BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	968,384	T→C	S266P (TCT→CCT)	ycaH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	968,384	0	T	C	99.5%	709.6 / ‑6.9	216	S266P (TCT→CCT)	ycaH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (108/106); minor base G (0/1); total (109/107)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 222 total aligned reads displayed.

GCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTT  >  NC_000913/968294‑968473

gCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCt                                                                                         <  1:6415327/93‑1 (MQ=255)

gCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCt                                                                                         <  1:2225948/93‑1 (MQ=255)

 cGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCtt                                                                                        >  1:82193/1‑93 (MQ=255)

  ggggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCttt                                                                                       >  1:5438558/1‑93 (MQ=255)

  ggggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCttt                                                                                       >  1:777073/1‑93 (MQ=255)

   gggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTg                                                                                      <  2:4627093/93‑1 (MQ=255)

    ggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGa                                                                                     >  1:141751/1‑93 (MQ=255)

    ggATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGa                                                                                     <  2:2703716/93‑1 (MQ=255)

      aTTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAAc                                                                                   <  2:778465/93‑1 (MQ=255)

      aTTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAAc                                                                                   <  2:3618448/93‑1 (MQ=255)

       ttGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAAcc                                                                                  <  2:4493225/93‑1 (MQ=255)

        tGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCa                                                                                 >  2:137866/1‑93 (MQ=255)

         ggccATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCAt                                                                                <  1:5353463/90‑1 (MQ=255)

          ggCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATg                                                                               <  2:3493047/93‑1 (MQ=255)

            cATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCg                                                                             <  2:1578425/93‑1 (MQ=255)

             aTCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCGGATCATCAGCCTTTGAACCATgggg                                                                            <  1:5934417/93‑1 (MQ=255)

             aTCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCgg                                                                            >  2:2193673/1‑93 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           >  2:6619184/1‑93 (MQ=255)

              tCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGa                                                                           <  1:1984297/93‑1 (MQ=255)

               ccgccgCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGAt                                                                          <  1:6642326/93‑1 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     <  2:1320503/93‑1 (MQ=255)

                    gcgcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAg                                                                     >  1:2098278/1‑93 (MQ=255)

                      gcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTg                                                                   >  2:47013/1‑93 (MQ=255)

                      gcTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTg                                                                   >  1:2686102/1‑93 (MQ=255)

                       cTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTgg                                                                  >  2:1149784/1‑92 (MQ=255)

                       cTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATAATCAGCCTTTGAACCATGCGGCTGTCAGTgg                                                                  >  2:2278772/1‑92 (MQ=255)

                        ttttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCg                                                                 >  2:6698919/1‑93 (MQ=255)

                        ttttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCg                                                                 >  2:2480950/1‑93 (MQ=255)

                         tttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGt                                                                <  1:2118162/93‑1 (MQ=255)

                          ttttGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGtt                                                               <  1:1321711/93‑1 (MQ=255)

                             tGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGt                                                            <  1:1617499/93‑1 (MQ=255)

                              gCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTa                                                           <  2:3117020/93‑1 (MQ=255)

                                cACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAg                                                         <  1:3167146/93‑1 (MQ=255)

                                cACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAg                                                         >  1:2371081/1‑93 (MQ=255)

                                  cGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAgcg                                                       <  1:4017921/93‑1 (MQ=255)

                                   gCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAgcgc                                                      <  2:211365/93‑1 (MQ=255)

                                    cTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGcc                                                     <  2:736828/93‑1 (MQ=255)

                                     tGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCg                                                    <  2:4218430/93‑1 (MQ=255)

                                     tGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCg                                                    >  2:1077256/1‑93 (MQ=255)

                                       aaGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCggg                                                  >  1:1341981/1‑93 (MQ=255)

                                        aGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGc                                                 >  1:5045382/1‑93 (MQ=255)

                                         gATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCa                                                >  1:2175460/1‑93 (MQ=255)

                                         gATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCa                                                >  2:121742/1‑93 (MQ=255)

                                         gATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCa                                                <  1:2593034/93‑1 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              <  2:4965708/93‑1 (MQ=255)

                                           tgtgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCaaa                                              >  1:279276/1‑93 (MQ=255)

                                             tgtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACg                                            >  1:1120851/1‑93 (MQ=255)

                                              gtgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGc                                           <  2:6061528/93‑1 (MQ=255)

                                               tgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCt                                          <  2:4149072/93‑1 (MQ=255)

                                               tgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCt                                          <  1:1859353/93‑1 (MQ=255)

                                               tgGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCt                                          <  1:3270833/93‑1 (MQ=255)

