQ=255)

                                                      aGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacc                                   >  2:501217/1‑93 (MQ=255)

                                                      aGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacc                                   >  1:6038202/1‑93 (MQ=255)

                                                       gAATCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGccacca                                  >  1:186626/1‑93 (MQ=255)

                                                        aaTCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTTCCGTCGGTCCAGGCCACCAg                                 >  1:5237070/1‑93 (MQ=255)

                                                         aTCCCGTTCCGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGt                                >  1:6521342/1‑93 (MQ=255)

                                                         aTCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGt                                <  2:1232597/93‑1 (MQ=255)

                                                          tCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGtt                               <  2:250507/93‑1 (MQ=255)

                                                          tCCCGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTCCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGtt                               >  1:2977075/1‑93 (MQ=255)

                                                           cccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTc                              >  1:6246630/1‑93 (MQ=255)

                                                           cccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTc                              <  1:6044978/93‑1 (MQ=255)

                                                            ccGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTcc                             >  1:5505526/1‑93 (MQ=255)

                                                             cGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCg                            >  1:443286/1‑93 (MQ=255)

                                                             cGTTACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCg                            <  2:200875/93‑1 (MQ=255)

                                                               ttACGTCGAATACGTTCAATGTATCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCggg                          >  2:3459493/1‑93 (MQ=255)

                                                                tACGTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGc                         <  1:5351200/93‑1 (MQ=255)

                                                                   gTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGa                      >  1:4444940/1‑93 (MQ=255)

                                                                   gTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGa                      <  2:5473973/93‑1 (MQ=255)

                                                                   gTCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGa                      >  1:4862843/1‑93 (MQ=255)

                                                                    tCGAATACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGAc                     >  2:2186361/1‑93 (MQ=255)

                                                                        aTACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGa                 >  2:6414400/1‑93 (MQ=255)

                                                                         tACGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGAt                >  1:2366045/1‑93 (MQ=255)

                                                                           cGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAg              <  1:4991472/93‑1 (MQ=255)

                                                                           cGTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAg              <  1:846036/93‑1 (MQ=255)

                                                                            gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             <  1:1548613/93‑1 (MQ=255)

                                                                            gTTCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAgg             >  2:1803558/1‑93 (MQ=255)

                                                                             ttCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAggg            >  2:5087806/1‑92 (MQ=255)

                                                                             ttCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgc            >  1:2247904/1‑93 (MQ=255)

                                                                              tCAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcg           <  2:5945591/93‑1 (MQ=255)

                                                                               cAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcgc          <  1:4383854/93‑1 (MQ=255)

                                                                               cAATGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGgcgc          >  1:4256021/1‑93 (MQ=255)

                                                                                 aTGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCgg        >  2:6594643/1‑93 (MQ=255)

                                                                                 aTGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCgg        >  2:1341716/1‑93 (MQ=255)

                                                                                  tGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGa       <  1:2400468/93‑1 (MQ=255)

                                                                                  tGTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGa       >  1:455705/1‑93 (MQ=255)

                                                                                   gTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGAt      <  1:480706/93‑1 (MQ=255)

                                                                                   gTAGCAGTCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGAt      <  1:1202320/93‑1 (MQ=255)

                                                                                      gcagtCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCAc   <  1:5891316/93‑1 (MQ=255)

ACCAACGCTATTTCATCGCCCATTTGTAGCACGGCATCACCGTCTGGATTTGCCAGAATCCCGTTACGTCGAATACGTTCAATGTAGCAGCCGGTTTGTCGATAAATACCCAGTTCACGCAGATTTTTGCCGTCGGTCCAGGCCACCAGTTCCGGGCCGACGCGATAGGCGCGGATCACC  >  NC_000913/888225‑888404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`