                                                   gTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTa                                      <  2:837011/93‑1 (MQ=255)

                                                   gTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTa                                      >  2:5610455/1‑93 (MQ=255)

                                                   gTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTa                                      <  1:4334852/93‑1 (MQ=255)

                                                   ctACAACCGGAAAAATATGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTa                                      <  1:2947780/92‑1 (MQ=255)

                                                    tACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTat                                     >  1:3205694/1‑92 (MQ=255)

                                                    tACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTaa                                     <  2:3596005/93‑1 (MQ=255)

                                                     aCAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAAt                                    >  2:3277799/1‑93 (MQ=255)

                                                      cAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATg                                   <  1:3509448/93‑1 (MQ=255)

                                                         ccGGAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGGAATGACt                                >  2:2405563/1‑93 (MQ=255)

                                                           ggAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGa                              >  2:4988660/1‑93 (MQ=255)

                                                            gAAAAATGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGTCGGGCAAACGCTGGTAATGACTGaa                             >  2:6480179/1‑93 (MQ=255)

                                                              aaaaTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaaaa                           <  1:2513952/93‑1 (MQ=255)

                                                               aaaTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaaaaa                          <  1:2404634/93‑1 (MQ=255)

                                                               aaaTGTGTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGaaaaa                          <  1:6114253/93‑1 (MQ=255)

                                                                 aTGTGTACCGCTGGCCGATCATCAGCATTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGa                        <  1:3130785/93‑1 (MQ=255)

                                                                  tgtgTACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGAt                       >  1:2153237/1‑93 (MQ=255)

                                                                    tgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGc                     <  2:5454009/93‑1 (MQ=255)

                                                                    tgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGc                     >  2:5109988/1‑93 (MQ=255)

                                                                    tgtACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGc                     <  1:1215602/93‑1 (MQ=255)

                                                                      tACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCgg                   >  1:6348723/1‑93 (MQ=255)

                                                                      tACCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCgg                   <  1:891931/93‑1 (MQ=255)

                                                                       aCCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCggg                  >  1:5559879/1‑92 (MQ=255)

                                                                       aCCGCTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGt                  <  1:2491211/93‑1 (MQ=255)

                                                                           cTGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGaaa              <  1:71341/93‑1 (MQ=255)

                                                                            tGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAACCGCTGGTAATGACTGAAAAAGATGCGGTGAAAt             >  2:6395878/1‑93 (MQ=255)

                                                                            tGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAAt             >  1:2299657/1‑93 (MQ=255)

                                                                            tGGCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAAt             >  2:428944/1‑93 (MQ=255)

                                                                             ggCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAATGCTGGTAATGACTGAAAAAGATGCGGTGAAATg            >  2:2836945/1‑93 (MQ=255)

                                                                             ggCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGCCAAACGCTGGTAAGGACTGAAAAAGATGCGGTTAAATg            >  2:1893448/1‑93 (MQ=255)

                                                                              gCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGc           >  1:1150487/1‑93 (MQ=255)

                                                                              gCCGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGc           <  1:4089474/93‑1 (MQ=255)

                                                                                cGATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCg         <  2:1730347/93‑1 (MQ=255)

                                                                                 gATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCgg        >  1:5677677/1‑93 (MQ=255)

                                                                                 gATCATCAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCgg        >  1:4907099/1‑93 (MQ=255)

                                                                                  atcatcAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCggg       <  2:3833923/93‑1 (MQ=255)

                                                                                  atcatcAGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCggg       >  1:1594695/1‑93 (MQ=255)

                                                                                  atcatcAGCCTTTGAACCATGCGGACGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCggg       >  1:4411858/1‑93 (MQ=255)

                                                                                   tcatcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGc      <  1:476056/93‑1 (MQ=255)

                                                                                   tcatcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGc      >  1:1937384/1‑93 (MQ=255)

                                                                                    catcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGcc     <  1:417776/93‑1 (MQ=255)

                                                                                    catcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGcc     >  1:241792/1‑93 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGGCTGAAAAAGATGCGGTGAAATGCCGGGCCtt   <  2:5728790/93‑1 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   >  2:2382339/1‑93 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   >  1:1769946/1‑93 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   <  1:273076/93‑1 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   <  2:6179783/93‑1 (MQ=255)

                                                                                      tcaGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCtt   >  1:4579788/1‑93 (MQ=255)

                                                                                       caGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCttt  <  2:5269672/93‑1 (MQ=255)

                                                                                       caGCCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCttt  <  2:881447/93‑1 (MQ=255)

GCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTT  >  NC_000913/968294‑968473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`